Os06g0705500

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Revision as of 09:34, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os06g0705500| Description = Ataxin-2, C-terminal domain containing protein| Version = NM_001065052.1 GI:115469835 GeneID:4342004| Length = 3304 ...")
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Gene Name

Os06g0705500

Description

Ataxin-2, C-terminal domain containing protein

Version

NM_001065052.1 GI:115469835 GeneID:4342004

Length

3304 bp

Definition

Oryza sativa Japonica Group Os06g0705500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:30685541..30688844

Sequence Coding Region

30685861..30685908,30686048..30686185,30686433..30686707,30686784..30686877

Expression

GEO Profiles:Os06g0705500

Genome Context

<gbrowseImage1> name=NC_008399:30685541..30688844 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:30685541..30688844 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggaaggccggtcccagttgaatccagatgccagtcctttcataccttcctcactaagtcttttcacatacaatgattctaagagacaagcagagtcatcctcgatgaacgatccttctgctagagcttgccgtccttccatgtgcgaggaaaatgatatggatccacttgctttgaccaaatctgtccttttaatgttcccgaatatctctgaggaattcattgatgagttactccaggcaaatgaatttgacatatgtctcacggttgatatgcttcatgagctgaattcacaaaatatgcttcatggtgatgccataatgggcttcccaacattcccagatgtgaagaaatttcacggcaacctaggcctacctgatggtgatttgtctgaaagcaacagcagtcttgatcaatctcttcagaagggtatgtcactgacgacttctggtgcgaaatctgcctcggcaatgattccagataacatttctcttcatgataaactgggtgtacagaaagacgataagccagcaattgcttctaccacaaattaa</cdnaseq>

Protein Sequence

<aaseq>MEGRSQLNPDASPFIPSSLSLFTYNDSKRQAESSSMNDPSARAC RPSMCEENDMDPLALTKSVLLMFPNISEEFIDELLQANEFDICLTVDMLHELNSQNML HGDAIMGFPTFPDVKKFHGNLGLPDGDLSESNSSLDQSLQKGMSLTTSGAKSASAMIP DNISLHDKLGVQKDDKPAIASTTN</aaseq>

Gene Sequence

<dnaseqindica>2937..2984#2660..2797#2138..2412#1968..2061#actctatcccatctcttccccgttcccacttcgccggagcaccaccgcggccacggcgcgcgacgcgagcacccaccccgccgccgccggcggctgaccaacttcctcctcgccgcctcccaatcatctcgaggtaactgaatcccccgacctgtctctctctgttatctgatgcccatttccgctccagttgggatcggctcttccgaatctcaaatcacggttgatctgatccggtgtgtcgtggtggatccgttcgtcggtgcgtagaattgagaacgtgcttcgttgatttcctgatgtgttttggttcgccgtgtggatcctgttgtccgaatggtgttttcggcacagattttagttcatttcatatgctttggtgctgccaagtacagtacttagtgtagttgtttgcctgaatattggatgaggagttgaggacaggttatggtatactagtacttgggagttgggacttgggagaggtgaataacagtagtccttcaataagttacagataagagctcgtacagataagagttatactaagggcccgtttagttcaccaaaattttttcccaaaaacatcacatcgattctttggacatatgcatgaagcattaaatatagataaaaagaaaaactaattacacagttatgggggaaatcgcgagacgaatcttttaagcctaattagtccgtgattagctataagtgctacagtaacccacatgtgctaatgacggcttaattagtctcgaaatattcgtctcgcggtttccaggcaagttctgaaattagttttttcattcgtgtccgaaaaccccttccgacctccggtcaaacgtccgatgtgacacccaaaaatttccttttccccaactaaacacaccctaattctttgcacatcgatgtctctgattataaaataaaacaaaaggacaaaaacaatgatgttgttgcttgtcttctaaaaaaacatgtgcgtgtttgttgttttgtgtggatccatatgaccaccaggtgtatgccagccacatctcacatgggaccatattgggctatctcgtagtgatttactatcataatataggttgttttaggtacgaatatatgattctttagtcatattggcattttatttcataccattctgattgacaaaactacttgcatctattcaccatgtcgtagctcataactatacggattgtaatttcaattttgcaatcattattgacctattgtgtctaaaaatattatgaattgagaaatatatccttccagaaataaaccttgttatgatttatgaattctaggctggtatgtgaactaagattgacagttgctgcaaaagacttgaaccttcactaacctagctgaaccacttttatattgcagttgagttataattgtagttggtcttagtttgcaagttactttctgtgatgatcataagttcaagcgactcttagtttaatgactctaccttgtaagtcaaggagatatattttgtgctcacaatttgtaccaaacatgatatcttagttattcattattccgtctttttttttacctgtggccctgcctatatgttgaagctgacaagtagaaaacaaaaggctggtttgtttgttccctttagcttgtttgtttctacccttttggggtttgtgtttgtactgcttttaattttctttttcattaatgaaatgatatgcaaccctccagtatattggagaggaaaaaaacaaaagttacttactcttcttagttttataagttagtatctgcagttctgcacactaaatagtactcctaatggcaagtatttatttcaccttgtttatctgccttgttttgagtaaatgatctcttatgtcaatgatactttggctctcatgatcacacagattttaactgaactcctctcttgaacttcacgagtttttgttcaacaaagaacaatggaaggccggtcccagttgaatccagatgccagtcctttcataccttcctcactaagtcttttcacatacaatgattctaagagacaagcaggtgaaactgaaactgaaataaattacaaatctccgggatttttgcatgaactgaattggactaaacatttatgcagagtcatcctcgatgaacgatccttctgctagagcttgccgtccttccatgtgcgaggaaaatgatatggatccacttgctttgaccaaatctgtccttttaatgttcccgaatatctctgaggaattcattgatgagttactccaggcaaatgaatttgacatatgtctcacggttgatatgcttcatgagctgaattcacaaaatatgcttcatggtgatgccataatgggcttcccaacattcccagatgtgaagaaatttcacggcaacctagtatgcatatttctcttcttcttttttttttctttatcctttttcctttcacaatctgtacaatacaactgcttgctattttctttcccgttacaatagttcatacatatgccgtgcttcacaagggtgaaggcaacttctctaaaaaaaagggtgaaggcaaagcttacactgtttgtgccctctgaacaaagtaattgggcagcattgattacaacttctcttatatttcggtttatcactgcagggcctacctgatggtgatttgtctgaaagcaacagcagtcttgatcaatctcttcagaagggtatgtcactgacgacttctggtgcgaaatctgcctcggcaatgattccagataacatttctcttcatgataaactggtatacaaaaaaaatctgtatttgtgattttttttttgggtatgacaacataaaaaagcaatatctgcaatgcaattaacctcataaaagcctggaattcttgcttacaaactttccctgattggcttatttactgcagggtgtacagaaagacgataagccagcaattgcttctaccacaaattaatctgcaatgcatcctgctgtagattctgtattcttttactgctagtttgggtgcctgactgaaagtagtgcaaagtgcagacagtgcaaaactgcaaacaatgattgtcttcttaatccatgtttgaaggactacttggttttctgggtttgagcttttgaaagtgtgcatcgcagtttcagtttgcttgttagttgttaccgagagttgtataggtcttttgatgtattcgtcagtcactattatgtactctgaacccagtggattgtgcagcagcggcagctctcgtgtaccccctgcgagtgctacctatggttgtc</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0705500, RefSeq:Os06g0705500