Os09g0520600

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Revision as of 07:32, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os09g0520600| Description = Bile acid:sodium symporter family protein| Version = NM_001070236.1 GI:115480214 GeneID:4347609| Length = 3320 bp| ...")
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Gene Name

Os09g0520600

Description

Bile acid:sodium symporter family protein

Version

NM_001070236.1 GI:115480214 GeneID:4347609

Length

3320 bp

Definition

Oryza sativa Japonica Group Os09g0520600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:21079828..21083147

Sequence Coding Region

21080229..21080294,21080660..21080742,21080825..21081078,21081238..21081490,21081582..21081775
,21082257..21082387,21082513..21082616,21082947..21083067

Expression

GEO Profiles:Os09g0520600

Genome Context

<gbrowseImage1> name=NC_008402:21079828..21083147 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:21079828..21083147 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcccccaacgccgccgtcctggtgcggccccacatcgccggcgtccaccatctgcccaccggccggcgactgccccgtctggctcctccccaggcggtctcgccgccgttttcacggcagaagggatctgtagtggctgcgagtggacgtgtctgggcgagtgcgagtggttcgtttgagaaagatcgcattggagatgacgatgtgttagcttcgccgcagatagtggaggagagcaaagtcgatttgctgaagattctgaagagtgccaacaccattattccccacgtagtgctggggagcacaattcttgctctggtgtacccaccttcttttacatggttcacaactagatattatgcaccagcattgggattcttgatgtttgcagtgggtgtaaactcaagtgttaaggatttcattgaggctatacaaagaccagatgctatagctgctggctatgttggacaatttattatcaagcctttcttaggattcctttttggcactcttgcagttacaattttcaatcttcctactgctttaggtgctggtatcatgttggtttcatgtgtgagtggagcacaactatcaaactatgcaacgtttctgacagatccacatatggcccccctcagcattgttatgacatcattgtcaacagctactgccgtttttgtcaccccaactttatcctactttcttattggcaagaaattaccggtggatgtgaaagggatgatgtccagtattgttcaaatagtggttgctccaattgctgccggattgcttctgaatagatatcttccgcggctctgttcagctattcagccatttctccctccactatcggtatttgtgactgctttatgtgttggttcaccattggccataaatattaaggctgttttgtccccatttggactagccacagtgcttctcctttttgcattccatacatcatcttttatagctggatatcatcttgctggtacttggtttcgcgagtcagcagatgtaaaggcactacaaagaacagtatcttttgagacaggaatgcaaagtagccttcttgctcttgctttagcaaacaggttcttcccagacccactagtgggagtgcccccggctatatcagttgtgctgatgtccctaatggggtttgctcttgttatggtgtggtccaagagaacaaaagaatag</cdnaseq>

Protein Sequence

<aaseq>MAPNAAVLVRPHIAGVHHLPTGRRLPRLAPPQAVSPPFSRQKGS VVAASGRVWASASGSFEKDRIGDDDVLASPQIVEESKVDLLKILKSANTIIPHVVLGS TILALVYPPSFTWFTTRYYAPALGFLMFAVGVNSSVKDFIEAIQRPDAIAAGYVGQFI IKPFLGFLFGTLAVTIFNLPTALGAGIMLVSCVSGAQLSNYATFLTDPHMAPLSIVMT SLSTATAVFVTPTLSYFLIGKKLPVDVKGMMSSIVQIVVAPIAAGLLLNRYLPRLCSA IQPFLPPLSVFVTALCVGSPLAINIKAVLSPFGLATVLLLFAFHTSSFIAGYHLAGTW FRESADVKALQRTVSFETGMQSSLLALALANRFFPDPLVGVPPAISVVLMSLMGFALV MVWSKRTKE</aaseq>

Gene Sequence

<dnaseqindica>2854..2919#2406..2488#2070..2323#1658..1910#1373..1566#761..891#532..635#81..201#gtctctttcgctgcgttgcgtcatcagctctgaaactctgaaaccaaaacccacccaccctcgcggtcgccggcgctcgaatggcccccaacgccgccgtcctggtgcggccccacatcgccggcgtccaccatctgcccaccggccggcgactgccccgtctggctcctccccaggcggtctcgccgccgttttcacggcgtaggtgctctgcttgatccgatctgaaatatcccctttttatagctgtgtgggttggcgattaaggaggattggagttggaggtcgttggggggggggggggggggctaatagtcttaagaaactcttgttcatatctttgattcacctttggttggtggcataaaaaatgtaaagttttgaatttatttcttttccttttataaattcggtatgatgtctgtctttccatcaaaagcttactgctttggttagaagtttaatgttttgtgctcaaaagatagcacaatcgtagtggttctcatgttctttattaattgaagcaagcagagaagggatctgtagtggctgcgagtggacgtgtctgggcgagtgcgagtggttcgtttgagaaagatcgcattggagatgacgatgtgttagcttcgccgcaggtgccatcctgatgctgttttttcaatgctctagttagtgagcttttgtatcagtttactactatttgctactatttgggtattcacttggtgcttgattaatggcttggagtaaccttttacagatagtggaggagagcaaagtcgatttgctgaagattctgaagagtgccaacaccattattccccacgtagtgctggggagcacaattcttgctctggtgtacccaccttcttttacatggttcacaactaggtcagtcttgcttgtgtgttttaagttgaacttaattcagttcttgacctgaataacaggtgtttgtgtgttactttctcatcagctagttgcgctgatatttctgggctgtactttcagtgaaatgaagctctattcactaatcgctgactagttacatgatgaccagttaggtagattcagatatcgaagtatatgtgtagtactactgaattatatccagttgatctttgggtgacaaaaaacacccttgaaacatagtatgcttaattgctgatcattcatgtatgttgataaaggccattgttgatttatacgagagtgagtataacagagaagggatgtagctgtgattgctgtatcatgtcatttctgctactgatactttatatatgcactcgcaatgctattcttatttgattgttaatttgttcacatttgactttattattacattctcactgtgtcattgactgggcagatattatgcaccagcattgggattcttgatgtttgcagtgggtgtaaactcaagtgttaaggatttcattgaggctatacaaagaccagatgctatagctgctggctatgttggacaatttattatcaagcctttcttaggattcctttttggcactcttgcagttacaattttcaatcttcctactgctttaggtaggggagttgaatttatcctagtatttattatgcttacatgagaaatattgatggttatatagagaactctgaattggtcttttttcaggtgctggtatcatgttggtttcatgtgtgagtggagcacaactatcaaactatgcaacgtttctgacagatccacatatggcccccctcagcattgttatgacatcattgtcaacagctactgccgtttttgtcaccccaactttatcctactttcttattggcaagaaattaccggtggatgtgaaagggatgatgtccagtattgttcaaatagtggttgctccaattgctgccggattgcttctgaataggtatttattttggtctgaaagtatatgtcaccctgttctacatcttacagttacttatacgcatactatatgtttttgatatttgcaaccttattagtatgcattcatttaagagtatttattaatgtgtttaacttcttgtttcttgatgatatgaagatatcttccgcggctctgttcagctattcagccatttctccctccactatcggtatttgtgactgctttatgtgttggttcaccattggccataaatattaaggctgttttgtccccatttggactagccacagtgcttctcctttttgcattccatacatcatcttttatagctggatatcatcttgctggtacttggtttcgcgagtcagcagatgtaaaggcactacaaagaacagtatcttttgagacaggtaatatacagtttcttgttggattaggatatgctatttgcaatttcttctgttgtctcactatcacatatatgtcatacaggaatgcaaagtagccttcttgctcttgctttagcaaacaggttcttcccagacccactagtgggagtgcccccggctatatcagtatgtctacttttcctcacctgttgcttatttgcttttatctcaggagtcaaccattaattcttagtcttgtactggtttatcttgtctgatgcgacctacgtgatttccatctagggaacagatatgagttttatgcgacctacgtgatttccatctagggaacagatatgagtttttatatatagttgtcccaaaatctcagaactgtttcatgcaaaagatgtgtttcgcaaatgtgttttgacacaattaatatttcagatttcagttcttatgtatctagaaatcgatttgagcacaacttcaaatcctgtatcttacacctgaaaaattgctaaactgatttctacttttctctgcaggttgtgctgatgtccctaatggggtttgctcttgttatggtgtggtccaagagaacaaaagaatagctcatattgaactattaaagtcagtcagctacagagcagtgttcagtattaacagtgatgtacgctcttctaaaatcaccatgaagaacagccaatcacaaaattggaggtgaggacggcagatgtttgatggctaagatacaaactcttccagtgccaataaaccatgtacaccattgctctgaatccttctcgctttctttcgccgtggtactcttttcttgttcctgttctgaacttaaccaagacctcaagttgtccaagtgcagctaggattataaagttgtccaagtgcagctaggattataagcatttatgtgaaaggatctctgtaacatttattcagtataaggagaaaaagtggaggaagaagtaggaaacaacaggtctttgaatttcct</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0520600, RefSeq:Os09g0520600