Os06g0704300

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Revision as of 09:33, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os06g0704300| Description = Zinc finger, CCCH-type domain containing protein| Version = NM_001065042.1 GI:115469815 GeneID:4341994| Length = 362...")
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Gene Name

Os06g0704300

Description

Zinc finger, CCCH-type domain containing protein

Version

NM_001065042.1 GI:115469815 GeneID:4341994

Length

3620 bp

Definition

Oryza sativa Japonica Group Os06g0704300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:30615882..30619501

Sequence Coding Region

30616100..30616143,30616261..30616495,30616598..30616686,30616773..30616871,30616968..30617061
,30617200..30617417,30617764..30617870,30618201..30618375,30618499..30618562
,30618931..30618978

Expression

GEO Profiles:Os06g0704300

Genome Context

<gbrowseImage1> name=NC_008399:30615882..30619501 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:30615882..30619501 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgagtcggcggcaggagatttgccgcaacttccagcgcggaagttgcaagtacggagcgcagtgcaggtatttgcatgcctcccctcaccagcaacagcagcagcagcaggcgaagcccaacccgtttggatttggcaccggaagcaggcagcagcagcagccgtcatttggctcacagttccagcagcagcaacagcagcagcagaagcccaatccttttggttttggggtacaaggtgccaatgcccagtcacgtaatgctcctggtcctgcgaagccttttcaaaataagtgggtaagggacccctcggccccgacgaagcaaacagaggcggtgcagccaccgcaggcgcaggctgcccacacctcctgtgaagaccctcagtcatgcagacaacaaatttctgaggattttaagaacgaggctcctatttggaagcttacttgttatgctcatctcagaaatggcccttgcaatattaagggagacattagcttcgaggaactaagagctaaagcctatgaggaaggaaagcaagggcattctctgcaatcaatagttgagggagaaagaaatctacaaaacgcaaagttaatggagtttactaatctgctcaatagtgcacgtccatcacaaactccaagctttcctactatgagttccttccctgaagtgaaaaacaactcatcattcggggcttctcaaaccaatggaccacctgtgttcagtagtttcagtcaaattggagcagcaactaatattggacctgggccaggaaccaccgcaccaggaatgccagccagtagtccttttggtcatccaagctctgcaccacttgctgcccctacttttggcagttctcaaatgaagtttggagtttcgagcgtatttggaaaccagggttcaggtcaaccatttgggagctttcaagccccacgttttcccagttcgaagtctcctgcttcctctgtccagcacagagacattgataggcaatcacaagagttgcttaatgggatggtaactcctcctagtgtgatgtttgaggaatctgttgggaacaacaaaaatgaaaatcaggatgatagcatctggttgaaggaaaaatgggcaattggggagataccgctggatgaaccacctcagaggcacgttagccatgtgttttaa</cdnaseq>

Protein Sequence

<aaseq>MSRRQEICRNFQRGSCKYGAQCRYLHASPHQQQQQQQAKPNPFG FGTGSRQQQQPSFGSQFQQQQQQQQKPNPFGFGVQGANAQSRNAPGPAKPFQNKWVRD PSAPTKQTEAVQPPQAQAAHTSCEDPQSCRQQISEDFKNEAPIWKLTCYAHLRNGPCN IKGDISFEELRAKAYEEGKQGHSLQSIVEGERNLQNAKLMEFTNLLNSARPSQTPSFP TMSSFPEVKNNSSFGASQTNGPPVFSSFSQIGAATNIGPGPGTTAPGMPASSPFGHPS SAPLAAPTFGSSQMKFGVSSVFGNQGSGQPFGSFQAPRFPSSKSPASSVQHRDIDRQS QELLNGMVTPPSVMFEESVGNNKNENQDDSIWLKEKWAIGEIPLDEPPQRHVSHVF</aaseq>

Gene Sequence

<dnaseqindica>219..262#380..614#717..805#892..990#1087..1180#1319..1536#1883..1989#2320..2494#2618..2681#3050..3097#actactccggccggcggccgcgtctcgagttctcggcggaggcggcaagccggcgagggcaacccacccaccgacgtcgtgcggccgcgcttgctgcgtcgcgtgcccacgccaatcccgtggcggcggaaggaggaggagcaagcgcttgggaggagctaaaccctagaggcggagctctagaatcgaatccccccccttccttccgctttgcggcgatgagtcggcggcaggagatttgccgcaacttccagcgcggaaggtaccggatcccccccctctctcatctctctcagtgagaactacgccatcgattgattacccagccattgattcgagtttttgatttgcaatgcttgtttctgaatgatgcgtgcagttgcaagtacggagcgcagtgcaggtatttgcatgcctcccctcaccagcaacagcagcagcagcaggcgaagcccaacccgtttggatttggcaccggaagcaggcagcagcagcagccgtcatttggctcacagttccagcagcagcaacagcagcagcagaagcccaatccttttggttttggggtacaaggtgccaatgcccagtcacgtaatgctcctggtcctgcgaaggtttgtcagcgctaatcagaacaaaggaaattcttcaattgcagtgtttttccatgtataggaatgtgttgtgtatgactaataaagaaattgttgaatcagccttttcaaaataagtgggtaagggacccctcggccccgacgaagcaaacagaggcggtgcagccaccgcaggcgcaggctgcccacacgtgagtccatatgctatatgttttgcttttgatctcacctgattaatcttgggtatgggcgaatcaccgacatgtttgttttccagctcctgtgaagaccctcagtcatgcagacaacaaatttctgaggattttaagaacgaggctcctatttggaagcttacttgttatgctcatctcagaaagtaaataattcatgtcctatgcttcaagccttcaaaagttgctctaggccatgccaaatgtttgtgcacttaataatgcacttttgtttgcatcagtggcccttgcaatattaagggagacattagcttcgaggaactaagagctaaagcctatgaggaaggaaagcaagggcattctctgcaatcaatagtaagttttccattttccagcactcccaattcattgatagttttatctgtggattttagcagaagtaatacctgctttcattagctttgcttacatggtctgatctatgtaaatttgaattgatgtgatctctttcaggttgagggagaaagaaatctacaaaacgcaaagttaatggagtttactaatctgctcaatagtgcacgtccatcacaaactccaagctttcctactatgagttccttccctgaagtgaaaaacaactcatcattcggggcttctcaaaccaatggaccacctgtgttcagtagtttcagtcaaattggagcagcaactaatattggacctgggccagggtactactctactagttcttttgtaaaatatgcagtgattgtgttactaatctactccctccgtttcacaatgtaagactgtctagcattgcccacatacatatagatgttaatgaatctaaacacatgcatatgtctagattcattaacatttaaatgaatgtgggcaatgctagaaagtcttacattgtgaaacggaggaagtattgaagaaagacaatttaatcagaaagcagcgcttagaaaagttctttaaacacaattgcaaagctcacatatagttgatcaattttctaatgctgttcatttggttctgatgtgtgttaaatgactgcctctcatgcagaaccaccgcaccaggaatgccagccagtagtccttttggtcatccaagctctgcaccacttgctgcccctacttttggcagttctcaaatgaagtttggagtttcgagtatgttgctgaaagtttcatttactagatatttgtactgttacatggaagaaagatggcatataagctttcacctagtgaaattataaatattattctattgaggggtagttggaaagaatatgcttgcgcctaattcaaaaaagaagttttcaaaagttctgcttgatagtaggtattgtggactaagattttcaaaatatctattctaatacatctgactattttctctttcatctatgttcacaggcttttgttccatgattccatcccttctgggaattaataactattgtgttgggttgctatttaacttttagaattttgcaggcgtatttggaaaccagggttcaggtcaaccatttgggagctttcaagccccacgttttcccagttcgaagtctcctgcttcctctgtccagcacagagacattgataggcaatcacaagagttgcttaatgggatggtaactcctcctagtgtgatgtttgaggaatctgttgggtaagttctgtgataattataactgtatacttgataagaatgtatttctgctgatgggaatacatgttgctgtgttaaattagcttcgcatcatgtttaatcttctttgtttatattccacaggaacaacaaaaatgaaaatcaggatgatagcatctggttgaaggaaaaatgggcaattggggaggtgtgggatactttcctcttggtcattttcgaagttctgtttgctagaaatgtttgctcatttacaacttttgttcctgctatggtacatttgtagttagttctctatctccttagtccttaatattgtacgcatgttcatttagtagtgttgacatcatgcacagactgtggtctagattatgaatttgtggcatgcgcaagattatacttagaaagatctctacatatcgtacatgtttgcttagtgtgcatcttcccgtcttgcaaattatcaagagtttgaacaagcattggctttactaacttgtgctttctttatatttggcaagtttctacaatttaaattcatacgaaacttcctttcagataccgctggatgaaccacctcagaggcacgttagccatgtgttttaagaactcaaaggtgtttttttttgtgttgttgaggcatgagaccatgaactactcagctatgatctgacttccttgtagttgggttgccaccatatgtcgtacttttcttgcccgaggtatatatgctcaccttatacccttttcccttcagtttgtatgccatttatcagtgggccttgattctggctgctatgttgcagcttcatgacgatacaaaggaattatacaacaaacaagagaatttgcaagagtgaacagtgaaggaaggctgatgaaccaatgcattgtttggtaccacttatttattcctggaacatgaatgtgggcaactagagctaacaaccagctaactgcagtcttgcctgtcgagttagtatgtttttctctcttttttttaatctgtaattgtttattccaatagtatgtttttctttttttttaatctgtaattgtttattccaaaacttgttaggaagttattggaataagaaacagtattgcaatattgagtgattggccgggt</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0704300, RefSeq:Os06g0704300