Os06g0701300

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Revision as of 09:33, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os06g0701300| Description = Beta-lactamase family protein| Version = NM_001065018.1 GI:115469767 GeneID:4341968| Length = 7696 bp| Definition =...")
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Gene Name

Os06g0701300

Description

Beta-lactamase family protein

Version

NM_001065018.1 GI:115469767 GeneID:4341968

Length

7696 bp

Definition

Oryza sativa Japonica Group Os06g0701300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:30393289..30400984

Sequence Coding Region

30394072..30394222,30395429..30395457,30395541..30395613,30396650..30396807,30396888..30397014
,30397101..30397176,30397251..30397308,30397393..30397491,30397582..30397710
,30398236..30398357,30398470..30398638,30398732..30398832,30398985..30399111
,30399187..30399276,30399419..30399505,30399606..30399833,30399932..30400006

Expression

GEO Profiles:Os06g0701300

Genome Context

<gbrowseImage1> name=NC_008399:30393289..30400984 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:30393289..30400984 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgggatggggaaacaccttaaccaggcgcctcaaagtcttttccatggccttgtttatatacttcgactataaggcagttcagaagagagttaaatgggttggcgctggtaaaaaggatgctatatggacaaaaacacacgagcgaaatgctcgtcgtgttctcaacctgatgatagagttagaaggtttatgggtgaaaatgggacaatatttatccacaagagcagatgtgcttcctgaaccctacataaatgtcctcaagcagttgcaggactcgcttcctcctcgccctcttgaagaggttcgtggaaccatagagaaagaacttgggaaacccatgaatgatctgtttgctaattttgtgctggatcctctagcaactgcatcaatagcacaggttcatcgtgcaactcttgtagatggcagagaagtagttgtgaaaatccaacatgatggtatcaaagatatcatattagaggatttgaagaatgcaaaatcattagttgaatggattgcatgggcagagcctcaatataattttaacccgatgatagatgaatggtgcaaggaggcaccaaaggaacttgatttcaaccatgaggcagagaacacaaaggctgtctccagtaatcttagtcgaaaaaccaattgcgagagtggtgctgtctctagtgctgttgacgtactgattccagaagttattcagtcaactgataaggttctaattttgcaatatatggatggaattcgtttgaatgacaatgattcgttagaagcatatggtgttgataagcaaagacttgtggaggagataacccgtgcatatgctcatcaaatatacgttgatggcttctttaacggcgatcctcaccctggcaattttcttgttagcaaggaacctccacacaagccgattctccttgattttgggcttactaaacgcatatctcaatcaatgaggcaggcactagcaaagatgtttttgtcatgcgctgagggagaccatgtggcactgctgtcagcctttgcggagatggggcttaagctgcgggttgacatgcctgagcaggctatggagatcgctacagtattttttcggcagtccactacagcaaatgaagcaaaggagaacataaagacattgaatgaccaaagagaacgaaatgtcaaggcacttcaagaaaagatgaaaatgaataaaaaggaggttcaacgtttcaatccagttgatgctttccctggtgatgcaattatattcatgagggttttgaatcttcttagagggctatcagcatcactaaatgttaggatagtttatctagacatcatgaggccatttgctgaatcaactttgctagggagtatgacacgtgggcccacagctaacagtcagtggatttatgactcacctgttaactcagaggtggagtctaaactgcggaaccttctgcttgagttgggaagcaacaaaattttaggaatacaagtttgtgcttataaagatggaaaggtcataatagataccgctgctggtacgttagggaagtatgatccacgtcctgttcaacctgattctctctttccagttttttcagtgacaaagggtatcactgctggcatggtgcattggcttgttgacaaagggaagttgaagtatgaggagactgttgccaatatatggccaaaattcggaactaacaaaaaagagctaataaaggttcatcatcttctgaatcatacatctggctcgatactacgccgcgctgggggcaggcggcgccattcctccgccgcactccggtggtggctccaagccgccactcggcagccatgtccacacccccaagttccccaccatgccgtccaagaagaagaagaagggaggttcgaagaatga</cdnaseq>

Protein Sequence

<aaseq>MGWGNTLTRRLKVFSMALFIYFDYKAVQKRVKWVGAGKKDAIWT KTHERNARRVLNLMIELEGLWVKMGQYLSTRADVLPEPYINVLKQLQDSLPPRPLEEV RGTIEKELGKPMNDLFANFVLDPLATASIAQVHRATLVDGREVVVKIQHDGIKDIILE DLKNAKSLVEWIAWAEPQYNFNPMIDEWCKEAPKELDFNHEAENTKAVSSNLSRKTNC ESGAVSSAVDVLIPEVIQSTDKVLILQYMDGIRLNDNDSLEAYGVDKQRLVEEITRAY AHQIYVDGFFNGDPHPGNFLVSKEPPHKPILLDFGLTKRISQSMRQALAKMFLSCAEG DHVALLSAFAEMGLKLRVDMPEQAMEIATVFFRQSTTANEAKENIKTLNDQRERNVKA LQEKMKMNKKEVQRFNPVDAFPGDAIIFMRVLNLLRGLSASLNVRIVYLDIMRPFAES TLLGSMTRGPTANSQWIYDSPVNSEVESKLRNLLLELGSNKILGIQVCAYKDGKVIID TAAGTLGKYDPRPVQPDSLFPVFSVTKGITAGMVHWLVDKGKLKYEETVANIWPKFGT NKKELIKVHHLLNHTSGSILRRAGGRRRHSSAALRWWLQAATRQPCPHPQVPHHAVQE EEEGRFEE</aaseq>

Gene Sequence

<dnaseqindica>6763..6913#5528..5556#5372..5444#4178..4335#3971..4097#3809..3884#3677..3734#3494..3592#3275..3403#2628..2749#2347..2515#2153..2253#1874..2000#1709..1798#1480..1566#1152..1379#979..1053#tgtctgaactctgaactctctctctctctctctctcctcctcttcccggcggagtcccccacctcgcctcccctccctgcgcgcggcaccaccggcgggaaggtctccggagtgcgcggcggtgtggacgtcttcctaccctccccgtcccaaccccgcggccgcttcgttcttggtcgtcctcggtgtgttcttgttgttgttgttgttgttcggatcgagttgatttcgtgcccctcccattatggaatcaggtttcttcagggtttctctgatgtagggtagaagattgtttggagaggccaagaaaaaaaaagttcttttggagttcagctgaactcgttgttaggtcgtttgcccctgatttagattcgattctgaggtaataaagttgcggaattgtggatgtccggaggatatccgagggttttatccgctcaatttgatgtgatcaagcaaaaaattcgtttctttttatgtttaaaggccttaatactacacaagctagtagtagtttgttttcttctgctctactgcaaaagtaagtactccttgtttgcatcccttggtggctttccagtacctaccatctgatgttgtagctccttggaaactgcttgcttatccctttgtcatgataagaatgtggtgtgaggaagaaacctgtattctttgtagttatacgctttatttgctttccttaaactctgtctttgtctgatttaatgtaaatacaagctgtcgcgcgaattcgttatcttgtcatgacttgtcaagaacagaagaacagtcctttctatgaagaagttttgagcctattgtatgtgatcggtagtgactaaggaatgctgatttggatttaccttcttgtacttgtgacattgcagaagatcaaccgtctggccgggagcctagagttgttaactacggtgtttcagagtttttttgttatctcttctgctgttgtgctgacttctaatgggatggggaaacaccttaaccaggcgcctcaaagtcttttccatggccttgtttatatacttcgactataaggtgtggttgtatcacttcttcatgctgttctttcaataaaaagtctcaatccattctactagtagaagcagattaacatcttcttgaggtacaagcaggcagttcagaagagagttaaatgggttggcgctggtaaaaaggatgctatatggacaaaaacacacgagcgaaatgctcgtcgtgttctcaacctgatgatagagttagaaggtttatgggtgaaaatgggacaatatttatccacaagagcagatgtgcttcctgaaccctacataaatgtcctcaagcagttgcaggactcgcttcctcctcgccctcttgaagaggttcatcctcataactaattttgcttcatctgtagtcaatccaaatattaacatgtagctaatcgtagtcgttaactcaattcttgtctctcatgttcaggttcgtggaaccatagagaaagaacttgggaaacccatgaatgatctgtttgctaattttgtgctggatcctctagcaactgcatcagtaagttctgttatattggaatgaacttctttcatctgatggaaattcatagtatgttttttttgacgaaatcctcgagcaacttgctaattttttttgtcatggtagtatgttcatacgagtcttcatgtacttttgtcagatagcacaggttcatcgtgcaactcttgtagatggcagagaagtagttgtgaaaatccaacatgatggtatcaaagatatcatattagaggtttgcctctattctgaaaaaacggacttatgtaaaatgtgcaggattgctatatcattttcttaatgttgtcaggatttgaagaatgcaaaatcattagttgaatggattgcatgggcagagcctcaatataattttaacccgatgatagatgaatggtgcaaggaggcaccaaaggaacttgatttcaaccatgaggcaggtaattacccctttcagttctcatactcctctctccatataaaagaacatgcatgctcttgtgactcatccatattttttttaaaagtaaaggtctagtcactaatgaacatatcatcctgataatgtatgctataaaatccttaattttagagaacacaaaggctgtctccagtaatcttagtcgaaaaaccaattgcgagagtggtgctgtctctagtgctgttgacgtactgattccagaagttattcaggtctgagttcttttacttcatcctgtttgtcatcgtgtcagtttttccggttcagttgacagatcatctaatccattcttctttgtgtaccagtcaactgataaggttctaattttgcaatatatggatggaattcgtttgaatgacaatgattcgttagaagcatatggtgttgataagcaaagacttgtggaggagataacccgtgcatatgctcatcaaatatacgttgatggcttctttaacggcgatcctcaccctggtatttcaattttatgtgccttgaagagatcttctgtcacctcaatttttttattctccatctgtaattcttgcaaattcatttgtgctgacaatgcattatttttctgtaggcaattttcttgttagcaaggaacctccacacaagccgattctccttgattttgggcttactaaacgcatatctcaatcaatgaggcaggcactagcaaagatgtttttgtcatgcgctgaggtttgacactttgatcttctaaataatacatacacaaggaaacaaataatggagttaatcaaacatggttgtcttgttggcatctacaagctgcagccatttccattggagtagatgcgatcttttattataacaagaatggatttttgtttactttccgatctttttgtatcctagtttagtcctatctttcagtctttactcataagtggtattgcaaagtggcagatgaatatcacatttaacaagctataagaaaacaaagacagaatctggaactaatctttattttcttctctactatgctttggtgttccttgaatcaactttgagacttagaaagtgcactggaacgttaagtgaccacatgcactagtattttgacgtgtcaaaatttgataattaaaattttgtgagatagggttcttcggtttattctaccttttgctgtttgtgaaccagttgctcatgctatgattaaatttcttaaactacatttctgatatttaacatgtcaatgggtagggagaccatgtggcactgctgtcagcctttgcggagatggggcttaagctgcgggttgacatgcctgagcaggctatggagatcgctacagtattttttcggcagtccactacagcaaatgaagcaaaggtaggaggctaccactactgtaatctgtatccctcctcttgtattaatttggaagtttggattaactgtttggttatgacttttctttaggagaacataaagacattgaatgaccaaagagaacgaaatgtcaaggcacttcaagaaaagatgaaaatgaataaaaaggaggttcaacgtttcaatccagtgagtaggcatgccttttacttcatatgtgtttagtttgtcaaccaagaaataggtgttacatgaacattttctcgcctttaggttgatgctttccctggtgatgcaattatattcatgagggttttgaatcttcttagaggtatgtttttcattctttcctttgaaatatccagtatcatggtaacatgctctctattatctgcacttatgcagggctatcagcatcactaaatgttaggatagtttatctagacatcatgaggccatttgctgaatcaactttgctagggtgagatgcctgtttatctactgtttgcaggagccttagagtaaagcatcttttttattgcttatttatgccttcgttgatggtaggagtatgacacgtgggcccacagctaacagtcagtggatttatgactcacctgttaactcagaggtggagtctaaactgcggaaccttctgcttgagttgggaagcaacaaaattttaggaatacaagtaggttgataatctcatgcgattcatttacatgctatgactttgcttcattggtgccttacaaatcttccttttaccaggtttgtgcttataaagatggaaaggtcataatagataccgctgctggtacgttagggaagtatgatccacgtcctgttcaacctgattctctctttccagttttttcagtgacaaagggtatcactgctggcatggtgcattggcttgttgacaaagggtgagtgcttaatcacaatgccaagttttttttttcttaacatgctagtgtaaatatgtttgcaggccgtcgtattacagtacattatactacctcagattccaaataagtcgtttagacttatgcacaagaattaagaaaacaacagaactgactattttaccctacacttatactacatgaaagatatgaatcatttatttgttgagagagctagcatttatttgccaaggtcaagcatggaagagaagatgaagaagtggctagaagttccaaaacgacttatatttagaatacctcatcttagtagcttactagtgtatcaaaaataatatttggcctaacagtaacgagcatggtagtatgccaccctgtttaagtaggcctcctcttgatctactaacattctaacaaaataaagatattccatctttatatacatggcaaagtcactcacatgcgcaaacaacttttattctgaagcatcaaattgttgtaccgtatttctgtgagtctatgttgaacaataaaaatggacatggagaatgggtgccagtgttcccatgattaggctgaaccatgttagtgcaggtggcaatccttcacaattatgacatgtgagtcactgttgaaacataaaatttagattggtgcagtgtagtttcctgcagttgcatccacgttatccaggtcacaatatttcttgatattatctacattctagtgcttaaaaagtataaagcatcagattcttgtataaagcaagcaactcctctaaatctctaacagtgatggtactacagagaacattgagcatcttttccctgctaccttaggcttttatgtgcattgcaatccattagtgacaggctgagaaaggcctggggtcttctggctagcaccacaagatgtgggctagccgacccaggttcaagcctcacccctcttgataaattttgatatgagaatctttcctctcatatccagtgtttttttattattagtgacaggctgacagcatactgttatctttcaggaagttgaagtatgaggagactgttgccaatatatggccaaaattcggaactaacaaaaaagagctaataaaggtactagaacttctttttttgttgtttgttgaaacactgtttcttgggattaacagactctgatttgcaattttctactaaaggttcatcatcttctgaatcatacatctggtttacataatgcattgggagatgtgatgaagagtgatccgttgttggtatgtgactgggaagagatgctgcaccagattaccaagtgtacgccggaaacagaaccgggttctgaacaaatgtatcactacttatcctttggttggctgtgtggtggaatcatagaggtatgtctctcccgagcatcacatacaccgagttcatttattttcaatgggagtactgaacctttttaactggatcagtggatctttatggcttcacatagttatactaatttttaatctggttatgggcttaattaaatgcacagcccaccaagttatatttttttggttatgggctattggcaaagtagaggtaaataactgaaaacaacacgtgtttgtatgtcactgttctgtgtgaacttaatttcatgaatcctaacgctgatatttggtgataatagcatgcgtccggaaagaagcttcaagaggtcctagaagaggccattgttcatcctcttcacattaacggggagctatatattggcattcctccaggtataactaacaaaacttcccagtttagctttcaacaaaataggtgtacgcattgatataatgatggatattttttttttctacaaatccataaacatattaaccttttcgagacgtgttcatgtcatataagtttgatgagtgaaaaaattgcgctagatacttaccttttttttgcggggtgctatattcttgctattattactgttccaaagattatttgaaaagagactacaatgcatatgtgaagtacagtcatgagttcgatgcttgtccaaagaacgcattttctctgtctctggcttgttttgacatgttccataaacatactcacccacgcttttggagatgtgttccataggtttgatgagtgaaattgctgctatattcttaccgttgtagataatatcctacatgtgaatatgtgatgttcatcgattttccgcccttgtcaggtgtcgaatctcgccttgcggcactgacagtcgacatggaggagctcgagaagctgtcaggattcagagcaggaccagacgtcccacaggagctgctcagcaatgtcgcccagatggccaccggcctacctgtcctcttcaacacgctcaacatccgccgcgccatcctccccgctgccaatggccactgctcggcgcgcgctctggctcgatactacgccgcgctgggggcaggcggcgccattcctccgccgcactccggtggtggctccaagccgccactcggcagccatgtccacacccccaagttccccaccatgccgtccaagaagaagaagaagggaggttcgaagaatgatgtcggcgtcgctgacaaggacgggtacacccagctccgcaccagcgacggcagcgacgaggggtcgacggtgtcagcggtggtggccgggaacggcagtggcagcggcagcagcatgttcgtcgacggcggcaccaagatgctcgacgcgttcatgggcgtcggcgacttctccggcatgatccacccgaacggcaagttcgggctcgggttcaggaggtacggctatggcgccggcgctggcgagaaggtggcgacgacgacgttcgggcactccgggatgggcgggtcgacggggttctgcgacgtggagcacgggctggccatggccgtgacggtgaacaagatgtcgctgggcggcgtgacgcggcgcgtggtccggctggtgtgcgaggagctgggcgtgccggtgcccgacgagttctccgtcgccggcgacaagggccccgacatggtgctcaacctcgcgccgccggagtagcaccaacctgccaggccactactactgacatttcatcatacactttgatacatatacacatgtagctaggtaagagtaaactcatgatgatataacaaaatgaggggaaaaattaatgttctttccgggtatacgtattagtacaatatagtagtacaaatttatgccatttggatgtggcttcgtcatatatactccaaattatacatgtatacaagatttttgtttcatttttcctgtttacatttgcaactgtgaggtgccaagtgatgccatgttggaaaattcgaatatgctgttgt</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0701300, RefSeq:Os06g0701300