Os02g0179900
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Contents
Annotated Information
Function
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Expression
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Evolution
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References
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Structured Information
| Gene Name |
Os02g0179900 |
|---|---|
| Description |
Similar to Negative elongation factor E (NELF-E) (RD protein). Splice isoform 2 |
| Version |
NM_001052622.1 GI:115444614 GeneID:4328504 |
| Length |
8358 bp |
| Definition |
Oryza sativa Japonica Group Os02g0179900, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 2:4440183..4448540 |
| Sequence Coding Region |
4446958..4447430,4447548..4447723,4447911..4448173 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008395:4440183..4448540 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008395:4440183..4448540 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atgatggttgccaggttgcttagcttggaagaggctgagaaggaacgagtatatgagaaggacgcgggcattaaatatggacaaggagaatcgcatagaactggaagagatgacattgctgtgaatgctcgtaatgcttctagacctggagaaggtactgatagtggtgaatcagacatgttgggtctctctcattatgctatggaagcagggtacaaacgctctaatgaatccacacccgctgaacctgttccaagcaagaagccaaaagttgaccctgttttgcccgcttcaaaatggagtcgagaggatgatgtcagcgatgatgaagatagaaaaggtggcagaggcttaggattaagctattcatctggtagcgatattgctggtgattctgggaaagctgatgcaacagaagttagtactgatcactcgaatcatcaccaggatacgattcttgatgaagagcatagaaagaagttaaggcagattgaaattgctgttatgcagtatcgtgaatctcttgaggagaagggtttgcgaaacacagaagagattgagaagaaggttgccagccaccgtaggcgtcttcagtctgaatatggtttatcattttcaaatgatggtgcaaacagcaggcgctcttctgagaggacatcgtcggagcggagagataggcatgatgattcttcaagaaagcgtcatcgaagcctgagcaggagccgtagtcctccaaggagatcactggaaagagatcgagagcacaatcgcaacagagacacagacagatctcatggtaatgatgctggacgagagagagacagggtacgtgaaaaaagcgcaagccgagggagggatgatcactatgatagaagcagagacagggagaaggacaggagaaagggaaggtga</cdnaseq> |
| Protein Sequence |
<aaseq>MMVARLLSLEEAEKERVYEKDAGIKYGQGESHRTGRDDIAVNAR NASRPGEGTDSGESDMLGLSHYAMEAGYKRSNESTPAEPVPSKKPKVDPVLPASKWSR EDDVSDDEDRKGGRGLGLSYSSGSDIAGDSGKADATEVSTDHSNHHQDTILDEEHRKK LRQIEIAVMQYRESLEEKGLRNTEEIEKKVASHRRRLQSEYGLSFSNDGANSRRSSER TSSERRDRHDDSSRKRHRSLSRSRSPPRRSLERDREHNRNRDTDRSHGNDAGRERDRV REKSASRGRDDHYDRSRDREKDRRKGR</aaseq> |
| Gene Sequence |
<dnaseqindica>6776..7248#7366..7541#7729..7991#gggtttagagaggcaacaaaaatcagtaggtcgtcccagggcagggccttgctccgatccccaatccgtccctcgagcgagcagaggcgccgccgtcgctcatcctgctgcttccgccgccaccgccgccgccgcctgcgccgatccccatccatcccgcaagcgagcatcctggttagcacatcctctttcccatctctctcgacccacgcactttttttttttatcgaatttgcgttaaccctagctcctgttctagaaatttgccttaaccttaatactactaataacagtttgtttgttcccaaaaagtttgggggttgaactgaatgaacccccatgtcccatgttagatccgcccatggcatgcagggtggtagagtaataagattttcaagtgcttgctactcatattctgatgatctgttgataattttatgttaggattaggatgagttcgaagaaggttccattccaccgacataaggagaacgaagaggcgaggaagaaggtaagggttttcaaatctctttctggagacacctctacttatacttttttgcacgcacattctatccatatctgattttaactgcttctgatctgtgtagagagagcaagatgaagcggcacgtgtgtacgaggaatttgtggagtcattcaagggtgatagcacatctgggtcgaagtttgtccgaggaggtgtgattgatcccaatgccaagctgaggattgattccgaaggttagtgatatggtttacattttcatataccttgttgtagttggctttactctttgtagattgaaaatcatgatggatatatacattgtttcttctattgctccaattaatcaagagaccggcctttttattcattcggcaatggcaggtggaaagtccaaagatggggggtctgttccaaagaagggcagtaggtaaacgaaaaaaaatacttgatttctagaagagggtatcttgtggtaccgctgcttcatcttagatggccatatggccaatataatcggaatccagaggccaaccacgagcattaaatgattcatgctatattttttcaccattttacttttcgctagcatcatggttttgtgaattgtctgcttatgtatctacaaagttgataccaactattgaatgcgtttgatagacacgagggttgtacaaatttctgcttgacaaaacgcattcaaacgcattcaataattattccagtaagtaaataattttgcttgactaattgcttgtggactgtatggaaaagcacacagatagccatatttccatctagtgaagtgtaaataattttgggatgacttttacttgtctgacatataaggataatgatggctcatgttatatgttttcttaaaagcatttccaaattcatcatacttcgttccttcgggaagaagtttcagttatcagtgaagctgactataacttttagaatcttaaaagaggtcttagaatattatgatttacatgtgctgagcaactggtatatttagtactacatccgtcctgaaatgtagctatttctaccacaccctctcaaccaatcacaaccattctccatttaatttcttcacctactttctcttctcaaccaatcacaaacttccttcaatcatttctacctacttccttaatacccgtgcccacctaaaaaaatgctacgtaacattttggggtggaggaagtagggttgtttttagtaatcctctttctctctctcctctgaaaccattatctaactaactaactaactttatttagttagatttatggagtttttactaattccatattttcatcaacgtttctgctgttatttctccaaaacaagatgatctgaactattttcgtccagaagttgaaaaatgtgcatgcttgtgaaaacctatggcatggcaaggatgaaaggagccttagttttgtaatactccgtatttggattcctcttgtgcaatcatgctagtataagtcagaatttccattaaatcattgcaggcagtcgagtgtaagctttatgattaactgaacgttctatatagtttcttggttaacatgattttagaaagagaatttgtgaaagtatagcaaaggtgaaaagtacagctatttgtcaagaaagctgtagggttattagcaactcaccatgctggccatttgggcacactgcttgattctgttttctttttcatatacccgtgtcatctaggtgtatacatgatagataccttatacgtagcgtacttttatccaggtatgttccatcttttttgccgccgtcatttgggaaagagccggacaaaaaggttagtacaattccaatattcttatggctgtctcagtagtcactatggttttctggttaagcattatcttgctgtgcagaaagaagaggagcgtccaaaggaaaaggaaagacgaaagccacgggtaatagacgagttcatggaggagctcaagtttgagaaagagcttcgacaaaagcgtaatcaggaacgcgagcaatggcgtgagggtcgacacactgacacatctgctgtacgcacttcagtatttgacagaataggcctttatttacttgcactagacagcactccaaaagaacttcggagtgctttagatcatgtttagtttgttggctagcattaatgcccattagttagtaacctatatatgtactataggacccaaaacaaaagagcaaaaatacaactttcctcaaatatgaaaaaaatatacctgatcacatgatatcagttagtaacctatatatggacacctgcaaaaaaacaccccttgtttttaaaacaaagattgcagtgctttcacatatatggccacagaagatcctctggggtagggggaatgaggtgtagaacacaccatcatccccaactcctctttttagaagagtaaagatgatgaaatattcttttttttaattgcctaggttgtagaacgctgtttttttcctgtctgcactctataactgtttttttaatataatacgagtagttaataaagaaaaataatgatttcttgcagttttttctgtagaaatctttgtggcattattaatagtttgctatttattaattgatgcctgttactgtgtcctgcagtcctctagccgttttgatgaactaccagatgaattagatcccattgggaaacttccaggatcatttgatgatggggatccacaaaccacgaacttatatgttgggaatctttctcctaaggttggcattctccaatgcgcttgttttgtttatacataaggttaactttacatcatgattaacttgatggttgcattatattatatgacaggtggacgagaattttcttatgaggacatttggtcgttttggacctattgctagtgtcaagattatgtggcctcgaacagaagaggaacgcagaaggcaaagaaattgtggttttgttgccttcatgaatagggctgatggacaagcagccaaggatgaaatggaaggtaatacattttcatgtagtgcagggatcatttttgtccatttgtacaggagctagcactcttgctttcagtggtcttgttttttataatcttatggttcatctcaggtgttgttgtgtacgactatgaactgaaactagggtggggcaaatctgttgctcttccttcacaagcactgcctgctcctccaccagggcacatggcaatccggaataaggaggtgctttgtttgttcttttgcgttgtgtcaaagtttctatgttgagataaccttttattattggtgctgcctgcatgagttggcattgattaccttactcttatatttatatagggtggtactgtcatcttatctggtcctggtggtccacctcttgcatctgttaaaccacagacctcagagctggtaggggatcttttcttactgcagctgtttattgtcacgaaatgcctttcttttgtgctttactgatttgtaatattggcaaagtgcatctatccttgactccttgttgtctttgtatttttgctttgatgaatctttaatggatgaacttttaacaaatcaagatacactgctttccatttgatttctttttctgaatgttttaagtgcttgagtctagtatagaccaataaaaacatttaccacttcccttgtggtgtacagattactatatggaatatccttccatctttccccactcacatcatttatgtaggcctttccattgtgatagcgatccttgtattctattcaactttgttggttatgttctttatttacatgccagccaccaacagaaggcaccattcgtatttgcactggttgttctaaccaattacaaaaatgagtgctaagtatggtttttttgcaggttatcgaactaatatttgctataaccaaaaaaagaaaaaaagcttaactgatcataagatggagaatacaatcagtttttatcaaatatatttaatgatgttatcatgattagattttaatatctgtgaataaatccctccacagagacaaaagtggatgctaagggacagaacaattgtagtcaaaggaatgataaaaaaagaggtgttagggcctgccttatcacttaaaaaaaatgctaagatactttgcttcaagccttaaatttaactcaagtaggcattgcaagtggttctgtcttggatgaggatatctgcagttagcttgaaattgaatgatatctaataagttttaaccaacattttggttattattctaatttcatttggtttaacaggtcctcacaccaaatgttcctgatatagtggttgctccgccagatgatgcacatgttcggcatgtgattgacacaatggctctgcatgtacttgacgggggatgtgcttttgaacaagctgttatggagagaggccgaggaaattctttatttagtttcttgtttgatcttaaatcaaaggagcacacatactatgtttggaggctatactcatttgctcaggtaaaatacattgatgttgttaaattttcaatctctatatctatgatctactaaagggaagtggtgatagtattttgttggaagtgaactgtgatagtaaagaggtttgtcttaattgctgtcttctgatatcttttatgcaatgcagatttatcattgagtttccactatatatgttttggaatacaaaaatctaatagcaaaaatgaaaattcttttagtttgaataaatttatttatctttgtcacttatcggagttcttgttagaatttttttttgttctcctagagttggacttgaaatgatcttcttttgcacctagccacttatcacttgtgttttgcatctatgcattattctgaatgtcaattgttgaagtgataggatggtagcattaactgcatatggtgatattggaatgcagggtgatactttgcagcggtggagaacagaaccatttatcatgattacaggaagtggaaggtaagagagatcacacaattatatttttattccaatatgtattggtcatgcgtccgcccattgaatacgtaatgccatgatattgtattaaatatgatattcatattccagatgggttccacctgctttgccatccagcagaagtcctgagcgtgaaaaagaatctacttttgcggctggtagaagcagggtaagagattgctgcattttgttgaaggccttttgctttgttacggtgaatgtttttgtcctactacaaatacgaattcacattttctcttcagcgtgtcgaagtggagcgcacattgactgattcacagcgtgatgaatttgaggacatgctacgtgcattgacattggagagaagtcagataaaggaggctatgggatttgcattggataatgctgatgcagctggagaggtaaatccttccttgcgctagatttgacttgatcagtcaatttctccctttctttctttatttttaaataaggatgtattatttcattcttgtttaggttgccttcttcttgttctttttttgttttagattttttataaaacaccctttttttggtaaatcacataacatgagagtactcattagtgctttgccttgtatgttcagattgttgaagttcttacagaatctttgacactcaaggagacacccatcccaaccaaggttgctcggcttatgctagtgtctgatattcttcataacagcagcgctccagtgaagaatgcttctgcattccggacaaagtttgaggctgctctacctgatgttatagaaagcttcaatgatttataccgcagtatcactggaaggattactgctgaagctctgaaggtaagttgtattgttctgttttttgagtcctttattttattcctttcttgatgttaccttacgatagcattattttgttgtttctctgcaggagagagttttgaaagttctacaagtatgggcggactggttcttattttccgatgcatatctgaatggactaagagctacctttcttagatcaagccacttaggggtcatcccttttcactctctatgtggtgatacaccagaaattgaaaagaaagctagctctgaggacggcagtgatggatttaggctcaacgaagatggtgccttggccacaggaaaggcagcggcaacaagggagctgttagggcttccgctagctgaacttgaacgccgttgcagacataatggcctctcgctatgtggtggtaaagagatgatggttgccaggttgcttagcttggaagaggctgagaaggaacgagtatatgagaaggacgcgggcattaaatatggacaaggagaatcgcatagaactggaagagatgacattgctgtgaatgctcgtaatgcttctagacctggagaaggtactgatagtggtgaatcagacatgttgggtctctctcattatgctatggaagcagggtacaaacgctctaatgaatccacacccgctgaacctgttccaagcaagaagccaaaagttgaccctgttttgcccgcttcaaaatggagtcgagaggatgatgtcagcgatgatgaagatagaaaaggtggcagaggcttaggattaagctattcatctggtagcgatattgctggtgattctgggaaagctgatgcaacagaagttagtactgatcactcgaatcatcaccaggatacgattcttgatgaagagcataggtaccttttgtcatgatttagcatgcaattcaattacattttttaatcatgtactccgtattagccaattacttcatacagtttataatgtaattgcacatgccttgtgatctgcagaaagaagttaaggcagattgaaattgctgttatgcagtatcgtgaatctcttgaggagaagggtttgcgaaacacagaagagattgagaagaaggttgccagccaccgtaggcgtcttcagtctgaatatggtttatcattttcaaatgatggtgcaaacagcaggcgctcttctggtatgtaagaaggcagcaatgacatatcctctgcttgttggataattgcttttttgttgtttttgaacatacatccttcacttctgaattctgatactagtgaagaatatttttttttttgatatttggctacctttattatctgcgtgatatatcctcatgaaaagcatcacttcctttttttcagagaggacatcgtcggagcggagagataggcatgatgattcttcaagaaagcgtcatcgaagcctgagcaggagccgtagtcctccaaggagatcactggaaagagatcgagagcacaatcgcaacagagacacagacagatctcatggtaatgatgctggacgagagagagacagggtacgtgaaaaaagcgcaagccgagggagggatgatcactatgatagaagcagagacagggagaaggacaggagaaagggaaggtgattgatgcctgcaaaatctcttgcattcatccccttgcctgaataaggtgcagtgtgatatcctgtgccaggttgcatcagttaaaatctgttgcatatatgaagagtatctggcctgccacctgccgcatggcttgaagaacctgtgtattgagtgccctactcatgtagcttgaaaaacagggacagcgtgtgaaaaatagaatattatcaagtggaactgcggaagtagtgcattgaaactctccgccttgtggtggacgaccgcagctaggaactttgctttggtgacaaatgaagtcaagagagttgctttggcgacattgtccatttttattcattgatgaaatcaacgagtgtagttgact</dnaseqindica> 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