Os06g0707100

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Revision as of 09:34, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os06g0707100| Description = Multi antimicrobial extrusion protein MatE family protein| Version = NM_001065059.1 GI:115469849 GeneID:4342011| Len...")
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Gene Name

Os06g0707100

Description

Multi antimicrobial extrusion protein MatE family protein

Version

NM_001065059.1 GI:115469849 GeneID:4342011

Length

7464 bp

Definition

Oryza sativa Japonica Group Os06g0707100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:30754101..30761564

Sequence Coding Region

30754151..30754405,30754806..30755356,30755488..30755574,30755813..30755869,30755972..30756210
,30757093..30757211,30757300..30757386,30758414..30758470

Expression

GEO Profiles:Os06g0707100

Genome Context

<gbrowseImage1> name=NC_008399:30754101..30761564 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:30754101..30761564 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgagcggcggcggcggcgaggtcgaggcggcggcggaggcggcccctctcctcgtcccccacgaccctcagccggcggtgggggcggaggtgcggaggcaggtggggctcgcggcgccgctggtggcgtgtagccttctgcagtacagcttgcaggtggtctccgtcatgttcgccggacatctcggcgagctctccctctccggcgcctccgtcgcctcctccttcgccaacgtcaccggcttcagcgtcctgctgggaatgggaagcgcgctggatacattctgtggacaatcatatggagcaaaacaatatgatatgcttgggacacatgcgcaaagggctatctttgttcttatgcttatgggtgtcccgctggcttttgttttggcattcgctggccaaattcttatcgctcttggtcaaaatcctgagatatcatctgaagctggactatatgccgtgtggttgattcctggtctttttgcatacggtttgcttcagtgccttaccaagtttctgcaaactcaaaacattgtccatccactggtagtttgttctggggccaccttggtaattcacattttgctgtgctgggttatggttcattgttttgaccttggcaacagaggtgcagctttgtcaatatcattatcttactggttcaatgtgatattgctagcaatatatgtaaaagtctccgaagttggcagaaggagttggcctggatggtcaagggaggcacttaagttaaaggatgttaatatgtatctaaggctagccattccatctacttttatgacttgcttggagtattgggcatttgagatggtggttctccttgcaggctttctacctaatccgaaactggaaacttcgattttgtcaataagcctgaatacaatgtggatggtttatacaattccaagtggcctcagcagtgcaataagtataagagtttccaacgaactaggtgctaggaatccgcaagcagcacgcctatcagtctttgtttcaggaatcatgtgcctaaccgaaggcatacttgtagctatcatcacagttttggtacgggatatctggggttacttgtacagcaatgaagaagaagttgtgaaatatgtcgcagcaatgatgccaattcttgctttatctgacttcatggatggaatacaatgcacactatcaggtgctgctagagggtgtggctggcaaaaagtctgttctgttatcaacctgtgcgcttactatacaattggtatcccttcagctgttacttttgcatttgttctgaagatcgatggtaagggactttggttgggaataatatgcgccatgacagtgcaaattttagcgctggttgtcatgctgcttcgtacaagctggaatgaagaggctgaaaaggcccgggctagagttcagggttcagatggaagaatcacattggcctga</cdnaseq>

Protein Sequence

<aaseq>MSGGGGEVEAAAEAAPLLVPHDPQPAVGAEVRRQVGLAAPLVAC SLLQYSLQVVSVMFAGHLGELSLSGASVASSFANVTGFSVLLGMGSALDTFCGQSYGA KQYDMLGTHAQRAIFVLMLMGVPLAFVLAFAGQILIALGQNPEISSEAGLYAVWLIPG LFAYGLLQCLTKFLQTQNIVHPLVVCSGATLVIHILLCWVMVHCFDLGNRGAALSISL SYWFNVILLAIYVKVSEVGRRSWPGWSREALKLKDVNMYLRLAIPSTFMTCLEYWAFE MVVLLAGFLPNPKLETSILSISLNTMWMVYTIPSGLSSAISIRVSNELGARNPQAARL SVFVSGIMCLTEGILVAIITVLVRDIWGYLYSNEEEVVKYVAAMMPILALSDFMDGIQ CTLSGAARGCGWQKVCSVINLCAYYTIGIPSAVTFAFVLKIDGKGLWLGIICAMTVQI LALVVMLLRTSWNEEAEKARARVQGSDGRITLA</aaseq>

Gene Sequence

<dnaseqindica>51..305#706..1256#1388..1474#1713..1769#1872..2110#2993..3111#3200..3286#4314..4370#gagtcaaacccagccaccatcggaattcgagggcgcggagcagcggcgaaatgagcggcggcggcggcgaggtcgaggcggcggcggaggcggcccctctcctcgtcccccacgaccctcagccggcggtgggggcggaggtgcggaggcaggtggggctcgcggcgccgctggtggcgtgtagccttctgcagtacagcttgcaggtggtctccgtcatgttcgccggacatctcggcgagctctccctctccggcgcctccgtcgcctcctccttcgccaacgtcaccggcttcagcgtcctggtaacacttaaaccataattacatatactttaacttcgggttggtaaattcttttagtatgaatagttactcctttgttcggcaaaaaaatttgggaagtgaaaatcagtacaaagtacggcgcgtttgctttatggtaggacatcatatccaaaaattagttcaagttctacaaaaatacaatccatccaatgatctaaagaggccttgtatatgcttgtagttgtattgtgcttatggaattatggtgactggcatttctttataaaatgtatggaatctcgtttgtttttcttaaagaatatgtatggattctcctttgttctactatatgatgcctgatcttttacttgcaagaaaatttcaatgaaaactgcatatctgtttattccatgacaagctgggaatgggaagcgcgctggatacattctgtggacaatcatatggagcaaaacaatatgatatgcttgggacacatgcgcaaagggctatctttgttcttatgcttatgggtgtcccgctggcttttgttttggcattcgctggccaaattcttatcgctcttggtcaaaatcctgagatatcatctgaagctggactatatgccgtgtggttgattcctggtctttttgcatacggtttgcttcagtgccttaccaagtttctgcaaactcaaaacattgtccatccactggtagtttgttctggggccaccttggtaattcacattttgctgtgctgggttatggttcattgttttgaccttggcaacagaggtgcagctttgtcaatatcattatcttactggttcaatgtgatattgctagcaatatatgtaaaagtctccgaagttggcagaaggagttggcctggatggtcaagggaggcacttaagttaaaggatgttaatatgtatctaaggctagccattccatctacttttatgacttggtaagcagcctgacatggagcaaccctgttcaacaatagatactctctttttatgatttaacagataagttacatgaaataccttgttctttctgcatggaaataattatttgacttgtgacataactcagcttggagtattgggcatttgagatggtggttctccttgcaggctttctacctaatccgaaactggaaacttcgattttgtcaataaggtgagcaaacagaatgtctgcattcctttcagtatagtttctagcaaatgagtttagttccaaagttgttccaaaacataaataataggctgtacatttcaaattcatggtattacatgcatttgctttttaaattttctgtgataaccatgaaatacacagctagcaacttagcatgttcaatggattatgctttcagacacttgataatgtgaagtaatgaatggtttgtttccagcctgaatacaatgtggatggtttatacaattccaagtggcctcagcagtgcaataaggtcagcagagcagaaatttgggatgacttttcctttcattttatgagatttgacacctcaaagcttatctaattttggcccatggctcatgtctctttgcagtataagagtttccaacgaactaggtgctaggaatccgcaagcagcacgcctatcagtctttgtttcaggaatcatgtgcctaaccgaaggcatacttgtagctatcatcacagttttggtacgggatatctggggttacttgtacagcaatgaagaagaagttgtgaaatatgtcgcagcaatgatgccaattcttgctttatctgacttcatggatggaatacaatgcacactatcaggtttgggataaaacacacatccaaatatgacaattctgcatttatcacgtagtgcctacactccctgtttttaatcatacatgtaaccagaataccagattgcatatctttttacattgttgccaatcttgcagttggccgttttgccccattacagtgccacttctaataataataaagcccttgaattgtttatatgttgcatgtcacggcctgtttaagagctttactgacgtgccttgtacaatccaattagactcagtaccactaccattccaacgcccaacgatttcactatgcaatctaccagcaacaccagcattaagagagatagtatagaagttttagtgtgtgattacgagaaattattctactgtagaaggatggtaatgtaagtattatgtaggagttttactatgcaagctaccagcaatgcttgtgttaaagaaggctgaccatataagtactgtgtagagaactgtgcctagctcggttggtatgggttgattgctttcacccagcagacccaggttcgaccccttgacctgctcatattccactggattaaatgaagggatggaaaaatatgtggcttctcctatcttaataccattggagtgctagtttttttttgttctgtttttttttttaaagaacaaagagtgctagttcatatgccattttctggggggtgatgtaatcttttgatattttagacttgttattgttcatgatatttctacataatttagttttttttaaccttggtcaaatattttatgttgcctttattatatcacatccatagtaaccatgatgccaacaaacctcaatattattgatcttagtcaccatttgtttattttttttatgactcttaaggtgctgctagagggtgtggctggcaaaaagtctgttctgttatcaacctgtgcgcttactatacaattggtatcccttcagctgttacttttgcatttgttctgaagatcgatggtaaggtaaattttattttttatatgcaattctggcatgacattgttgtgcaagttctgtcgtaatcccactctgagttggttttctgtgcagggactttggttgggaataatatgcgccatgacagtgcaaattttagcgctggttgtcatgctgcttcgtacaagctggaatgaagaggtacacccttaaacttataacctttacagtcaaagaattgatgcttattttttcccttttttaaaaaaaaaaatcgaaggcacaagatctccctctagcccagtaggaactaggaacagaaggacatgcactgttccagtagtatgaaaaattgagattgggcagtagctacgttcagtggcaaagccaggatttagagatggggggtgccatctacgagacatggtaattcacttaaggttcaatgaacagtgattttgtagtgttgatgcatgatcggtaactcgatatcatacatgttacagcgattagctacaagagagaacaagaacccatatatcatgattcgccaatttaaaattcagtaatatttttaatatatggatgattgaacagtttgttccattaattggagtcttgcaatcacttctaaaatgataaatcagttagctaagtcatttcataagtcagttgtcttatatcctatatagttagtctcatctgtaactaatgatataattaatagctagattataagtgctaatcatccttgggagaagagaggggaggggaggtcacataggggttaggggggtgttggccctccctggcccctacggtggcttcgccactggctacattgacctccacaaaattgctgaagcagcacaggactttacacctggtgaatgcttctcagtgcctcagtggggattggggaaggggatgcataactgatatctatgaattgctggttttctgctttgtcacaagaaactaacttgcaattattctttcctctgaaattaatttgcatggagaaatgcatatcaatcgtttccttctaactggtttggtatgacatggaagtctggtttgattgagtctgcgtggcatacctgttgagccttacctcaccagtccttcctgctgtgctgagatgacatgatatgctagcagtctttgtcttactatgttgtctataactaacttgtccttgatgcgtttacttttgttttctttataggctgaaaaggcccgggctagagttcagggttcagatggaagaatcacattggcctgaacatggatttcaccagttttgagtcatgattataccaccacaaaagcagttattgataccatagtactatatatagagtaattgatactgttgattatttgaaacttgtttgctgtacattcaataattgtaactgattgggcatgtgacttcttttcttttgtatagttgatatggtgtgctgtgaatgaaattctgcatagttcgccctgcaacacaggataaaggtaactcctaaccatcttttccaacacaattctatttccgtgtttgaaaagctttttcgaacatttttctacaattagtgcccaagtggaattattggagtagatgaaactaaaccatcagaaactgaaattgaagtcaccaaagcataactagggcagggtactgcaaatttatttttatttccccctccataccagatcagattgctattgttaatcttttgaagacaaagaggagtaatcattaaattactattatgagacactggcctacctaattcgatgttcttttcctgaggaaggtaccaagctagtctagcttcgatctgagagtcgacgagtaccatattacattcctacatgctttagttgttgctactcctctctcagttatagtagatgtataatgcgaaaaagaaacaaagttcaggaatttcctccttttaatgcaaagacatggaaagcttttgtgcattcctaaaaacaaggttcatgaagaaaatacagcataaaccacaccgttataatttgtcaacatccttgaaaattaaggcacgccctcttatgttaaaacaaacagttctggttttacaactcatggataataataacccacccgttcttccctatgtctcctggtagatggcacagcacaaaaaagtctgcagagattctggaacttcctctctggtcttcccattcaaaaattgttctttaaaacacatgcttttacgttagctggtgctgtagtggtgtttctataggcacaatggtacttagatcatcatcctgggtcttggtcttagtttatgatttatcactgttcttgcttattctctatcgcctctgtcttcatttttctttggagtactatatacatatatatatatatatatagctgctctaatatgatatttcgtggttaaaattcctggctccatcttgtttttcactcactttccgccactcagcatcctcagatgttatcatttatcatacatgtgtccctgtattgttggaccagaagtcttcggcacgtaaagctttagataaagcagcacctgacctgagtcagagcttctggacgcatatcataattgcttccctgcttggctagcttaatatacaaggccaattaagaatgcatttatcagaagaacgtgcacaaaccacccttattgatggcatccaaaagctacatttcctctgccaattaggtctgtgaggtcaaaggtctgatgaacctggcaaaagcagagacagatttctgaccacagaaccttcatctcagtgcagaattttcaaagactgcatttctattgtacagtaacatttccctggaaagactcctttacatatgatcagagacaaatgaggcttttgcaaatgtaaaacaatgaagttccacctttgaaagttgaaacccactagaaaggagacagataaagcattatctatgttgagcatatgtttggagtactaaggaggaacttagcatctgttgaggaatttagcatctgttgttgttagagaagaaaataatgagaaaacctgtgatcaaagggattcgaactcaggcaagcatgctgctccctgtcagccgagctctccctgccaaccaagctaggtgccgttctcttctacataagtagtagacgaaactcagctggttttaactgcatagacaagcattttgctgtccttctgtcagtaaccatgaaatgcaacacacggtcacccttgagctggtgagacacagctatcagccacaaagcagatagtactttgcttacaggagatgattctggagtgctttctttctggtttcggcagctcaatgatcccaccgtgaaaggcgaggaagcaacagaaatttggtagctcctccaaagtggagattatcgtggaagctgagctgtttccaaatcccaatactacacctactaatcgtctcttatctgaaagataccactgatcatttctgaataacgaaaaaaatgagaatgtgtaaataggcaaagttctatgattaaggccacgattgtcggttatttgggcgttttccacatatgattgatggcatctaatgatcacatttctactgattatatctctgggtcggttcagtaatgaggaaatgagagggaaacggctccttcaagttgttttactgtcttgtcgtgcagtctttttcttgtgggaaacagttcaacaaccactgcagcttgttgggtacctgggttcatggattcttttaagaccttttctgtggtggtcttgtttggcagtgcttaccttaaagctcttgcaaactggcttctcagatgaactctgaatatttcgttgtctgtacaggtagtgtttcagtttaccctatgagctacaactaacgacataatgtcagtgggtgcttaaagagactagtctctaggtacttttaaggtaatgtcagacttccgactgaatgcatatctgaaaactatgttcttgattgagaacaaggggggcatggttaaccatttcttttttgtttcagaaaggccagattggtatagctgaaatttgtttttttgctcattcttttctcgatataagttgaacattgccttgttttacaaaattgctcggactattcagatttacatactattgatcgtcatctcatattattgatcatcaccatttgcttggcaggttgtcagaattaaagactgccaagatcttggaagaacactattggtggtggcaaaagtgaattgttcatcactccccacaaacaaataattagcatttttcatgttgacattttatcgacaacaaccaatttacaaagtgtgcaagtgtaaattaacctttggacacttgtc</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0707100, RefSeq:Os06g0707100