Os02g0226000

From RiceWiki
Revision as of 19:11, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os02g0226000

Description

Similar to Peroxisomal membrane protein PMP22 (22 kDa peroxisomal membrane protein)

Version

NM_001052878.1 GI:115445126 GeneID:4328779

Length

3104 bp

Definition

Oryza sativa Japonica Group Os02g0226000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:7095391..7098494

Sequence Coding Region

7095662..7095713,7095807..7095892,7095980..7096050,7096463..7096538,7096877..7096978
,7097925..7098023,7098108..7098239

Expression

GEO Profiles:Os02g0226000

Genome Context

<gbrowseImage1> name=NC_008395:7095391..7098494 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:7095391..7098494 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcagcagcagcagtagcagcagggagaggaggggttaggggaagaggagagggggaggaggggtcgctggctcggcgggcgtggcggcagtacctgcgccagctccagctccaccctctccggaccaagatgatcacggcggggtgcctcgccggcgtcagcgactccgtggcgcagaagctctccggctaccagaggatcgagaagcgccgcctcctgctcaagatgctctttgggtttgcttatggtggcccttttggccatttcctccataaagtgttagattatatcttcaaagggaagaaggataccaaaactatagccaagaaggtgttactggagcagatcacttcttctccctggaataatctgctcttcttgttctattatggatatgttgttgagaggaggccttttaaggaggtgaagaccagggttaagaaacaatatccctcggtgcaattgtctgcttggatgttttggccaatagttggttggataaatcatatgtacatgccgttgcagttccgggtgattttccacagctttgttgcatgttgctgggggatatttcttaaccttcgtgcaagggccatgtctttgaagcagtcgtag</cdnaseq>

Protein Sequence

<aaseq>MAAAAVAAGRGGVRGRGEGEEGSLARRAWRQYLRQLQLHPLRTK MITAGCLAGVSDSVAQKLSGYQRIEKRRLLLKMLFGFAYGGPFGHFLHKVLDYIFKGK KDTKTIAKKVLLEQITSSPWNNLLFLFYYGYVVERRPFKEVKTRVKKQYPSVQLSAWM FWPIVGWINHMYMPLQFRVIFHSFVACCWGIFLNLRARAMSLKQS</aaseq>

Gene Sequence

<dnaseqindica>2782..2833#2603..2688#2445..2515#1957..2032#1517..1618#472..570#256..387#tgcggcccacccccgccggccgagtccctccgccgtacgtccggccggcgatgcaccaccgcgacgcgacggaatcatcacgcggatctcccctcttccccaacccaaacctgacgctgtgaatttaattaataataataaaaaaacaaagatctcgccgcgcttcccaccgagcggcggagcatacaaagcagcaggagcagttgattgggtagatcgaagcagcagggtgaggtaggcctgaaggattccgccatggcagcagcagcagtagcagcagggagaggaggggttaggggaagaggagagggggaggaggggtcgctggctcggcgggcgtggcggcagtacctgcgccagctccagctccaccctctccggaccaaggtgcgttcttgtttcgctcctcgattcgattggttttctgcgcgcgcgggattgtttgctcaatttttgggggattgcgtgcagatgatcacggcggggtgcctcgccggcgtcagcgactccgtggcgcagaagctctccggctaccagaggatcgagaagcgccgcctcctgctcaagatggtacggacctgtgcttgtgctagtttcctgccttcctgcggggttgttgcgggattgggtaaaggtggatcgttttcttgattttttttagtatagtcctttatgactgcgagactgatcgtgtgctgatctcctttgtgtatagaattctcatgtaggagtagaggatttcgatttaggatttgcagtaatgcagtatatcaatgtgatttgtttattgtttgagtagaggatccagttgaaagatgccttgcgcttctacactgatgagttgtatagcgagtagtttcaggcattctgatctggtgaggtttgcttaggtgcgctgcagttcttgcgtcattgagtttccatgaatagaaaaattagttgttagtgctttacagcattgaggatttttaggtatcctgtaaacttcaattataaaagagtaaattttatgtgttgctgaattgccacaataatgtatatttgtgcattccaactatttatgaatgtttgatactttcaggctgaagcaagctcttagtttgccattatctactacttttggtctcagttaccatagagttacggatccttggatttcaattttgattacacattgtaggctgaattatgactagttgcatggccattaaagtattaaaaaactattcaaggcttgaacccttgtttttcacttctacttcttgcttttcttcatgagacacttgacatttcgtccagtggacaacaaatggtgcttcacatctattcatatctaacctgttctttgatgttaacttggaagtttgtatctaacctgttctctgatgttggtaacttggcaaaatttaatcacattgccattcctacaataactttctcttctgttatttatgatgctttcatgcatgtttttgtgtactaaaagttctgacaagtgtactatgttttcctgtagctctttgggtttgcttatggtggcccttttggccatttcctccataaagtgttagattatatcttcaaagggaagaaggataccaaaactatagccaagaaggtataaaattatttcctgataacctgtgcaatatctttcgcttcatttcatgtgggctatgtataagagttctcgtgcaagactttacaaattcaactaacttatatgttaaagaagcacatcttgatctagttgttttgacttccgtttttcaaaaatatgttctaaattctattgcaaactactccaatctaccagcaacaaacttttagactatgctatttttggtccttttccagaacactggaggaaaccatgattgaagtcatgctagctctggtcgacaggctgtacttgatattattgttaagatgtttaatagatgataaccttttcaggtgttactggagcagatcacttcttctccctggaataatctgctcttcttgttctattatggatatgttgttgagagtaagtatttaattatcaagtcagtacagtttgcgacttaatgccagtgaaagtgtttctgtggtattatgctatgacaagctggcaatcataattctgaagttgatatattgtcttcctagcatgtggtggtttctggaatcttctctgctagtcattctttttttaattgtgaggtttggaacgtactgcataaacaacaatacccagagtacttaaaatggaggtcctctagggcctaaaagggactgacttacaataatgcacatttactatgaatattgttattttttcttggatcagatggatatctatctaaatgtaatggcagtgttgagtgcaaaaacctttagcccatgtcttgttaaccaaatgaatagtttacttattgtttgtgcatcttgtgatgtagggaggccttttaaggaggtgaagaccagggttaagaaacaatatccctcggtgcaattgtctgcttggatggtatgtgatttactttcaataatcaacattgctgcttgcctgtgatgttccctccatggcccattaatatatctgatcaacatgcagttttggccaatagttggttggataaatcatatgtacatgccgttgcagttccgggtgattttccacagctttgttgcatgttgctggtaatttttctagtggcctgaacactttggtaacttattggatggatggaattccaattctcagcctcacctgatcatcctattctttttcagggggatatttcttaaccttcgtgcaagggccatgtctttgaagcagtcgtagagaatttagtaggaaaaaattgcagcacctctccaacttgattcttactgactaaagaacaaggatgctgagtgctacgcaatatgcagttagcaacaaattgttacgagtggtttgggatttcgagtatttatctggtgtttagttgggtttgtttgtcagcaaatgcgagattgttaacaaaggtattctgttgacaccggttatgacttatgatgaacccaaagtatgatttgatatctatggatgagcttggcctgcctttgaaatc</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0226000, RefSeq:Os02g0226000