Os06g0705300

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Revision as of 09:34, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os06g0705300| Description = Conserved hypothetical protein 1589, plant family protein| Version = NM_001065050.2 GI:297606468 GeneID:4342002| Len...")
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Gene Name

Os06g0705300

Description

Conserved hypothetical protein 1589, plant family protein

Version

NM_001065050.2 GI:297606468 GeneID:4342002

Length

6144 bp

Definition

Oryza sativa Japonica Group Os06g0705300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:30675175..30681318

Sequence Coding Region

30675465..30675469,30675630..30675713,30675816..30676283,30676638..30676820,30677265..30677370
,30677823..30677846

Expression

GEO Profiles:Os06g0705300

Genome Context

<gbrowseImage1> name=NC_008399:30675175..30681318 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:30675175..30681318 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtcaggagcggacgtcgacaaggtccagaatcttatccattgctgccttcagctatacatggacaagaaagaagttgttgatgccctttcccgtgaggcaaaaatagaacctagtgttacacagcatgtttggcagaaactcgaggagaataatcgtgagtttttcaaagcatactatttgaggttgatgcttaagaaccaaataacagccttcaacaaacttcttgaggaccagttaaggattataaataaagaatatcatccagggccttcttctatgcctcttcccaatggttccaactcaaacctattgaagcaaaatccatgctttttatcagagtctactccgatgcctgcaatgccagatgatgtaatgtgcaatggaaattccagtggcatagtagatcgcacacaatccagcgatcaattaatttatgctggtaaagacattcagggccttcatagtagcatggatgcttccaatttgcttccagtgcagaatgctaattctgtgctgtttggtgtggaaaatgggacgactattaagacggaatcaggctattcgagcaatggtaattttggtttctgcgggaatgctttcctggaatcatgccagtcaataggtgatgcatctggtggatcctttagcagttcagagttgaatgggcaacctctggatgattcaattttggatattgaatcatcatcgtttggcttcttgagtcagcttccccgaaattttttttcagacctaccagaggatttcagtcaaagcacagaaatattagacaattatggcaagtcaccgttcctcccttctgagcaaaataacttttcagattctacaggtggtgaacacacaggttga</cdnaseq>

Protein Sequence

<aaseq>MSGADVDKVQNLIHCCLQLYMDKKEVVDALSREAKIEPSVTQHV WQKLEENNREFFKAYYLRLMLKNQITAFNKLLEDQLRIINKEYHPGPSSMPLPNGSNS NLLKQNPCFLSESTPMPAMPDDVMCNGNSSGIVDRTQSSDQLIYAGKDIQGLHSSMDA SNLLPVQNANSVLFGVENGTTIKTESGYSSNGNFGFCGNAFLESCQSIGDASGGSFSS SELNGQPLDDSILDIESSSFGFLSQLPRNFFSDLPEDFSQSTEILDNYGKSPFLPSEQ NNFSDSTGGEHTG</aaseq>

Gene Sequence

<dnaseqindica>5850..5854#5606..5689#5036..5503#4499..4681#3949..4054#3473..3496#gccgcccagccgccgtgatgctcctgtgctcgtacgcccaatcccgtcgtccccggctcccttctcactgaggtaaaaatccaatcttgccggctcacccccctccgcctaaaaggaggagcagttcgttcttctgtttcccaagttggattgcgcttttcttttgttttattttttcccctgatgtcttctgtatgtgggatactcaggatgatgcagagatgccaaacgaaagagatccgttccgacgacggttggtgatggcggcggcagtgatgaagccaccgagttgataaatgatgcggttcttcgtaaggaatactactgctgtttctcttcactgggggaactcgctgttagctgatggaaactggaagtatggaacagtgtcacctgctccggaaattcttctgaactggccttctccccttcgcattcctctttgtttgacccatcatagtctgtggaaagatcgtctgtgaccatggctgtccgagacgtcgcgtccttgaaccgtatgatcacaggcttcatcagggacggccttgctgatcgggcccgtgctgtctacaggtggatggtcgcttcaggcatcagggagacccctcataccttctctacaatcctgggagtgtgcagcacttacgaggcactgcaactccatggccgggtgctggccctaggcttgtgttgcaatccatttgttggatctgcgcttgttaatcactatatgcatgtcgaatcaccacatgctgccctctcattgttccgggaactgccgctgcagaacacagccatgtgcaatgtggtactgcgtggcttgggcaacctgaagctgactgaagaacttatctgctgctttcttgatatgagacggcagtatttggagctgaatggcttatcctattgttatgccatgaaagggtgctatcaaaatggtgaatggctagaacaaggcaggcaactccatggagttgttctcaaggctgggtggattccatccaacattttcctgtcaaattctcttgtagatctttactctgcaattggagattcagtggacacagtgaaggcactgaatgatatcctgtctgaggatgtcatctcatggaactccattttatcaatgtacgctgacagaggacatatgaaggaagcagtttattacttgaaacagatgctttggcatggcaagatgccttcagttcgctcatttgtttcgctccttgctttgtctggcaaaacgggggactggcaactcggagttcagatacatggcattgttcataagcttggattcagttgtagtagtgtgcatgttcagactacgctcattgatatgtatgggaagtgttgctgttttgatcattcattagcaatattcaatgaaattccaagtattgcactggagtgctgcaattcgctgatcacatcatcgcttggctgcaacatgtttgatgctgctttagagatattgcattgtatgattgtagagggagtgacacctgatgatgtgactttctctgcaactatgaaagccatatctttgtcagcttcaccaagtttaaccagttgtcaaatgctacattcttgtcttgttaaattgggatttgaaatggacatggctgtgtgctcctccttgatcactgcttatgcctgcgctggtcaactgagcagttcacacttgatatttgaaggattgttggatccaaatgtgatatgcttcactgctataatatctgcctgtgctcgatatggagatggagcacgagcaatggagctattcgatcagatggtttctagtggcctgaagcctgacaatgttacctttctgtgtgcaattgcaggatgtgatcaggcaggaatgtttgaagaaggacggctggtgattgaactcatgagagctagccgtgagctggatcctgatgaaagacattttgcttgtatggtcaaccttctcagtcgagatggttttgtgaaggaagcaatggaaatgatggaacagtccccattgagacactacaccaaggcatggagctcacttcttcagagctgcaaagcacatggtgaaaatgtgctgggaaagagagctgccaacatgctgatagatgtagggagaaaagatccagccaccactttgcaggtatcaaattttttcaatgatattggggacagagaaactgctttaaggattaaagagatgacaaatgtgaaggaagtgaagaagagcggtcacagcttaattgaggtcagtcaccgagcttagcacttggaattaaaaccatatcggcaccatggattatctactagtttgagataaacatttgcaccgcataagaaggttctcttgccatccaaaaaaggcagcgaggatcagatcctcacaccacattgcatcgcttgttactctgtttttgtggtaaaagatgttcgtggcaaggtgccttttctatttggttgggcctggaatcaatggttaaatcgtgtaactgccattgcacgttatgagcacatctgccaagtgaacctctgactgttctgacaggtctgaaattattttctatgcttattaatacaatccaaacaggcttttatcagatttccgttggtattgattcagctgtctccctgatcattgcaggagactattttgctgcatatggtggtggaggctgactactgttttgagcacaagcactaagtctaaaaccgcggagtgcaggccagtggatgaagtgagcactggcgttggatggggttgtgtcaaatggtgacaggatggccggttagcaacctagctggaaagtgcctccacttctcactttctttcccttttcttgtgcccccttgcaatttcttatgcatcagtcagtaagttcatatgtgtatatttgtatatctttttctcctattgctaattgcatccaatcattgagcacactttcagttaaggcactttttatggcctaattggactgaatcgactgcaatttattaattctgtgcagaaagcttctccatcacttgcaggcagtataaaaaaagggttcccatagaactggtgcagaagtgtttctggtgccccagattccagaacggacagagccgtggattaggaatcctctcctcttccccactcccacttcagcccaccaccacttccacttccccttccccttccttttccctactcttctcccttgcatctcgagctggtggctggctactccgctcctctccccgctcctccccttcgtgatctcctcactgccggagttttctctcttctccgcctcgctgcaagggagagctgaaattatctcgcggggaagaccagggcaggtatgatccgtgaactgggcctgaatcttgtgttgttgttggctgatgctagcactgcttcttgcggatttttcaggggaaaggttcaggaggggattagggcaggaggagtggagaaagcgccggcgacatgtcaggagcggacgtcgacaaggtctgtcgttaggacatacagctgatcgtcagtagtagttcagtgccttgtttggttcatgtagaacgcttgttgattcttgttgggttttgctactgaattcgttggttcttggcctcttcgcagaggatacagtgccactcaagtttgatttgcgtgcttatagtgacagtgccattctagggtttgtgatcacctgccaattagttagtagggtagggataatctcggattgtgatacctagtagggttctaattacttgttcagcctgcaatgcatgcaagcacacaaggtccgtgttatggatattctttgcattcgtttatgctgaatcatgcttagaaactacctttggataacacacagtttattttatgtgtagcatgcttgaacaattaatacatattcaattgagctgatggataactcttgttgctaacttttgttccaggtccagaatcttatccattgctgccttcagctatacatggacaagaaagaagttgttgatgccctttcccgtgaggcaaaaatagaacctagtgttacacagcatggtagtgctcttaccttgtatgccaaaagtttcatttagcttacttgcaagttggtcttaggtttcagaactggctagtaacagcgcaggtcatgcatagttggatgggttgctatcttgttacaattatgattgtggaattgtgacatatgctggttcactcaacacaaatatggtttaggtaaaaaaccatgtcatcaattttgcaataaacactgttatatgctgcctaaatattcttttttccgtcccctctacgaacctactttatgtttcaggagggctctgtcaaacagaaagggaacataactaggaaactgtttatgtttatcttgatttgcgcccttttattattgttagatcatttttgttgttaacatctggttgattttctttttgtaggctgttgttaacatctggttgattttctttttgctctttccagtttggcagaaactcgaggagaataatcgtgagtttttcaaagcatactatttgaggttgatgcttaagaaccaaataacagccttcaacaaacttcttgaggaccagttaaggattataaataaagaatatcatccagggccttcttctatgcctcttcccaatggttccaactcaaacctatgtaaggcatttttttcagacttaagcttctagcaatgactgatatgagcataactggagtagtaatgcaataccccattgtttaagtgagtgtataatggtgaacaaataattagttctttgggagcctgaagaatttaatgtttctgaaaatgatcttttccaagtgtaagctcaggaagtttgtgtttattaggtgagcacaacacggttgctcaagagaaagatatttgcttgcctttactttccattctttattttctttgtttgcagggctaggcatttagttgagtacagactgtcctcttacggggttgtttcattttaatatggccttctgttttccttgtttcagtgaagcaaaatccatgctttttatcagagtctactccgatgcctgcaatgccagatgatgtaatgtgcaatggaaattccagtggcatagtagatcgcacacaatccagcgatcaattaatttatgctggtaaagacattcagggccttcatagtagcatggatgcttccaatttgcttccagtgcagaatgctaattctgtgctgtttggtgtggaaaatgggacgactattaagacggaatcaggctattcgagcaatggtaattttggtttctgcgggaatgctttcctggaatcatgccagtcaataggtgatgcatctggtggatcctttagcagttcagagttgaatgggcaacctctggatgattcaattttggatattgaatcatcatcgtttggcttcttgagtcagcttccccgaaattttttttcagacctaccagaggatttcagtcaaagcacaggtacattctaatgacaatattgatttattttgctttctgatttgagtaccatttttcattcctcatacttttgtttgctctccacatttacttatcttgcagaaatattagacaattatggcaagtcaccgttcctcccttctgagcaaaataacttttcagattctacaggtggtgaacacacaggtaatcattcttcccaaccctctttttcctgttcacagttagccataacaatagtgcataccaccaccttatgcttgtgtggtagtactttatcaatcaaagaatatgatgttttcttgtatggctgatctttgcaatggcattcaccttgtgtttgcaggttgagcagccatcggtcatctgtacatacatgtttgggcagggaaatttattagccttttcttcgttagttccagtattctaattcgacaagtttggatgagttgtatctccagagcatgtaaggggatctgtcttcccatatgcttgctgatggtattgtaggtgtgccttacaatgatgcggttttgtaagataaccattagtagcggtggtgctgaatccgcagtctatgggttacatattcttctctggcatgtactaaaattgatatttttattaagtcaagtgaatgc</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0705300, RefSeq:Os06g0705300