Os06g0696600

From RiceWiki
Revision as of 09:33, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os06g0696600| Description = Similar to Xyloglucan endo-transglycosylase homolog| Version = NM_001064992.1 GI:115469715 GeneID:4341942| Length = ...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os06g0696600

Description

Similar to Xyloglucan endo-transglycosylase homolog

Version

NM_001064992.1 GI:115469715 GeneID:4341942

Length

1635 bp

Definition

Oryza sativa Japonica Group Os06g0696600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:30021890..30023524

Sequence Coding Region

30021966..30022253,30022344..30022537,30022982..30023366

Expression

GEO Profiles:Os06g0696600

Genome Context

<gbrowseImage1> name=NC_008399:30021890..30023524 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:30021890..30023524 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggtttcttcttccaatcccgggagaacgccgccgttggtggcggcgattgtgtgctccgtgctgctgctcgccggcggcgccgccggcaacttctaccaggacgtggacatcacttggggcgacggccgcggcaagatcctcggcaacggccagctcctgacgctgtcgctggacaggtcgtccggctccggcttccagtccaagaaccagtacctgtacggccgcttcgacatgcagatcaagctcgtccccggcaactccgccggcaccgtcgccaccttctacctgtcgtcgcaggggtcgcagcacgacgagatcgacttcgagttcctggggaacgcgagcggcgagccgtacacggtgcacaccaacgtgtacagccaggggaaaggcggccgcgagcagcagttccgcatgtggttcgaccctaccaaggacttccacacttactccgtcctctggaacccctcccacatccttttctacgtggacgggacgccgatacgggagtacaggaacacggaggcgacgacgggggtggcgttcccgcgggcgcaggcgatgcgggtgtacgcgagcctgtgggacgcggaggagtgggcgacgcagggggggcgcgtgaggacggactggtcgcgggcgccgttcacggcgtcgtaccgcgggctcgccgcgagcgggtgcacgtcgcaggacgccacggcgtgcgccaacccggggagcccgtggatgtaccagcagcagctggacagcgcgtcgcaggaccggctccggcaggtgcagagggactacatgatctacaattactgcgccgacacgtaccggttcccccaggggttaccgccggagtgcactgccaagtag</cdnaseq>

Protein Sequence

<aaseq>MVSSSNPGRTPPLVAAIVCSVLLLAGGAAGNFYQDVDITWGDGR GKILGNGQLLTLSLDRSSGSGFQSKNQYLYGRFDMQIKLVPGNSAGTVATFYLSSQGS QHDEIDFEFLGNASGEPYTVHTNVYSQGKGGREQQFRMWFDPTKDFHTYSVLWNPSHI LFYVDGTPIREYRNTEATTGVAFPRAQAMRVYASLWDAEEWATQGGRVRTDWSRAPFT ASYRGLAASGCTSQDATACANPGSPWMYQQQLDSASQDRLRQVQRDYMIYNYCADTYR FPQGLPPECTAK</aaseq>

Gene Sequence

<dnaseqindica>77..364#455..648#1093..1477#accaccactgcacgaaaaccatctgatcgatcgatcaaaaaccgaatccaatccaacagtgttacacacacacacgatggtttcttcttccaatcccgggagaacgccgccgttggtggcggcgattgtgtgctccgtgctgctgctcgccggcggcgccgccggcaacttctaccaggacgtggacatcacttggggcgacggccgcggcaagatcctcggcaacggccagctcctgacgctgtcgctggacaggtcgtccggctccggcttccagtccaagaaccagtacctgtacggccgcttcgacatgcagatcaagctcgtccccggcaactccgccggcaccgtcgccaccttctacgtacgcatcgcatcgatcatcgccaatcgagtacatatgcgtatgcctgcctgtaagagctaatggtgattgggtgttgcgtggaagcagctgtcgtcgcaggggtcgcagcacgacgagatcgacttcgagttcctggggaacgcgagcggcgagccgtacacggtgcacaccaacgtgtacagccaggggaaaggcggccgcgagcagcagttccgcatgtggttcgaccctaccaaggacttccacacttactccgtcctctggaacccctcccacatcctgtacgtatcacggttatgttcttttcaactttttttacaccaatgcacttatacattagtagagtcgtggttatatgactcaactcattagaatataaattctgttgcttacgaatattaagtaattttatcatacttgaaaagtactgggaggtgccatattttttaatttaaaatttagtacatctaactactaattatcttgagttaccaaaatttctagtataaaatcttattacctctagacactttatcaagaattataaaattcctcatgaatattatgcatgtgtagatgggcttttaataagattttagtgatatcgaaaatatatcattggtttgtgttagagtgtatagtggtgtgcgcgtgcgcgcgtttatcgtggtaatcgctaaaatgacaaaaggatcaacttctgttaatctgttttgtttgttcagtttctacgtggacgggacgccgatacgggagtacaggaacacggaggcgacgacgggggtggcgttcccgcgggcgcaggcgatgcgggtgtacgcgagcctgtgggacgcggaggagtgggcgacgcagggggggcgcgtgaggacggactggtcgcgggcgccgttcacggcgtcgtaccgcgggctcgccgcgagcgggtgcacgtcgcaggacgccacggcgtgcgccaacccggggagcccgtggatgtaccagcagcagctggacagcgcgtcgcaggaccggctccggcaggtgcagagggactacatgatctacaattactgcgccgacacgtaccggttcccccaggggttaccgccggagtgcactgccaagtaggaaaaaaaaaggggcacttgaaactattttattgtagaattattctgtatctattgctgtatgtgttattgtcgtgtaaaaagtagtagagagatgggaaaaggatacgaggaagataataagtcgacgacgatggatgtataataagtttgtttgtc</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0696600, RefSeq:Os06g0696600