Os06g0700000

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Revision as of 09:33, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os06g0700000| Description = Proteinase inhibitor, propeptide domain containing protein| Version = NM_001065011.1 GI:115469753 GeneID:4341961| Le...")
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Gene Name

Os06g0700000

Description

Proteinase inhibitor, propeptide domain containing protein

Version

NM_001065011.1 GI:115469753 GeneID:4341961

Length

6648 bp

Definition

Oryza sativa Japonica Group Os06g0700000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:30311392..30318039

Sequence Coding Region

30312489..30312664,30313133..30313277,30313362..30313756,30313927..30314022,30314233..30314305
,30314553..30314838,30315577..30315902,30316582..30316849,30317026..30317307
,30317416..30317831

Expression

GEO Profiles:Os06g0700000

Genome Context

<gbrowseImage1> name=NC_008399:30311392..30318039 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:30311392..30318039 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgaaggcgcttgagctcgcgtgtttgcttcttatcattgtaccacaagtggttcttggaacacatgatgtgtacattgttacaatggaaggcgaacctgttgtcagctacagaggtggagttgaaggattccctgcaaccgccatagatttggatgaagatatggaaattaccagtgaggctgtgacttcatactcactccacctacgaaggtaccatgacaagcttctagactcacttttggtagaaggaacttatgagaagctttatagctaccatcatcttattaatggttttgcagtacacatgtcacccttacaggctgaattcctaaggaaagccccaggagtaaagcatgtggagagagatatgaagatacagaaattgacgacacacactccacaatttcttggattgccaacaggggtatggccaacgggtggtggcttcgatagagctggtgaagatgttgtgattggctttgtggattcaggaatttacccccaacatccaagcttctctgcccacaaaactgatccttatgggcctgttcctcattacaaggggaaatgtgagatggatccagtaacaagaagaagcttttgtaatgggaagatagttggtgcccagcattttgcaaaagctgcaattgctgctggagcgtttaatcctgatgtcgattttgcatctccattagatggcgatggccatggaagtcatacagcagcaattgctgctggaaataatgggattccagtacgaatgcatggtcacgaatttggcaaagcaagtggtatggctccacgtgctaggatagccgtgtacaaagtcctttacaggctttttggtggttatgtatctgatgttgttgcagccattgatcaggctgtgcaggatggtgttgacattctcaacctttctgttggcccaaatagcccgccaactgctacgcggactacatttttgaatccttttgatgctgcacttctttccgctgtgaaagctggggtgtttgttgcccaagcagcaggaaatggaggaccatttccgaaaacactggtatcattcagcccatggataaccactgttgctgctggagttgatgaccgcagatacaaaaatcatttggtgctaggaaatgggaaacttcttcctggacttggtgtatcacctgcaacccatgagaataaatcattcagcctgatttctgcggctgatgctctgctgggttcatctgccaccaagtacagtgcattagattgccaaaggccagaactcttgaataagaggaaaattcagggcaaaattcttttgtgtggatattctttcaactatatttctgggacagcttctatcaagaaagtgtcagagactgctaggagtcttggtgcagctggttttattgttgctgtggagaatagttacccaggaacaaaatttgatcctgtacctgtcagcatgcctggtattctcatcacagatgtcagcagaacaaaggatcttatagactactacaactcttctacaataagagattgggcaggaagggccacgaccttccaagcaacagcagctattgcagatggtttggcaccaactctatacaactctgccccccaggttgccttgttctcttctcgaggaccggatgtaaaagattttagctttcaagatgctgatgttctaaagcctgatatactcgctcctggcaatcttatatgggcagcatgggcgcctaatggaactgatgaagccaattatgctggggaaggatttgcaatggtttctggaactagtatggctgcaccacatattgctggtatcgcggcactaataaaacagaagaaccccaagtggagtccctcagcaataaaatctgccttgatgactacatctaatacattggacaaggggagccatcctttaagagcacaacagtactctacatcagaaattatgacacttacacgggctacgccgtttgattatggcagtggtgcggttaacccaaaagccgccctggatcctggccttgttctggatgcaactcatcaagattacatcacatttttgtgttcgatccccgacgtggaacacagtgaagtatcaaacataactggttcaacttgcagctccagctccaaggtgcagcagcgcccctatgatctcaacatcccctcaatcaccatctcccagcttagaggcacgcagacggtgaagcggacagttacaagcgtggccgccgaggccgaaacctacaccatcatgacaagaatgtcgccggagatcgcgctggaggtctcacctccagcgctgacagtgctccccggcgcatcgagagagataacggcgaccctcacggccaggtcagtgactggcacctacagttttggagagatcaccatgaaaggggaccgaggtcaccttgtgagaatcccagtggtagctatgggatttaagtag</cdnaseq>

Protein Sequence

<aaseq>MKALELACLLLIIVPQVVLGTHDVYIVTMEGEPVVSYRGGVEGF PATAIDLDEDMEITSEAVTSYSLHLRRYHDKLLDSLLVEGTYEKLYSYHHLINGFAVH MSPLQAEFLRKAPGVKHVERDMKIQKLTTHTPQFLGLPTGVWPTGGGFDRAGEDVVIG FVDSGIYPQHPSFSAHKTDPYGPVPHYKGKCEMDPVTRRSFCNGKIVGAQHFAKAAIA AGAFNPDVDFASPLDGDGHGSHTAAIAAGNNGIPVRMHGHEFGKASGMAPRARIAVYK VLYRLFGGYVSDVVAAIDQAVQDGVDILNLSVGPNSPPTATRTTFLNPFDAALLSAVK AGVFVAQAAGNGGPFPKTLVSFSPWITTVAAGVDDRRYKNHLVLGNGKLLPGLGVSPA THENKSFSLISAADALLGSSATKYSALDCQRPELLNKRKIQGKILLCGYSFNYISGTA SIKKVSETARSLGAAGFIVAVENSYPGTKFDPVPVSMPGILITDVSRTKDLIDYYNSS TIRDWAGRATTFQATAAIADGLAPTLYNSAPQVALFSSRGPDVKDFSFQDADVLKPDI LAPGNLIWAAWAPNGTDEANYAGEGFAMVSGTSMAAPHIAGIAALIKQKNPKWSPSAI KSALMTTSNTLDKGSHPLRAQQYSTSEIMTLTRATPFDYGSGAVNPKAALDPGLVLDA THQDYITFLCSIPDVEHSEVSNITGSTCSSSSKVQQRPYDLNIPSITISQLRGTQTVK RTVTSVAAEAETYTIMTRMSPEIALEVSPPALTVLPGASREITATLTARSVTGTYSFG EITMKGDRGHLVRIPVVAMGFK</aaseq>

Gene Sequence

<dnaseqindica>1098..1273#1742..1886#1971..2365#2536..2631#2842..2914#3162..3447#4186..4511#5191..5458#5635..5916#6025..6440#acctccactccactccactctcccaccactctcgcttcccgaggcgcgcaaaccctagcctcgtcgcgccgcgccgcatcctcctcctccccccgcctgagtagcgccgccgcatgcggctgcgcgaggcgcggcgaagcgactgacggggggtgatccgccgctttcgggggctgatcgaggcgggaggaggagcggcggcgccggggaatgcccgacctctcaggcgatctccttcgtggtttttggtaataataaacaggtttgttcatctctcgttttacatttttctttctctccgtgacgcgcgtttttttttttgctgttcctcttttggtggtttacctggtaatagagctaagctacagtaggataaaggaccatactgtttagagattccttttgccaatttttaaattttttcatcggtattttgtttgaaggaaaacctttttttttttccttcttttagttttggctgtattttttaccagatgatgatattattcatattgatctttgattttgttgtttcacccttttttagcagcttgcagtattggttacagtgagataatatttgttcagcctgttctagtagatcttaactcatgcttgatcctttagcaaagtggtataaatttttagtttcatttcaaaatcaatctgttctaaagaaaatgcagctattaaaatgcatacggagtacacacagactagccgtttacagtacgctatattgtagtgtagactgtagagtataatcgttctgaagagccatttaatgtcatcggccgccctaatttaataaggttccgtaaatgcgtgctccatgagaggcttgtgaggtgggcaactccagtatcacaaagaaattgtgggcactgccgggaccagtagtggatgactagggtagtgagtgattttactcagtcagtagtgcagtcctgtactcctgtagttgttgtactcttgactctcccaaaccatcaaattgatgtctagtgtcatgcatacttgtaacttgtaagtgcacttccctgacagttccattctttggaagattctgtggtgtggcaattcggatattgctgaagatgaaggcgcttgagctcgcgtgtttgcttcttatcattgtaccacaagtggttcttggaacacatgatgtgtacattgttacaatggaaggcgaacctgttgtcagctacagaggtggagttgaaggattccctgcaaccgccatagatttggatgaagatatggaaattaccaggtagtttactattgatgatgttttttcaccatgccttcgaacatttattttgtgttggctgactcttggtgaatttgtggagtctatgttgggttgcatggcatattggacttgttagttcttattgttgaattgcatttcacatgtcttgttgcacttggagcttgctactgaggaagtgcacctcctaaatgtttcttgaaatggattccattttcttcccattatgatatatcatatatgtagtgtgtgaggtttgagctgttaagagtcttccaacatgttaagaatatctgctcgaaagccttcattagaaaaaaaaaaggtcaccactgttactgtctttcagctctctgatattgaaattgattatccccccattaagtttttaatcacagcttgcttgtatttgtggagttgtggtggaaacatgacaattttgtatatgttccaatttactgatttcagtgaggctgtgacttcatactcactccacctacgaaggtaccatgacaagcttctagactcacttttggtagaaggaacttatgagaagctttatagctaccatcatcttattaatggttttgcagtacacatgtcacccttacaggtatttagcatttttatatcttttcttctttcctggtttaagattattatcttggctgaacacagcaatctttcactgtgttaggctgaattcctaaggaaagccccaggagtaaagcatgtggagagagatatgaagatacagaaattgacgacacacactccacaatttcttggattgccaacaggggtatggccaacgggtggtggcttcgatagagctggtgaagatgttgtgattggctttgtggattcaggaatttacccccaacatccaagcttctctgcccacaaaactgatccttatgggcctgttcctcattacaaggggaaatgtgagatggatccagtaacaagaagaagcttttgtaatgggaagatagttggtgcccagcattttgcaaaagctgcaattgctgctggagcgtttaatcctgatgtcgattttgcatctccattagatggcgatggccatggaaggtcatgctcctaattaatatatgttctgttctagtttcttataccaagaaaaatgccatacatgaaaattgttctgtccaaagaattagctattctggttgtgtttcatcttgagaagaatggcatgacttatctagttatctgatacaaagatgctttcccttaaacagtcatacagcagcaattgctgctggaaataatgggattccagtacgaatgcatggtcacgaatttggcaaagcaagtggtatggctccacgtgctaggtaagtttccatttcttcagcattttctaatttcaagatctcattgaacaactaagaataatgcacaaaaatcacctcaatgaatgtgagccttgtgctagtgaaattcacttccttctatcttgccgttattgttaatcaatatctattattcccctttgcttttgctctccttccggattgtgattttcctgagtttgtgattgacaggatagccgtgtacaaagtcctttacaggctttttggtggttatgtatctgatgttgttgcagccattgatcaggtataacatatgagttacttatctgaatttctttccactgtaatgcaggtgctgccatgttagtacttagtacctgacaatagtgactcaaaacaattatttctggaatctgccatagtagttgttttcttcatagactattgcagaaatgagtgaaacaacatctgccagttatgtaatgcatgtcactatcacaagccttcaatatgtaggaactaatgcatggatggcaatctgcattttgcaggctgtgcaggatggtgttgacattctcaacctttctgttggcccaaatagcccgccaactgctacgcggactacatttttgaatccttttgatgctgcacttctttccgctgtgaaagctggggtgtttgttgcccaagcagcaggaaatggaggaccatttccgaaaacactggtatcattcagcccatggataaccactgttgctgctggagttgatgaccgcagatacaaaaatcatttggtgctaggaaatgggaaacttcttcctggacttggtgtatcacgtaagttctgtttattcatgtattttagctcaaattttggttttctattactacatgtatggtatatgcattcatgggcaacaaaaattgtacaaaatgaattaaaatgacctaagctaagtggcctaccttttaacttcgcccccccccaaaataaataaataaataaaaatcactcaatgttgttgtctgcgcttagggtgtgttcggaacccctggttcccaacactaagtgcccgcacggaaacggagcagcgattagcgggtgattaattaagtatttactattttttttttcaaaaatggattaatttgttttttttaagcaactttcgtatagaaacattttgcaaaaaagcaccgtttagcagtttgaaaagcgtgcacgcggaaaacgagggagatgggttgggaagaggggctgccgaacacagccttagagaagtatgaatgatagggcagcatcagctgcacttgatttttttttgttatgtagggtgtaggactgtaggtagatctttatacgaaattgtgtttttttatctcattgtgaaaatactttgtgtgaaagagacaatcctctgtttttcttcctttgtaattccactgtcatatgttactgcatcccatagcaaatatgttactagattgcaatcatgtcaacaaatgcaggcaatctgacagttacatagaaatttctacttgtggttaatttacagttttctcatttggctacagctgcaacccatgagaataaatcattcagcctgatttctgcggctgatgctctgctgggttcatctgccaccaagtacagtgcattagattgccaaaggccagaactcttgaataagaggaaaattcagggcaaaattcttttgtgtggatattctttcaactatatttctgggacagcttctatcaagaaagtgtcagagactgctaggagtcttggtgcagctggttttattgttgctgtggagaatagttacccaggaacaaaatttgatcctgtacctgtcagcatgcctggtattctcatcacagatgtcagcagaacaaaggtactacctccgtcccaaaatgtagctatttctagcacagtactttgtcccaaaatgaagctatttttctacctaccttctcctctcaaccaatcacaaccattctttttcacctactttctcttttcaaccaatcacacaccttcttcaatcattctcacatactttcttaatacccgtgccaacctaaaaaatgcttacattttgggacggaggaagtattgcatccccaaaagtgtcagtgtgtagatatcatggatgccatctgtaggcagaacaccatgagtggagtattgaaaagctgcagattctaatgttttttcttttatctggaatgtttttcttttatctggctacgtcttatgtaaacatgaactagaaaaaactatttatgtagcgtagtggattgtatagctcttgtgtaaccatccatctagttttggtgtctgttcagtgcccacaaactattctcgtatagttgtcttcttttttagtcgagctactctcagaaagtcagtcccctagaatgtacatgcttcaagagcagtgacatgaattgtatatgcctgctattgtaggatgacatgataattgaatagtagggaaaacctatgcatgttagttagataatacgttttttttttgatatagtcaggtgacattagttttggttctgtaggatcttatagactactacaactcttctacaataagagattgggcaggaagggccacgaccttccaagcaacagcagctattgcagatggtttggcaccaactctatacaactctgccccccaggttgccttgttctcttctcgaggaccggatgtaaaagattttagctttcaagatgctgatgttctaaagcctgatatactcgctcctggcaatcttatatgggcagcatgggcgcctaatggaactgatgaagccaattatgctggtaagctttgctgtacttttatatcccttgaagcatacaaagctttttaagcatgttatggttgcattgaaattttccttgcatgtttgattgttctatgtggtaattcatatggacgtttgtcaatcatgtggcttacctaaaatatatttctcttgtggcaatgcatattccaggggaaggatttgcaatggtttctggaactagtatggctgcaccacatattgctggtatcgcggcactaataaaacagaagaaccccaagtggagtccctcagcaataaaatctgccttgatgactacatctaatacattggacaaggggagccatcctttaagagcacaacagtactctacatcagaaattatgacacttacacgggctacgccgtttgattatggcagtggtgcggttaacccaaaagccgccctggatcctggccttgttctggatgcaagtaagttaaatttttcgtatgcaattttttaataaattcaaactgctccatgttattcagacaataatctgaagaccattctaagtttgaatttttttttgttggtagctcatcaagattacatcacatttttgtgttcgatccccgacgtggaacacagtgaagtatcaaacataactggttcaacttgcagctccagctccaaggtgcagcagcgcccctatgatctcaacatcccctcaatcaccatctcccagcttagaggcacgcagacggtgaagcggacagttacaagcgtggccgccgaggccgaaacctacaccatcatgacaagaatgtcgccggagatcgcgctggaggtctcacctccagcgctgacagtgctccccggcgcatcgagagagataacggcgaccctcacggccaggtcagtgactggcacctacagttttggagagatcaccatgaaaggggaccgaggtcaccttgtgagaatcccagtggtagctatgggatttaagtagactaatgtaagtggctccaggtgagctagagctatgtctgcctctgaaagcttcaagctgaggaatgctgtaattttttgtagcttagtagaaagaaaataatagtcagtacgatgctgtatttccatgttgttatacttgtgctcctggctgtaaaatatatgtgggctttgaagcctctatgaaatgatctggagttaatgtgtcc</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0700000, RefSeq:Os06g0700000