Os02g0467500

From RiceWiki
Revision as of 19:14, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os02g0467500

Description

Peptidase C48, SUMO/Sentrin/Ubl1 family protein

Version

NM_001053352.2 GI:297599205 GeneID:4329328

Length

3720 bp

Definition

Oryza sativa Japonica Group Os02g0467500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:16507996..16511715

Sequence Coding Region

16511094..16511221,16511301..16511366,16511467..16511509

Expression

GEO Profiles:Os02g0467500

Genome Context

<gbrowseImage1> name=NC_008395:16507996..16511715 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:16507996..16511715 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>cagatcaaaggaatagagaagtatcttcgttatgccaaacaagatgaacacaagacttataaatggaattctacgaacatcacgaaatggccaatatgcccgatgcaagtgcctcaacagaaggacggatggtcatgtggattgtttacgctcaagtgcattgaacactggaatggaaaagacctatcccccgacacacgacaactacttttagagctaaagtggccaccaccttga</cdnaseq>

Protein Sequence

<aaseq>QIKGIEKYLRYAKQDEHKTYKWNSTNITKWPICPMQVPQQKDGW SCGLFTLKCIEHWNGKDLSPDTRQLLLELKWPPP</aaseq>

Gene Sequence

<dnaseqindica>3099..3226#3306..3371#3472..3514#agtttgaaccttcggtccagccgcgctttgatgaaatcacaactgaagcactggtcactgagcataaggttagcttcggtcattttttgtttattggccttatgtttccatacttctgaagctgttctatttttcatgaacttcatagcctgtcattatgaaagacatgactattgcatgttcaatacaaagatttctcgctgtagttgctaattttgacaagagtaagatatcacaaattgagaggattggatttggccggatgcttgccctgccagatatcacccttcaccgcaaactgattgggcaaattgctgagagatatgacagtaaaactgaaacaattaacatccaaggaacagcaataccaataacaacccatgatgtgaagtgtatcatggggttgcctgcggatggtatgattatcaagccaaagcctcacatgaatggagaagactacaaatattattcaatgtacaagcaacataaggggaagaacatttccctacatgagttggcaagacaaatcaatagtgcaaaacacccagatgagcactttcttagaagatttgtactattcaccattgggtacatcctatgccccaccaccaagccaatagttagttctcagtacctagcccttttgaaagacattgacaacattaagaacatcaactgggctagaatcacaagagattacttaatcaattgtctgaatgaattgaagggaggaaggagaaatctagaagggaatgtaccattgcttcaggtatgaaagtatccattacacgtctccatttgcaatccacattcagtgattcttgctctctttttttttcagttttgggcatgggaacatgtacacattaacgatccaatgtgcacactgacatacgttggaaggccaccgccgctaatggcctattggaatgaaatgaatgtaatgacatggctaaagtacgacaagaaatgtattcttgaaacagggactgtaagttacaactctttgcaacattaaatattagttttaacatgttaattacctactattatatactattcatattacattacaggttgtggttgtcatagatgatcctgaagagatcaaaggggacattgtcccagtacaatgtgaaggccaaattgacgaaaaaaaaattgatggtttcatggaagataacactgtggatgtcatacacatcgtacctgagcctgaagagatcaaaggggacaatgtgtcagaagactgtcaaggcgccactgccgaaaacaataatggtgatttcatcaaagacgacactcccaccaatgaagaaccggattatatgttcaaagcaactaaagaaagaacggctgcaaacggattcaactcacatggaagaggcgatgatgatgagagtccacaccatgtttacatagaagacgatgttaatgttccatcaagtcctgaaaatttcaaatatccagaggtaatagccaatgtatgaagtttaaacagttcaactcaaacctttattaaatctctctgttgaaggcatcaagtcctgaaaattacaaagatcctgaggtaatacccactgtatgaagtttaaactactcacctcaaacatttattaaatctctctgttgtaggcacatcaatcagccaatttcgatgcaattatgacacaactcatgcagattcaacaaggttgtcagtttctggacaacaagatatccacaaaactaatctcaatagagaatacttgcattcaaaatagaagagatattcaggtacagaaccaattttaacagttattgtactcataacaaattcaggtactaagttaatgatattgtacttgtactatttatgatttcgaacatgcataggcaataaagtacaggttgggtacaacttcaaggtcacgaactttccgtaaatttaaaccagcagccaaacaagaagagacagtaattgattccagggcagattgccgacaagacctagttgatgattcaaaggtaaggttgcaagcaaaatagtatattccaatgagcattacaaatgactaactaatcttgttgcatcttaacagaactacgatagtcaaccaaatggaacagctacttctccacacataatcgaaagcgatgacaatagccagcaaaatccaacactggtttttcaaataatagacctacatctacattacaaatgctacactgaccattatgctaattgcttgtacattgcagcagttatcaacaattggcggaaggcttagacgaccggagggaaggattatcaagccaacacacaagtcacaaactgatttcatctactacaaaaaaacatttccaaagccagttaaatctagtagggaaccgaaaccacatgatctaagcctgctggatgaagtaaccttgagttacatctctaagagtgaagacaaaaaattgctatcaacaattgcaggaatcaagatttttcgacagcatctgaaaccacttatcctaccaaaacaggctccatccaaagcaaagtggttgaacggcactgtaagcactgctatctcctgcttctaatttaaccaacaacagaataattaaacactcacaatatgcactgctattggacaggtcatagatgcatacatacaaatcatcatagacaagcaatccgacactccacgaggacagggaattgcactccttgaaactgcaacacaatgccagctgtggaaaattaatggtacagacaaaggtacatgcaacaagagatatcgtgatcaaagatctaaagttgctgccagctatttagagcatgaaatggtaatacatacatcgtatacattatatccataagtgaaaatgcatttcttactcatgattccgcatgtagattttcctacccttaaatagaaactcggcccactggtatgtagctgtcctggatggtgtcaatgaaaaaatccaaatactggactcactgcatatggataggacaagctatgatgcagaaaaaacccttaccactacggtataatgaaaacacatttcatacacttcccttctgaaagcactacaactaattatatttctttgcaatataacagatcaaaggaatagagaagtatcttcgttatgccaaacaagatgaacacaagacttataaatggaattctacgaacatcacgaaatggccaatatgcccgatgcaagtgcctcaacagaaggacgggtaaccatttctactatctgtaaataaaaattactatgatgtctaaatgtaacactataaacataattgaaaatttcagatggtcatgtggattgtttacgctcaagtgcattgaacactggaatggaaaagacctatcccccgagtacgatgcaatggcaagtattctctgctaagatctgctatgcgatctacgtgctgaagaagtatatcatgtctaatttttcctcgttttattatttcagcacacgacaactacttttagagctaaagtggccaccaccttgatcaattcaaccatgaatgaggtgattcaagtccaagaagacataatgcatctacacaaggaagaatctgaagaaatttgccacaaacaggagcaaaacatgtcaagtacttataattgatgataacaaattctctatttttatcttggtcaactcagtgatgtaaacgttctttcaaacagtttcagatatatgcagtactcaaac</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0467500, RefSeq:Os02g0467500