Os06g0702100

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Revision as of 09:33, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os06g0702100| Description = Zinc finger, CW-type domain containing protein| Version = NM_001065023.2 GI:297606455 GeneID:4341974| Length = 8106 ...")
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Gene Name

Os06g0702100

Description

Zinc finger, CW-type domain containing protein

Version

NM_001065023.2 GI:297606455 GeneID:4341974

Length

8106 bp

Definition

Oryza sativa Japonica Group Os06g0702100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:30464437..30472542

Sequence Coding Region

30464437..30464461,30470411..30471023,30471495..30471548,30471722..30471873,30472265..30472542

Expression

GEO Profiles:Os06g0702100

Genome Context

<gbrowseImage1> name=NC_008399:30464437..30472542 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:30464437..30472542 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcagtggaggcaggccaaatctggtaaaagacagcatgtcatgaggactttccaaggtcataaccccaacactatgaaagttcattctcgcaagtctcaaccttcaaaaaagaagcctcgcgagttctatgacactgttgaggtacacattattgatgatgacagtgatggtgatgcgaatatccacaaggattactcaatggaagacacatcaaagcaccttgtcatgtacaatcctgagatcacgtatgacaaacaaggggaagttgaagttactgagcctatagataactatacttcgctgaaccaaagatacatgaagccaagacacggatataacactgttttaccatctatcggtgcttacaccgtgcaatgtgctcactgcttcaaatggaggatcatcccaacaaaagagaaatatgaagagatacgtgagaatatttgtcaggatgtgtttgtatgtgaaagagctcgtgaatggaaccgtgttatatcttgcgttgatcctgaagatatatcacaggatggaagtagggtgtgggcgattgacaaggcaagcatttcccagactcctcctggctgggatagagaggtcagaatcagaggagagggttgcagcaagtttgcagatgtgtactacacttctccaactgggaagaagttgaggtcattggtagaagttgggaggtacttggcagagaacccacactacattaggcaaggggttaacttaacccagttctctttcgccacccccaagcctctgcaagaagactatgtcaggaagcatacatatgcagcaactcctgaattaccagagcttcttgagactgcgcaagtggatccactctgctgggcagcaccccctacacgcagcgaactgcttggtgagcttggtgcttcaacctcaagatctgttgatgtcagccagtctgaggtgtcataccctgtagacttgcaccagcccgaggagtctgcgccactacctccacgcacaaagaagaaaactatgaaacgagggcgagtgtcagcaacggggtctcaatcgactccacctggttcatccaaagatcagtctggaggatgcgtaagcgacgtcgagtttgtttcgctgtga</cdnaseq>

Protein Sequence

<aaseq>MQWRQAKSGKRQHVMRTFQGHNPNTMKVHSRKSQPSKKKPREFY DTVEVHIIDDDSDGDANIHKDYSMEDTSKHLVMYNPEITYDKQGEVEVTEPIDNYTSL NQRYMKPRHGYNTVLPSIGAYTVQCAHCFKWRIIPTKEKYEEIRENICQDVFVCERAR EWNRVISCVDPEDISQDGSRVWAIDKASISQTPPGWDREVRIRGEGCSKFADVYYTSP TGKKLRSLVEVGRYLAENPHYIRQGVNLTQFSFATPKPLQEDYVRKHTYAATPELPEL LETAQVDPLCWAAPPTRSELLGELGASTSRSVDVSQSEVSYPVDLHQPEESAPLPPRT KKKTMKRGRVSATGSQSTPPGSSKDQSGGCVSDVEFVSL</aaseq>

Gene Sequence

<dnaseqindica>1..25#5975..6587#7059..7112#7286..7437#7829..8106#atgcagtggaggcaggccaaatctggtcagaaaaatacttgtctgaagatttgaaacggtccatgattttctagtaacacaattagattaattaagcaagcttggcatatcattagctcaagtaaccaagcaacaccatataatggagtagttaaaagagatgctgcaaagttcagagaatatgaaaatccatggacctgaagctgtcgactgataatgtgaccaaaattcagaaactggttagctaactgaactgcaagcaaatgcgttcagcacagtggtggaccaaaattcacgatgatcgaccaatttttacatatatcagccttcaatcatgagttcgatcgctgttcacctacctgaattttcaccgattatcatgcttggttttgcatcctgaaaccagaggctgcaaaaagaatgtaatgcacatcagttagcagtagctgtcccattccagatacacgagcagtcaacagcaacagatttcggtgtcaggtctcacgttcagacccacggcgtctacacgatttcaagaatggctgcaatggcatgtcaggttgggtggtgaaagcgagataaagagatgccattacatgcatgatcaacaagatgattatgatgcccctgcttacagaatgattacaaagttgtgaaggagaatcactgggtcgtacgatgctttgagagccctgtgatcttcctctttctggtgcaggaaaggaacttgtgttgttcatagacacatcattttcgtgatatactctgcaatttgcagcatgtgacatttttgcatacatgtggacatggttcctgctgaaaaatggaaaaatgccaaaccatttggttatcagtttgagatttttttttttcatcgatgtgaattgtgaactactaattgagagttgctgcttcaggctcaacctcaacaaccagcagccatgaggattgacgctggcaacctaaacgagatttggagggagagacatccctcaaaacatttttaagaagaaattatgagtgtattggggattgaacacgggatctcggggttaaaactatacacctcttgctactacactatcaggtacatctcttatcctggcaacctcaggaactgttgctaacaatcataaactagctgcagattggcgccgttaattttcatctccaaattccatttgagctggccgaaatagcatataaacaaggtgttgcaccacatgtaatgagtaattgtgtaattgcacttgcaacctcgtatggaaccatgtactggagattaattgcatgttatcgccaacggattgttaaacgtaaattaatgtcgatcaaaatgcagtatgcttttctcagtctatatataacaagttaaagtatggccttaagagttggaattgttgtgtataaatacaccttgaggcagatctggctgggttgattagttagcatggtaattagccaccggacttcgcattggctagtcatatccttgaatggcgtatactctatgttgatatacagacactcgatctgtgtgagatgccgggtttgtgacagcctatgaaacgccaaaggatgaaaaatataagtcaaagtggttatcatgccaagtgagccagaacttatagacgaccaaagcattaatctttacttttcaaacggttgctgttcttcaattaggccggtaagaataaatagattagtttgacctttggtaagacacattgaggcatggatcgtttgttcttgcccaatgaaaggaaccaacgattttgataattgtcacatggatcatggatgcagggcgccggtcttggttgaattttgcaactggaaatcctcctcattctgctgagatcttatacatttaaaaataataccgtggacctgctgaaaagttgttgtttgcctatgtatcctactacaactctagaacacaaccgttaaatttccgtataattaatttcgattaatcatttggcgggacctttttgtccgacaaccgtattccgtttcccacgtcgacactgaataagagttcatttaaacccaatcatagagaacaccccaaagaccccaagcatataaaacttagaggacaaaattcccctctaaaaactctcatcggccaaataatgcactacgagtgtcatgtgccaaacgcactagaccactagcggagtgtcatatggtaaaaacatgctttcaaatatcctaccacaagtgccacataaatatatgctccctccgtcctaaaatataggaatttagaatcagatgagatgtttgtccatatatattgtactagcaaacgtgttccaggttcttatattttgggacggaggtggtatatcacaggccatgtcaatcacataagagtttcttccatataggccctgttcttttctccaacaagagttggataaagattaagattttctccaacaagagttggataaaaattaagattttcgtggcacgttttttaaactgctaaacggtatgtttcgtgcgaaaactttctatatgaaagttgctctaaaatatcatattaatctatttttcaagtttttaataattaaaactcaataaatcatacgttaataccacctcattttacgtaaaatacttaatctttatcttcatcttcatcttcaagagaaaagaacaccaccatgttcttacactggactacgtataccatcaaatctttcaggagggctcttgcagcgatcatacggtaaagtactcagctgcgaggggcttaattaagcttctcttgtgatgaccaatagatctgcacattagataaacataagatttttcattcacgtacggtgttaagtttgcacagatatataagtcatgaaataataagctcacctgcagtgtgccggtgatcagcaaacatactgatcatctctgcgtctatctccctcgtcttcgtacatgcgcctgcgtcttaaaagcaaatgagtatacttcgaaacagggttcaaattgtcgttttcaggttatactggaattaaatttcggcctgaaataatttaaaatttgatcaaaatttagtcaaatctgaacaaatacacaaaaaaaaattgaaaagaaatccaaaaattccgggcgaaatcatttcatatctatagacccgaaattctgaaccctgtttagaactccatcctatagatcgatcaaggtagttaagctagcttgcacagcgatgaggcggcgatcgaggagagaacgggacgtcggtcaccagcagcggtggaggagcttgcacgctggtgctgctgctccggggagtagaggccgtagcggcgagtgtcgccggcgtgggggcggcggcggcgcgggtgggaggtcggggacgaacatggcggtctagggttttaattttgttttggaatggggaatcgagaggttgacgacgtggggtggttggagttggagtaggagggggaacgcgaggtcgcgaaatatgggccgggccgggcccatctcctcctcctatatggattccgaatgggccttccagaatacaaatggatctggtggaaggcccagcacagcaccaaaatagaacacattgaccttttttttctctctttttggcaaaaacattgactttgttggagttatggagtactatcatgttttgtcagattttaaattgggctcaaaatatttcaacttcgctcaaaaagaaaacggaacaggctataggcataggatggagcgtagtttgggccacaccgcaactcccctctttaagttagatttaggagttaaaactctactaaatgcactcttaaattagactttaatcgcacatatacgtactagcatatagtgcctagctagctactcgaggtttggtttattttgggacgaatggcgtatatctagatttataatactattatgtgtcacatttcgtacgaggttgatttattttaaaaccatgggtgtaatatgcccagtaaagccaccacggctcgcccataactccatattctttatgaccggcctctgctatgataaacataatctagaggttcacctcaagatttggcttcatacagcatatccgggcatttgagatactctcttcggtttttaatagatgacactattaacttttgaacacatgtttgattattcgttttatttaaaaattttatacaaatatataagatactctctccgttttagattataagttgttttaactttggtaaaggcaaattagtttaaatttgaccaagtttgtagaaaaagttaattaaattttcatctcaagaaaaaatattatgaaaacatatttaataaaactaatttagtgttgtaaatattactatatttgtctacaaacttgatcaaacatgaagtagtttaagtttaaccaaagtcaaaataacttataatatgaaataaagggagcataaatcatgcttaaattactttgaatgataaaacaactcacaacaaaaaaaatataattacgtaaattttcttaaataaaacgaatagtcaaacatgtgacaaaataacaacgacatcatctattaaaaaaaatacttcagtacctttatataattatacaaaagttttaaattagtaaatgatcaaatgatttacaaaaaatctaacatcaacgtttattttaaaaggagtagtactctatagtagagcaagttcgatagtatagctaactgctaagtctaaattatctatagttaatttaatagttaatatatatagtagttacctacaaatatatacttatagtgtactgatacatggtctgatacttggggctcatagctagcgcgtgcgcgcggctagcaagcacctccccttaagactttaactacatctattaatttattagttaatatttaacactaatgatactagtagtaattagaaaagattctgaagatttttaagagatttttttactaacagattgaaaatttaattttttaagttagatttgaaaacttttgatttaagtttcaaattttaaagtcaaattttgaaaactttcaaaatccagatttgaaaaatttgaaaacttttaacttgagatttaaaaattttcaactcgagatttaaaaactttcaacttaagattcgaaaactttcaagtctagatttgaaaattttgaaaactttcaacttgagatttgaaaattttcaactcgagatttgaaaactttcaactcgatattcgaaaactttcaagtccagatttgaaaattttgaaaactttcaactaagattcgaaaattttcactcgagaattgaaattttcaaggctagatttgaaaattttcaagtcaatatttaaaaactttcaactcaaaacatttgaaaaaagcacatttgctattggctaggaaatagtggggatggtggatgcatcgagtttgttgctagagtaaatatagtatgagagagttattagcttttcttggtcttagtgtacctatgaaatatatagatcaatttggaatggagggagtacttaggtgcagaaggaaatgatataacttttccccccagattttctgttacttcatgttttaggtataccaatatttttgtgtacttggttgatctgtgcactagcatataacaattatccggccatcaaaatggatgaattttccatttcatcatgtgaaagacataataactggaaccttatcaaagacatatacttattagttattgcatgaggtagttaacagaattgattgctttcattccccagctttcactggtgatgaacttcaacttcttgtatataatctttttgatgctgcagttcatgtgatgtactgatttccttctggtcattgaattactatcatattgtattgttttctttaacggggaacagaaagggataccctttctgaaatcatgctgctgttattgaaccctgtgttccttattacaggtaaaagacagcatgtcatgaggactttccaaggtcataaccccaacactatgaaagttcattctcgcaagtctcaaccttcaaaaaagaagcctcgcgagttctatgacactgttgaggtacacattattgatgatgacagtgatggtgatgcgaatatccacaaggattactcaatggaagacacatcaaagcaccttgtcatgtacaatcctgagatcacgtatgacaaacaaggggaagttgaagttactgagcctatagataactatacttcgctgaaccaaagatacatgaagccaagacacggatataacactgttttaccatctatcggtgcttacaccgtgcaatgtgctcactgcttcaaatggaggatcatcccaacaaaagagaaatatgaagagatacgtgagaatatttgtcaggatgtgtttgtatgtgaaagagctcgtgaatggaaccgtgttatatcttgcgttgatcctgaagatatatcacaggatggaagtagggtgtgggcgattgacaaggcaagcatttcccagactcctcctggctgggatagagaggtcagaatcagaggagagggttgcagcaagtttgcagatgtgtatgtcactgtttcctttcctggatttgcagtagtacgtgatatttggtaccatatttttggccgtttccatattcggatatcaaacttctttctttatgtgcctaatagcatcttcatgttaatcgtggcacactggtcctgtttatttatgccttgactagctgctaactgctaagattagttaacactttctaaataattagtgcgatctcaagtttattcatactagtaccacctatgatcatgaaacttctacagttttcagttaatactttgtaacaccatagcaaatatctcactaattccttatgatatgcctgcttgaataatgcaaacagccattattatgtttgccagtttcctcaggaactttttcattatatgatatttcgaacagcaacattgcttgtaggacacacaagatactcgaggttgacatatgtgaaatacttttcttttttccttcaggtactacacttctccaactgggaagaagttgaggtcattggtagaagttgggaggtgggattcatccatttgtgctctttttgttgcatattttgtgtggctagtgtattacttggggtacctagttctagttggtctggtacaacaaaacgaagctctggaaaagctctggaaagttcttgaaatatttcccaggaaatgatgtaattattatgtccatattctaggtacttggcagagaacccacactacattaggcaaggggttaacttaacccagttctctttcgccacccccaagcctctgcaagaagactatgtcaggaagcatacatatgcagcaactcctgaattaccagagcttcttgagactgcgcaaggtgtgttatcagtcctaggtttgttacatctattctacttttttttcatttttaacttcttgttccccacattgttggaaaggaggcgtgcttcaaacaaggtaagttgctgcgcaaatggcacagttggaggtatctttgcaatgcaagcatgtctagttattttcagtcaaatgagctgtgagaagtcatgtactcatgatgcccttgcattttgctactttacatcctttcttgatcttagcaccatctaaatatcatttagtgttgtgatattaactgaatatattttcccccagtttcatcccatagctatatcctgtcaaaactacctgttcttgggagcttttgctgatatatttgttattgagtatacattgttatttttcagtggatccactctgctgggcagcaccccctacacgcagcgaactgcttggtgagcttggtgcttcaacctcaagatctgttgatgtcagccagtctgaggtgtcataccctgtagacttgcaccagcccgaggagtctgcgccactacctccacgcacaaagaagaaaactatgaaacgagggcgagtgtcagcaacggggtctcaatcgactccacctggttcatccaaagatcagtctggaggatgcgtaagcgacgtcgagtttgtttcgctgtga</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0702100, RefSeq:Os06g0702100