Os02g0266500

From RiceWiki
Revision as of 19:12, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os02g0266500

Description

Similar to RASPBERRY3

Version

NM_001185963.1 GI:297721058 GeneID:9269607

Length

8544 bp

Definition

Oryza sativa Japonica Group Os02g0266500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:9552630..9561173

Sequence Coding Region

9553450..9553455,9554874..9555050,9555411..9555548

Expression

GEO Profiles:Os02g0266500

Genome Context

<gbrowseImage1> name=NC_008395:9552630..9561173 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:9552630..9561173 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>aatgaggccgaactctttgttctgagactatctcgcaacagtggtgttttggggcttgctggtacagcctttgtatctcagttgtttgcgcctaatctaaaatatgatggagataacttcagtcgttatggtgttattcttgtccgtcccatgcttgaattttcaaaagatgacatgtataagatatgtcaaggaagtaatcatttgtgggttgaagatccaactaataatagtttgctgtacgttaggaatcgaatccgggcatctttgagaagtttatccatagaaggttcacaattgcacttaagctgttgcttttga</cdnaseq>

Protein Sequence

<aaseq>NEAELFVLRLSRNSGVLGLAGTAFVSQLFAPNLKYDGDNFSRYG VILVRPMLEFSKDDMYKICQGSNHLWVEDPTNNSLLYVRNRIRASLRSLSIEGSQLHL SCCF</aaseq>

Gene Sequence

<dnaseqindica>821..826#2245..2421#2782..2919#gattctccggcgactccggcgatgatgccgctcctcctcctcctcctccccgtccgctccgcccctctccggcgcctcctcctatgccgctgctcctcctcctcctcccccgccgccgccgcctcggcctcgtcatccgcgtgccccgtccccgcctcctcagtcctcgccccgtaccaccgcgccttcgcccgccgcatggccctcgccggcgtccacccgcaccaccgcgtcggtacgaatgcggcgtcgctttattggttttcttgctgaacgagtggctctgaggtatggttggttggctggtttgcagcggtgggggtctccggcgggccggactccatggcgctctgcgtgctcgcggcggcgtggaagaaggccggggaggggagggagcaggaggatgagggagagggcggcgtctcgggattcgtggacgggctcctgggggtcgtcgtcgaccatggcctgcgccctgagagcgccgacgaggcgcagctagtccgtgatcgggtgcgcggcatgggtaaatcttacttatggattaacactgtataatttctttattttaacacaaatttactctgcacctgcgcacatagaaaattgcaatgatgattggcttccgttaggtctgctccttgagttgcatttgaatgggaccttttcttttgaactgttttttttaatgcgacttgatccacaaaatagacattttgaggtgccacaattttgttgtaggtgttgtttgtgagattgctacatgtgaatggccgaatgggcgaccaaagctggggcatattcaagaagctgcccgtgaaatgaggtgtgcgtctccctctgccatggttcactacttgtcaaggataatgctatctgaacaatttgattttctgcaaacttagtatttgtggttgatatggccaattttttttatgtctcatcgatttccaaaacttacatgcatgctgtatggatatctgaaaaaaaatgtacctcacctactaacaactttgtatgaaatttgtgtagaccatttacttgcacaaagtgttaggagttaaggggctttcccttctctttaccggcacttaaggcattagatttagttgtttgttatacttaagagggcacatatgttagtattttgaactgtgggttgtgtaggcgtgtgttgtatggctttatttgccacttctcttatatgaaatgatacatagctctccggcatgttcaagaagaaaaataatgaatattttgttttgtttagttaaaactctgaaccttacatgttggtattagtgcattattctcacaatatattggcgctgagggtatcaggaatgttctttaggattcttcatggacattacctcctgcacaatgtgcattttttttttcaatttccagtgttgagaagctgtaaacttgccacttcaaaagtaaagagtgacatggttcacactgactactaaaatatatggaaatttagtatgctatggcattgtgaaaatgaatgctatgttcttcatgactgtatatatctacctgatatatgctctgccagttccataccaatttattcacaaacacagaaataccttagtgcattttaacaagacttcacattttaataaattcaggtaccaaaaactgttggacatttgtataaagcaacgaatagcagtcttgcttatcgcacaccactctgatgaccaggtctgttaaattgagagatgtatttttcctttttcccttggttttgaatgagtgttgccccacttatggaattgtgagttaacacataaaatccttgttatgtaaaagcattgagccaaatgacacctgttatcatcgtcaaataagcggtgctaatttttttctcttatattttaagtttttgtggacttgacaacttgcatatagggaactattattagatatgatactattgtgccttcatgtattactgtatctttgtttgtgcatttactctctaggctaacatacattgtcacatgaatatctgatatcggatttagtggaccttgcactgatccttgaatttagacatggttaccttctaattgtcgtagtatccaatgtggtattgaattaaagattactgaatctaatgtatactgacatctttctaccattctatgttatgattttatgccattatagttactgcagatgcagattatatgttttctctgagtgaatttaggcttataaatgcaggccgaactctttgttctgagactatctcgcaacagtggtgttttggggcttgctggtacagcctttgtatctcagttgtttgcgcctaatctaaaatatgatggagataacttcagtcgttatggtgttattcttgtccgtcccatgcttgaattttcaaaagatgacatgtataaggtaaatcatgatctcatgatatttagaatcagccttgcattttacttgaggagccttatcttacttttatctttcaaatatagtcaatatttcatcattagacacttaatttgaattttgatttcccaaaattcatttaacatgctgtatttaatgagttcagcttatgtatgtttctagaaattcctcaccaatattcctaatttctcctgctgactagcctttctctgaaaaagcaacatagccttttcttgtaggagactttgatgactttgctttgagctgtcatttttttttaaaaaaaatgatcatatttgtgtagctgttactgattgatctgtcatacttggttctccacagatatgtcaaggaagtaatcatttgtgggttgaagatccaactaataatagtttgctgtacgttaggaatcgaatccgggcatctttgagaagtttatccatagaaggttcacaattgcacttaagctgttgcttttgagtgattttagaatcatcatgttgaatcctttgtcttcaactttacctcatttatatcataatatagatcattcacagatgatgattgatgaaaggtgatgtccataaacatttgacaaatgtataaagcttgattgagcatgcgtacgttttactcattataaatttcaatgaattttccatcactattaattatcaaatgccatgtttggtcacaggaacaacttgttctattgaccatccgcaattgggtaattctgttgaataataactgactattgactgtagatacaccatcttctggaatcagcataaatgtttgcttgtgtgcaccaaattgtgatttttcatgtttcttgtctaggttggtctgtacacaaggtctatttattttatagtaaataaaaagtgtgtcagactatcagtggcccagaattcatgggtatctagctcaagagattgtatttagttaaattcacttgtggaagtaggtcacagaatttgtagcaaatgacaacattttcactgtttcacatgttgccaattcgtggccgaagttatttgtggcaagtcctagctccaattggtatgtgtgaagctacatcagctctggccagcttgtctgcagttgtaaatttgcaaacgctatcaccttatgatgagcgatgaacgaatgcacattcagctgacaaattttgcttatctacaggtacctttcagtcagagcttcacaaactgatctatgcgtgccggttgacacgagcatttatagataatgcctgcagtatggttttaaagaagtctttaacaataatggaggtataccctttttctgtaattcgatgtctcctatatcatgccattactaaaatttatatactaactcttttcccccgtaaaattcatttatcattctgcagcatggatatgctgtcattgacctggaaaaacttgacccacataacgttgatgatctttttctttcacgatatttagcatatgtattacaggtacgtcttttgggagaaaaaaatattctgaagtttgaagatcttagacaccttattgccacgggacattgattcatttttttctccattgtagtttgtttcacaaaggcataggccactccgtggtagatctgctcaattgctcatagactacatccgtaccatcccctgcaaggttccttctagttgatgtgcatgtgtactgcttacatccttaagtttttatttctcttgtgtgtaatttttttggtaaatattactgttgttgattggaagcccaatcaacttgaaatgaaaacaagccctaaggacctgttcaaagttcacccaagtctggtccaaagtctgaattgaaaattaatatggacattttatacttcctttccagatcaaagatgcttacatatacatacatatatttttctatgcttgaaataagtcattgatctctcttagattcatcgacatagccatctgatgatgacgatagcgaactagtaattcttacgtagcacataggcacaattgcaatctgagtttactattattttgtgcagaaaaagattttcttgtacgtgttgggttatctcatttgctgaactgtacgatagcatttcatgtgctaacttatggattaccaaatcctggtctagcaccaaataaagattactcattggttcccccaaaacatgggttaagaatcgacctatggagggtgggccctaggggcctcaaatcacgggttaaggcctgatctgtagggggcgactccttgtgtaggggggaccgtctattgtgacctttctcggcccctgttgatcagcgtataacgttgctgcaccgagaccaagaaaccaaatcaactctgcatgcacatcatttatagctaattctccctaattagcatgcagctcaacggatttattctgcatgcatctcaacgcatgagacttcaaaagactctgcatgtacatgcatagcatgcgaggcatttactacaacctgagaaaacgctagtacctagtttatacgctgatcaatttggaatatttgaaatttggttaggcgctgatcaaaagggaatggagggagtataatacattagggaggtctttccctttggggccgagttctttctcatctttttattattattattatattagaaccatagaaaatactgttatatattaagaaggtttgtgaaaatattgttgaagtatttggagatgggtacctgagatctccaaagaataatgacacagctagattacttgccattgcagagcaagggggttttctcggaatgctttggtgcattgattgtatcacatattaataattggaggatagggggagatagaataaatgaatcattgatacaatcaatgctccctagcattcctggaaaacctctctactctccaattggaagtaatctatctatgccattatcatttggagatctcaagtactcatctccgaatacttcaacaatagttttcattcacaaacattttaagcttatgacagtattttctccaatttcaatattgattatccatagcatctcttggtactacataagttcgcattcaaaagctgctgtacacttgtgcaaaagatataacccaagacctccaacaatatatctttttttgcataagatactcatcatgttcttctacagcacatgctatgttaatactcatcatgatctctctataggaaaagtactattgggtaattctgtactttagcaaaataagatccttcatggttcattcagttctgcttgaatctcatgcaggctgccctgagtgtagctggttgttacctttgtgcagttccaaggtccaaaggtacaaaagtacttgtctgttgttctgttgatctgatggagtcatcttctgttcatatgtcctataagtgttcctatgtaaagcaaccaccaccagtatccgagatcaaccagatagtcactgaagcacgcatatactctgatcaatttcgacagaactgcccaaacacaccttttccgagctctaaattttcaactgatgtgctgaataaggcaaaggatctcaagctaataggtgattgtacattagaaaagctcaattatttgcaaacagatgaacaccaaaaattcattacaacaaaagagcatggacaagaacagtacttggagaaaacaagctttccttatttagaagttctaaatctctggcctggtgaaacatgccactttatgggcaggttcttgattacatggagaacctcggaggttgttgtgaatggaatgtgcttgcatgacagtcaaaagcatacttgccagtattgtatggtaaatcaggatggaagtcttgctattaggcatatgttcgataccgattggttgttccttgctgaagtttgtaagatccattctttggaagagaataagaattattcaaatgctctctgtgacaagttggaggatgctaaactcgtgcagcactctagatatttgcaattgtcagcaatgaaatctcttcaaatcctgagatctattccagcacctgcaagacgaatgctaccagtgttgaccaactcgcaaggtgctgtattgagtataccggtaaggattccactcaaaagacattattttgttttcattttgtaattttaatatgttctatttttttaagtacttcattaatccgatgcattgtttttttaaatcaaacgtgagctaccgaaagctaggtagtggtgaactactccaaaccttctaattgcatgaggttagcacagcatgaagcacacatgacctagctgcccttgcatgcatgccttttatttgttagctaactatggaaaacagctgaatatcaaagttggcactttgatatcgatttactataatatggtgagtatgcgaaactccaagagcagtactggccatgcgtggcatagttctcaattctcaaatattgaaaatagtaaaacctgtttttggacctggcaactgattaggaggtctgacttcctagtgattagccaattgcttcagtctgtcacaatttttaacgggttcagtaccaactgaaacagcaggtgactaggaaataggaatatcgtgcagccagtgacttggcttggaacagtgacaaactgaagttgttcataacatggagtagaagtcctaggtagaagtctataaaccatctggttatcttgaaaattgaccagagaattttcatgttgatttcttttctgtccaaaaccatactgtcattctattactacatgtagttactgaatgcacagttttctataagatcaaaggcttcatgattcaggtggcaaagaaaatttacagatatgaagttctgggagatattatatgtagtctttctggaacttgcatattttggtttgacatactcctagcatcgtttatcagatatttgaaggcatgtagacagtgaatgcatttattccttcagagaaaggctttactcctattgtgctaatattctctcttttttcccttcttgttaagagtattggcttccgatgttgcccaagcctattaattgaagcagtattcagtccaagagtaccacttggtggaggatacacttcatatttgtaagtggttgatatctattgatgacaaaacatgaaacatcaagtgtataactgctgttgagatgtaagcagccgctggtaatacaaaacatctgatcaatcttctccctcagtcaatcattatatgcgagctgctaatgatatatactagtatcatgtttgtcccgtataactatttcaggtgctgaatcgcttgcaacaaaccgtccaatcattgccaaatgcgaaacagccttagcttgccaacgtcgttgtgcagttaactgatgtttcgtgatccctggttcatacatatgatgatttgacaagcttgacaagaacgggatttttacacgacatttgcggatttgccagtttgcagggataaatcactacaacagttatatgccagaacaggcccgattctgcactggtttccatctcaacacctgtcgttggacatcagggtgatcatggctgaaatctcgtagcttcgctttgcagtgccaaccaggtgtcgctgaggcaatagcaacttttggcactaggcaagtggaaatgaaggtaccactagatcactgtgagagcaattttgtcagcgctggaggtggctcaagtgcctaatcgttaagaattttaaataggaggatagataaatatatcaagtacctgagcgctggaggtggctcaagtgagatttacctccccaagaatgcatcgcctagcagactcccggttggacatcagcctgtaatttgaagccaagaatcgtttcatgtgaattattcgtcagacattcttactagaaaagcaatgcttaactctacttacgaatacgataacagtgttcaagcagtgacagacaaaacactgtaaatgattgttcatgtcttggtatgtatgccttctcattctcttcacatccaatgggttcgtgctttgttcgcacggacaggacataccaccctccatatccaacagcgattcgctgtcagaatccg</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0266500, RefSeq:Os02g0266500