Os02g0278700

From RiceWiki
Revision as of 19:12, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os02g0278700

Description

Similar to Kaurene synthase A (Fragment)

Version

NM_001053085.1 GI:115445540 GeneID:4329013

Length

10009 bp

Definition

Oryza sativa Japonica Group Os02g0278700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:10302717..10312725

Sequence Coding Region

10302932..10303159,10303775..10304023,10304103..10304229,10304909..10305151,10305259..10305357
,10305466..10305581,10305713..10305939,10306064..10306176,10306302..10306422
,10306541..10306755,10306942..10307125,10307639..10307948,10308055..10308149
,10312232..10312387,10312482..10312602

Expression

GEO Profiles:Os02g0278700

Genome Context

<gbrowseImage1> name=NC_008395:10302717..10312725 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:10302717..10312725 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgattcacctccactccccgccgacggcgcccgccgcattcggcggcgccggctcggcggactggcggcggcggcggcggtggtcatggtcgtcgtcgtcccgcgctccggtggctaaaggtggccatcttcgtccgtgcgtttggcggcgcggcggcgacgacggcggcggcgaggatcatcacgccgacggcggcggcggcggcggaggaggagcggcgtggagggcgcgggccaccaccgccggcgtgtcgagctccagcagtacagccaaagggctgcaagccaacatcatcgaacatgagaccccccggatcacgaaatggcccaatgaatcacgcgacctcgacgatcaccaacaaaacaacgaggctgatgaggaggcagatgatgagctgcagccactggtcgagcaggtgaggtcgatgctgtcgtccatggaggacggcgcgatcaccgcgtcggcgtacgacacggcgtgggtggcgctggtgccgcggctggacggcgagggcggcacgcagttcccggccgccgtgcggtggatcgtcggcagccagctcgccgacgggtcgtggggcgacgaggcgctcttctccgcctacgaccgcgtcatcaacaccctcgcctgcgtcgtcgccctcaccagatggtccctccaccatgaccagtgcaagcaagggcttcagtttctgaatctgaacttgtggaggttagcagaggaggagccggatacgatgccgattgggtttgagattgcattcccttctcttgtggaggcagctaggggtttgggtattgatttcccatatgatcaccctgctctcaagggcatttatgcaaacagagaactcaagcttaagaggattccaaaggacatgatgcatatagtcccaacttcaattctgcatagccttgaagggatgcctgggctggattggcagaggcttctgaagctccaatgcagtgatggatccttcttgttctccccttcagctactgcttatgctctcatgcagaccggtgacaagaaatgcttcgcgtacatcgacaggatcattaagaaattcgacggaggcgttccgaacgtttacccggtcgatctttttgagcacatatgggttgtcgatcggttggagcgtcttgggatatcgcggtacttccaacgagagattgaacagaacatggactatgtcaacaggcactggactgaagatgggatttgctgggctaggaactccaatgtaaaagaagtggatgacaccgctatggctttccgtctactacgcctccatggatacaatgtatcaccaagtgtgttcaagaattttgagaaggatggggagttcttctgttttgtggggcaatcaactcaagcagtcactgggatgtataacctgaacagagcatctcagataagttttccaggagaagacattttgcagcgtgcaaggaatttctcatatgagttccttagagaaagagaagcccaggggacacttcatgataaatggatcatctccaaggacctaccaggagaggtacaatacacactagattttccttggtatgcgagcttgccacgcgtcgaggcaagaacatacataggtcaatatggtggaaatgatgacgtctggattggaaagacactctacaggatgccaattgtgaataacgctacatatctcgagttggcgaaacaggatttcaaccgttgtcaagctctacatcagcatgagttgcagggtctacaaaagtggttcattgagaatggcctggaagcttttgggatgacacctgaagatgttttgagagcttattttttggctgccgcgtgcattttcgaaccaaaccgtgcctctgagcgacttgcatgggctagagtgtcagtgctggccaacactatttctaggcatttttacagcgatatgtcaagcatgaaaaggatggagcgtttcatgtggagcagcctctatgaagaaaatggcaatgttttggggctagaaggatatgcaaaagatggaatccttgcgaggacactttgtcaacttatagatttgttgtctcaagagacaccgccagttcgagaaggtcaaaagtgtattcataatctcataagatgtgcttggattgaatggatgatgcaacaaatcaatatgaaggatggcagatatgacaaaggcagagttatgcatccagggtcatgcactgttcataataaagaaacatgtttacttattgctcaaattgttgaaatttgtgctggacgaattgaggaggcagcatctatgataaataacaccgaaggttcttggtttattcaacttgcttcctctatttgcgattctcttcatgccaagatgttactttcacaggataccaagaaaaatgagacaacaataaatcaaattgacaaggaaattgagttgggtatgcaagaacttgctcaatatcttcttccaagagttgatgatagaagaattaacaacaaaaccaagcagaccttcttgagcattgtgaaaagctgttactatgctgccaattgctcaccacatatgcttgaccaacacatttctgaagtgatttttgagcaagttatttga</cdnaseq>

Protein Sequence

<aaseq>MIHLHSPPTAPAAFGGAGSADWRRRRRWSWSSSSRAPVAKGGHL RPCVWRRGGDDGGGEDHHADGGGGGGGGAAWRARATTAGVSSSSSTAKGLQANIIEHE TPRITKWPNESRDLDDHQQNNEADEEADDELQPLVEQVRSMLSSMEDGAITASAYDTA WVALVPRLDGEGGTQFPAAVRWIVGSQLADGSWGDEALFSAYDRVINTLACVVALTRW SLHHDQCKQGLQFLNLNLWRLAEEEPDTMPIGFEIAFPSLVEAARGLGIDFPYDHPAL KGIYANRELKLKRIPKDMMHIVPTSILHSLEGMPGLDWQRLLKLQCSDGSFLFSPSAT AYALMQTGDKKCFAYIDRIIKKFDGGVPNVYPVDLFEHIWVVDRLERLGISRYFQREI EQNMDYVNRHWTEDGICWARNSNVKEVDDTAMAFRLLRLHGYNVSPSVFKNFEKDGEF FCFVGQSTQAVTGMYNLNRASQISFPGEDILQRARNFSYEFLREREAQGTLHDKWIIS KDLPGEVQYTLDFPWYASLPRVEARTYIGQYGGNDDVWIGKTLYRMPIVNNATYLELA KQDFNRCQALHQHELQGLQKWFIENGLEAFGMTPEDVLRAYFLAAACIFEPNRASERL AWARVSVLANTISRHFYSDMSSMKRMERFMWSSLYEENGNVLGLEGYAKDGILARTLC QLIDLLSQETPPVREGQKCIHNLIRCAWIEWMMQQINMKDGRYDKGRVMHPGSCTVHN KETCLLIAQIVEICAGRIEEAASMINNTEGSWFIQLASSICDSLHAKMLLSQDTKKNE TTINQIDKEIELGMQELAQYLLPRVDDRRINNKTKQTFLSIVKSCYYAANCSPHMLDQ HISEVIFEQVI</aaseq>

Gene Sequence

<dnaseqindica>9567..9794#8703..8951#8497..8623#7575..7817#7369..7467#7145..7260#6787..7013#6550..6662#6304..6424#5971..6185#5601..5784#4778..5087#4577..4671#339..494#124..244#gctctcgcctcccgcatcgcatctccatcatctccccatcctcctctctactcgtgtcttccattcctccatccctcgcgcgcatctccgacgagctctctactccctcctccgccgccgacgatgattcacctccactccccgccgacggcgcccgccgcattcggcggcgccggctcggcggactggcggcggcggcggcggtggtcatggtcgtcgtcgtcccgcgctccggtggctaaaggtggttgtgcatttcgatatatcttggccggtctatacgtttcttcagtcgatcggtcgatctctttaattacttacgtcgtctctctgtgcaggtggccatcttcgtccgtgcgtttggcggcgcggcggcgacgacggcggcggcgaggatcatcacgccgacggcggcggcggcggcggaggaggagcggcgtggagggcgcgggccaccaccgccggcgtgtcgagctccagcagtacagccaaaggtagtatacgggctcatgagagatctttcttccgccgcttttggtcttgtcgttttccgggtcgtcgacgagggtgagtcagtgagtgcactgcatgctttattcactgcactcctgcacctgcatagcctagtgagcagctgcctttggttgtgccaacgctttagtttcgttcagagatcactttaggtacatagatgatctacactgtgtggggggaggaagagactccttcaaagatcattgatgtggtcgctgaacatatgaacccgatcgaagaacagtaggatctatatatgtcggcgattacgttcctctgactttacgatagtcgaaggattctgatcaactgcgttgtgacgctgggttatgtgatgagggtaaaaagtagttttgtttttttggtttgtggactttgggttcatgcatagtcactgaacagaggaggacagagatagatttagtttggatggaggttctcgggagagaatatataaagtgggtagaattttttgagaagttactttgaggatataaagctagttgatttttcgttggcggatttactttttctatagaaaaagtattacctcttatagtaaggtaaattagtggctcgggacacacagcttgagattatgtcggtgcttaaaatgacgtgagtttttatctgtagcgattgattgacacttctgaattattaggcatgccatgaagtacaatcaagttcaccaccgcctcttacctatgtaaacagttaccttattgtgtaaaaaaaaaactggaaataattattttatttttgtgaaacattgtacacgcgggcactcatataaatgcacatacacacataccctactcatatgaccacctccaaacactgaactaatactccctccggttctatattaattgacgttttggacaaggttgaggctaaacttttataactttgaccatcaataactttaaaaatatttagtttaaagaaactagaaaaacatatatagatttgtctttcaaaacactataataaaagtaaacatgcatttatttattgtatatattataatagaaaaataaggtcaaaggtatatcttatagagcgtgttattgttcaaagcatcaattaaaatgaaaccggagggagtataatatatcttgaaatttatggagacagaagagaagcctcgctgtcagcatatcttgaaaataattatttgtaaacagttaccatcttttaaagtattatcgttggggtgcaataatttttttaataaaatttgcagaaaaaaaaaccttggtttgatttgtataacaacacaataatcttttgtgtgaaattcacttaaatctctactattataaaaattgaaccatggtttgatttgtataacaccacaacaatcttgcattgtgtgatattcacttaaaagaaccatggttttacttatatctctactattataaaaattgatgatgtttttaccagtattttggtacgtcattcgtgtatgaattgattttttaagtttgttcgtttttggaaatatagatctgtagttgagttgggttttaagtttgttcgtctttggacatacaaaaggagttgtataagaaatataaaacttgcatgctaacttgagatgatgggacttctaattgcagctcatgattttctagaaaaatatatatccaagcgaattttcaaagtaaatttcaccttaactaaaccatataacaataaaaagattaaaataggtttcacccgttgcaatgcacagacttttttctaggaatagtgataaatcaaattggacgaaaactgaacggcagtttgtctccgaaattcagtttttggaagttaatctccaatcacgtccataaacgcataaatgctgaagacaaattaatatgatatataaacagaaccaacaagataaaaaagaacaaatcaattgcctattctgcaactagttagtgttgtcgtcgctcttgcagtccattcagtgttgtgtggattcaaatatatcgtacgatgtcgcaatcaattggcatatatcgcatttatctttccagcagctgtcaaattaataaagctgttcactgcgagttagactgttcattattcgttgtttctaccagaatccagcatcattattcgttgttactatcacaactgttgatcggttgaattttacaaaaaaatctcaatgcaagattgtttgtatctatccaattttttttattgatgtacgggtttgttctgggggaccttgttctctttgtaaggcatgctttgctttagccaaatggccagcatatcaatttggttatcgaataaaattggcccaagattcgatcgattgggcttggactgggacttgacgttgtgtgtcgcgtagatttgccacatcagactagcactgcagatacaggattagatttaggggtcagtttcatgaatcctaagatttttcaactgagaataaatgttaagagattatagcaaaagaaatgcatggttgaatataatatttattcccatcgatcctagtcaataaaattatatatgttgcccttgatacttgggctagctctcgtgaatctccaatgcctttaggtttcatattttgaattgccctatagtttcacgtattatataggatgacttattagtttgtgaagaagtacaagtataatttagttgggctccacaatatttttttataatgcaaattaatgtactcccccatcctaaaatataaggcacaaccatcactaaaaaaaaccaagaaaaaaattaattacgtactcagttgaatcacctcgatgcatacaactaatgtgattgggggtttgatggtagaggagttaaaacaaagcgaaattagaggaagatgtgctagttaatgtatatatgccatgaactttttgtgccttatattttttagatggtggacaaggtgtatttgacattgggatacgctgatcaagtgaaaatacaaaaataggttgtctagttttcagtctccggaatgctgaaaggtgagaaaaacggcatctcatcatttaagagagacaaaagtttaatgtgatagtaacatctattttttgacgtgcttttagtaacatcttaataaaagttgtattcttcctcatctaatagtagtaaacggtagagcttttttggctagttgcttaaaaatgggaaatacttttggaacatcatcaaaactttctcaaactttaaatgctgtgagcctcgtgcgcagttacaacgatcaatagaggcagctcacagaagcttaattacagagaagtgaagcttaattaggatacatatcttaattaagatactcctacatccttcgagtatacagttgacattgaaacttactcccatctgttcccatattccctaataaatcaaaacggtttattagaaacaaaaattaatctataggtaaaacttttatatatttattcttagcgataatctacgttgaaaatatcttaaaatcaactttaaacttaaattttaaattttaaattttaaattttgacttttgccttggtttattaggccaaccgatgaggccattatatgttctctcaattgagaggttcaaactgcatataagcttcagttctatgtatactccaaaatccaaactgtgatttggatcctgccagagcaacaggccaactgcattggattctcttttctgcccactgagaatgtcgttgtctcgtatttttgttacagataatcccaaaatggtccagaagcttccgaaaaatagtatctcttagatttttagggcttgttcagtttgatttgcaatgtcaaattctggtaagacaacaaactaaatgagactttaccatcacacgaccttatcaatccttaccaacatttggtaattctaaaaacttctactcacaaaactataccaaaaacatgcggcacatacgtacgccatatacaagcgatactcaacactttgctcatgaaatcatgctgttttcttttttttcttttggcatttataaatggaaatgctgtaatccatgtgcagggctgcaagccaacatcatcgaacatgagaccccccggatcacgaaatggcccaatgaatcacgcgacctcgacgatcaccaacaaaacaacgaggtgaatcatccactaccttcttacagtaatcattcatggtcacattcttctcgtacgtaatctcattaagcacattttgattaattaattaatttgtttacgtcaggctgatgaggaggcagatgatgagctgcagccactggtcgagcaggtgaggtcgatgctgtcgtccatggaggacggcgcgatcaccgcgtcggcgtacgacacggcgtgggtggcgctggtgccgcggctggacggcgagggcggcacgcagttcccggccgccgtgcggtggatcgtcggcagccagctcgccgacgggtcgtggggcgacgaggcgctcttctccgcctacgaccgcgtcatcaacaccctcgcctgcgtcgtcgccctcaccagatggtccctccaccatgaccagtgcaagcaaggtatcatcagtaataattcatttatcacagattagtgaagttcagttaattacagtctttgtgttacagtttcagataggtttgttacagttaacttttcagatagattgttaatgcagtctgtgagatagacagtttgagataggtttgttacagttattttttcagatagattgttttctagataaaggatttatataaaacccggcttttacatcccaaagaaagtacacagccaaccttttcagatagattgttaatgcagtctgtgagatagactgttatttaataacaatccttttacagtttcagatagattgttggttactccctcggtctaatacatctagattcgtagtactagattgtgtttaatccggtagtgctaagttgctataatttaagacggagggagtaattaatttgaaggtgatgattagttagttccagattgcaagtgaggcaatgtgtgagatgatgttgatgttttctgaattttttgctcttgttcagggcttcagtttctgaatctgaacttgtggaggttagcagaggaggagccggatacgatgccgattgggtttgagattgcattcccttctcttgtggaggcagctaggggtttgggtattgatttcccatatgatcaccctgctctcaagggcatttatgcaaacagagaactcaagcttaagaggtataaatccatacgcgtcgtatgtataatatcgtgaccgctgtcgtgcatctgtagttggtgcagagatcggaagttactttcattatcttacaaaagatatgtatatagtggcaaacattggagagcttaactagttaaaacttgatgacgcttgtcttttgttgacaaaaactcacaatgtaggattccaaaggacatgatgcatatagtcccaacttcaattctgcatagccttgaagggatgcctgggctggattggcagaggcttctgaagctccaatgcagtgatggatccttcttgttctccccttcagctactgcttatgctctcatgcagaccggtgacaagaaatgcttcgcgtacatcgacaggatcattaagaaattcgacggaggcggtaaaagattcgtggcatttcactgaccaatgtttcggaaatctggtttgctacagtgcactaggtgccattttgtggcagctgatctcagatcatgtgatgttgaaaattttttcagttccgaacgtttacccggtcgatctttttgagcacatatgggttgtcgatcggttggagcgtcttgggatatcgcggtacttccaacgagagattgaacagaacatggactatgtcaacaggtttttcataatgttttgttttattagcgcaattattttctcaaactgatatgtgtggtgtcttctgtagttactttaggaaccttatgagcagagttttttaacctgtgtttctcactgtgtaggcactggactgaagatgggatttgctgggctaggaactccaatgtaaaagaagtggatgacaccgctatggctttccgtctactacgcctccatggatacaatgtatcaccaagtatggagctgtttttcttctttcaaattcagatgaaatcacatatcctgggaaaaactgtatcgtgttacgcttcaagatcatattaccttttctgaatcacaaattgctattgtaaattcaggtgtgttcaagaattttgagaaggatggggagttcttctgttttgtggggcaatcaactcaagcagtcactgggatgtataacctgaacagagcatctcagataagttttccaggagaagacattttgcagcgtgcaaggaatttctcatatgagttccttagagaaagagaagcccaggggacacttcatgataaatggatcatctccaaggacctaccaggagaggtataatctagttacttttgattgtagcataatttctttataaacttcatagtacattattttaaatttgttctctttgcaaatatttaccagttcctgagtactgatataacattgcactgaatcaataggtacaatacacactagattttccttggtatgcgagcttgccacgcgtcgaggcaagaacatacataggtcaatatggtggaaatgatgacgtctggattggaaagacactctacaggttaaagttttcacaactttgttccaacttcaaacattgttcaatatgattatcttcaaaataattgaagttaagatttgctgataattgttgggtgccttttgtcaggatgccaattgtgaataacgctacatatctcgagttggcgaaacaggatttcaaccgttgtcaagctctacatcagcatgagttgcagggtctacaaaagtaaatcaactccataaacttcatttctgtttcaccacacattttcctctgtgaacttatcttaaacaaagataaaatttgttttggcaccacaaatatatatttaggtggttcattgagaatggcctggaagcttttgggatgacacctgaagatgttttgagagcttattttttggctgccgcgtgcattttcgaaccaaaccgtgcctctgagcgacttgcatgggctagagtgtcagtgctggccaacactatttctaggcatttttacagcgatatgtcaagcatgaaaaggatggagcgtttcatgtggagcagcctctatgaagaaaatggcaatgttttggggtgagtactgcgaaactgaaattccttgaaattatgattttgcaccgtgcagcatgatgatgggtttttttatggatagttactactaattgcttctgatgcttgtcctctctatgagaaaaatgggaagctgaattgaatggtaaatggtttctattttgacaatcaaaagaatgaatatattaggtttttttatttgaagggagcacaaattgtccttcagctcttaaaataagaggaaaactaatgtttttcacctggaaaacagtaaaggaaggtaagtacgtaaaagcattaaaatggaatgttgaaagttacaaccatttaagagggactagtttttacaacatttggtaaatatataggtttaaaaaaaacatttggtaaatataaattagatcatgaactcatttcttgagaattatttggaagaacaatttgtgatcataggattattacaaaatgacagaagaatattccaaacttggtatttgttctatccagcctaatataatgcttatattttttttatataataaaagagaagaatgcttgccttggagtacaccacatattacaatgtagcgatgtatctagaaaattcttatcataatgccataaaatgtaaaaaaatctactaagatttttctcagtatttaacttaaaattgttcgttcaggctagaaggatatgcaaaagatggaatccttgcgaggacactttgtcaacttatagatttgttgtctcaagagacaccgccagttcgagaaggtcaaaagtgtattcataatctcataagatgtgctgtaagtaaaacataactataaacttcttattacagtgttgtagccagaaaaatgctaagatctttgtttgcatttctagtggattgaatggatgatgcaacaaatcaatatgaaggatggcagatatgacaaaggcagagttatgcatccagggtcatgcactgttcataataaagaaacatgtttacttattgctcaaattgttgaaatttgtgctggacgaattgaggaggcagcatctatgataaataacaccgaaggttcttggtttattcaacttgcttcctctatttgcgattctcttcatgccaagatgttactttcacaggtaactcttatacattacatagtctgttgactagagttttattctgatactagtgtaattttgcagtagttatataaattaaagaatggtgtaggttgttttttgtttgatcaaattatgtgtatagtggttagaaagtttattgtaaaactttatatgttagtatagtttcatcgataaaaacttctcaccgacttgacaagctgtattcactgaattgggcacgttataatcacttggatgatgaaaaactaattataaaaatgaaatcagcatttgtaataaatagttttatatattctccagtatagatgttgtaacatgataacaagtcggtactttggtcctgaacaatgcactttcagtataaatatatgaaattcttacaatccttgggggttattgcaatgtagatgtacctcctaggtaccactacgaataggtgtcaagaggtaaaaaataagtaacagtacaaaagataattctaactctcaaggcatctccaaggactgaagtttttttttttagcagttacatcagagctatggttctatttactatatttgcttcaatgtcaatgtattcagctactcaactgttgatacaattttgtaggataccaagaaaaatgagacaacaataaatcaaattgacaaggaaattgagttgggtatgcaagaacttgctcaatatcttcttccaagagttgatgatagaagaattaacaacaaaaccaagcagaccttcttgagcattgtgaaaagctgttactatgctgccaattgctcaccacatatgcttgaccaacacatttctgaagtgatttttgagcaagttatttgaaataaagtttaggcaaatagagcatttgtcagattgaatcgcatgtaaatatttctgtgcagaaaaaatatgtaaagaatgagagagaacaagcatataaacaatagtattattgttgaaagctaacaatttttacatcaagtgaatgatgtatctctgtatggttctacatgtgggacacattttctataaattatttattttgggtttgttct</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0278700, RefSeq:Os02g0278700