Os02g0189300

From RiceWiki
Revision as of 19:10, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os02g0189300

Description

Lipolytic enzyme, G-D-S-L family protein

Version

NM_001052676.1 GI:115444722 GeneID:4328561

Length

3699 bp

Definition

Oryza sativa Japonica Group Os02g0189300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:4944685..4948383

Sequence Coding Region

4944756..4945151,4946758..4947259,4948043..4948239

Expression

GEO Profiles:Os02g0189300

Genome Context

<gbrowseImage1> name=NC_008395:4944685..4948383 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:4944685..4948383 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgtcgccgctggtacggctgctcctcctcctcctcctcgtcgtcgcggcggcgagccgcggcgcggcgtcggcggcgaaggcgaaggcggcgcgggtgacggcggtgatcgtgttcggggactcgacggtggacacggggaacaacaaccagatcgggacgccgctgcggagcgacttcccgccgtacgggcgcgacatgcccggcggcgcgcgcgcgacggggaggttcggcaacggccgcctcgcgccggacttcatgtcggagtccctcggcctgccgccgctcgtcccggcgtacctcgacccggcctacggcatcgccgacttcgcccgcggcgtctgcttcgcctccgccggcaccggcctcgacaacgccaccgccggcgtcctgtcagtgatcccgctgtggaaggaggtggagtactaccgggagtaccagcggcggctgcgcgcgcacgcgggcgccgcggcggcgcgcgacgtcgtgcgcggcgcgctccacgtcgtgagcatcggcaccaacgacttcctggagaactactacatgctcgccacggggcggttcgcgcggtacagcgtgggggagtacgaggactacctcgtcgccgcggcgcgcgcgttcctcgccgcgatccaccgcctcggcgcgcggcgcgtcacgttcgcggggctctcgccgatggggtgcctgccgctggagcgcaccgccggcgcgctcctcggcggcggcggcggcggctgcgtcgaggagtacaaccgggtggcgcgcgagtacaacggcaaggtggaggccatggtgaggtcgctccgcgccgagctcccgcgactcaaggtcgccttcatccccgtctatgacaacatgctcgacctcatcacccacccggaaaagtacgggctggagaacgtggaggaggggtgctgcgcgacggggaggttcgagatggggttcatgtgcaacgacgagtcgccattgacgtgcgacgacgccagcaagtacctcttctgggacgccttccaccccacggagaaggtgaaccggatcatggcgcagcacacgctcgacgtctgctaccagcaaggcgtcctctga</cdnaseq>

Protein Sequence

<aaseq>MASPLVRLLLLLLLVVAAASRGAASAAKAKAARVTAVIVFGDST VDTGNNNQIGTPLRSDFPPYGRDMPGGARATGRFGNGRLAPDFMSESLGLPPLVPAYL DPAYGIADFARGVCFASAGTGLDNATAGVLSVIPLWKEVEYYREYQRRLRAHAGAAAA RDVVRGALHVVSIGTNDFLENYYMLATGRFARYSVGEYEDYLVAAARAFLAAIHRLGA RRVTFAGLSPMGCLPLERTAGALLGGGGGGCVEEYNRVAREYNGKVEAMVRSLRAELP RLKVAFIPVYDNMLDLITHPEKYGLENVEEGCCATGRFEMGFMCNDESPLTCDDASKY LFWDAFHPTEKVNRIMAQHTLDVCYQQGVL</aaseq>

Gene Sequence

<dnaseqindica>72..467#2074..2575#3359..3555#actctcagtgtcactcacttcactgcttacaccgcgcgacgcgtcacacacgtacgtagtagctagctgcaatggcgtcgccgctggtacggctgctcctcctcctcctcctcgtcgtcgcggcggcgagccgcggcgcggcgtcggcggcgaaggcgaaggcggcgcgggtgacggcggtgatcgtgttcggggactcgacggtggacacggggaacaacaaccagatcgggacgccgctgcggagcgacttcccgccgtacgggcgcgacatgcccggcggcgcgcgcgcgacggggaggttcggcaacggccgcctcgcgccggacttcatgtcggagtccctcggcctgccgccgctcgtcccggcgtacctcgacccggcctacggcatcgccgacttcgcccgcggcgtctgcttcgcctccgccggcaccggcctcgacaacgccaccgccggcgtcctggtaataattaaagcaaagctacaccaccatcatcactatcaacaatcctcagcaaaatacttgcaaaattcacacgcccatcaaattctatatgaaattcttctaaagaatcaaatgcgtgctgaccttcctccgtccgtttcatatattgcaagtcattttgacttttttaaattaagtcaaacttctttaaagtttgatcaattttatagaaaaattgacaatatttatagcattaaactagttttattaaatttaagattggatatatttgatagtttaaatgttaaaagtattactatatttttcaataaatttgaccaaagctaaagaagatgattgggttagataaaaatcaaaacgacaaacggaggtagcaatacacactgtgcattgcaactcgcaagtatttctaagaatcaaatagtagtacaacattatgcactgcttcaaagaaccaaatacaacattatgcatgcaagttgtgaaaatcctttccaaagaatcaaatgcaacagcattgtgaattgcaagttatggcttttccaaagaatcaatcgcagcattatcattgcaacttgcaatctaagaaaaattcagacttgccgtttctgaataattgtactttgctggagtcgtctgaaaatgtctgcaatttaaggcagttcgttcgacgttaggtctcgttgttaaaacttaaatgcattgggacccaaatctctctttcccgggcactgttgcatgcacaccactgtcatcacctgtaacaatgaaaaagaaaaatggctgtacgttttcagtattcagttatctttcgatggcttgtctgaagaacgcacataatgggcatgtgtttccctgctttgttcttcgtttttctgcaaccacttgtgccggcattaagtaggctagctggattcatccgattgcgtcttctagagaagaactgtcttgatttgattgcctaatcatggtagggcatgtatgcagttctgaatttattattaaatcatcattaatccaagtaggaatatttctctgagattgtctcctgctgtgtagagctgctcactggagtagtacatttctagatggtttccgacaagtatactatatagggttacagcactaatctcagtgttgattgatgttgtctcaaaataaacaagatcttactgttgttggatcaatactcttactgttttacaacactctagttgtgttgattgattcaatgactcctacatataaagttaaaatatagtaatagtaattaactaggtgaaaactatattaccaatgactgattcttgcaataaaaccagtacttaagttttgacccagagaatccagcagcattgcttttgtttcggttgtcccggtcccaaccaaaatcgtatgctactactaattacaacgagaagtactcctgcatccatgcagatgcatgtgacgcattcacactctcttctccaaatctcacctgctccaaatctcatctgccaaatgcatgttcataatcagagctcacctcgatcgatcgaattcatggcgatcgatctacacaaaagtgcgaaattaattgacgcgcgcgtgttccgattagtcagtgatcccgctgtggaaggaggtggagtactaccgggagtaccagcggcggctgcgcgcgcacgcgggcgccgcggcggcgcgcgacgtcgtgcgcggcgcgctccacgtcgtgagcatcggcaccaacgacttcctggagaactactacatgctcgccacggggcggttcgcgcggtacagcgtgggggagtacgaggactacctcgtcgccgcggcgcgcgcgttcctcgccgcgatccaccgcctcggcgcgcggcgcgtcacgttcgcggggctctcgccgatggggtgcctgccgctggagcgcaccgccggcgcgctcctcggcggcggcggcggcggctgcgtcgaggagtacaaccgggtggcgcgcgagtacaacggcaaggtggaggccatggtgaggtcgctccgcgccgagctcccgcgactcaaggtcgccttcatccccgtctatgacaacatgctcgacctcatcacccacccggaaaagtacggtgagtcacctcctttattataagtcagtttcaaagtcaaaatagtactccatccatccacaaaaattagacatatttcacatttgagtttttcctatttgtaaactttatgcattcaatacttaaatgaagagataaattaaatgtttgattataacccaatgagtcatctaaacactcattggttgcatgtttgcattcattccttaattttgtaatatccaagataatttaatttctctttggtcttagtgacaaaagtaatatgcgaggaagtaacatttttaactcaagataaatttattatgaaaatatattcaattattgatttaataaaagtaatttgatattgtaaatattattatatttgtctatgaatttagtaaaaattgaagcagtttgactttaacaaaagtcaaaatgacttacaataagaaacagagggagtagtaaattgtatttcgcattggataaagcatatattgtttcatttgctttacaccagtagtagattgtatcgaaataaattttagttagcacaccacgatacgagaaaaattatggtatttgaaaaactacctcgaggtatctagattttactctgaaaattttaactagtactagctaaatgtaccaaattttacattagaaaatatgatatctactgttaattacgagaggaaggcacattctattctcataagaacacgaaaaattatagtgagttttgcttaggtggctcggccactgacccaagtatgttgtaatgttttggggaggtagggctggagaacgtggaggaggggtgctgcgcgacggggaggttcgagatggggttcatgtgcaacgacgagtcgccattgacgtgcgacgacgccagcaagtacctcttctgggacgccttccaccccacggagaaggtgaaccggatcatggcgcagcacacgctcgacgtctgctaccagcaaggcgtcctctgatccatccatcagattatctgtaatgcgtaggatttgtactggattcttgacgagagaaaaaaatcgataaatatatggcggcacatcatcatggtcagaaacccctagatctcaaatcaatgggaagaatcaaatttgtattgc</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0189300, RefSeq:Os02g0189300