Os06g0707800

From RiceWiki
Revision as of 09:34, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os06g0707800| Description = Similar to NBS-LRR disease resistance protein homologue| Version = NM_001188059.1 GI:297725248 GeneID:9266824| Lengt...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os06g0707800

Description

Similar to NBS-LRR disease resistance protein homologue

Version

NM_001188059.1 GI:297725248 GeneID:9266824

Length

5901 bp

Definition

Oryza sativa Japonica Group Os06g0707800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:30816761..30822661

Sequence Coding Region

30818016..30818032,30818146..30818798,30820117..30820154

Expression

GEO Profiles:Os06g0707800

Genome Context

<gbrowseImage1> name=NC_008399:30816761..30822661 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:30816761..30822661 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>gccatttgcattaagacagttaggacagttggagctgatttcttctcctcctactcatcatcttcctcatctttcccatttccttcctccctgaaatatctgtctattgaccgtgtaagtggcatggagactctgtcgctcctctctaacctcagctctctcaccaacttaggcatagaatgtggtgatttaagaggcgaggatttgtgttctctgctcgcccaaggccaactcacaaggctgcgagtcaacaagaaccccaaattcttcgtcgggatcaacccctcatcactgcagcaccttgtaacggatgacatcgcaggagtgcttgttgtgcccatctgcagactcctctccccctcactcaccaagctaaccattttttgcaataacgaggtgaaacgcttcaccaaggagcaaaacatggcccttgagcacctctcctcccttcaggagctcagttttagtttttgccggctgcagttcctcccctctgtgttacacaggcttgttagcctcaagagattagagatctcgtgcagtgagttcatcagttcgttgcccaagagtggtcttccaagttcactagaaatactagatgtctctggaggcagcgaggagctcaaaaggcagtgccgcaagctaagaggaaccattccaatcatcaaagacagcgactgggatttgattgattctttcttggattag</cdnaseq>

Protein Sequence

<aaseq>AICIKTVRTVGADFFSSYSSSSSSFPFPSSLKYLSIDRVSGMET LSLLSNLSSLTNLGIECGDLRGEDLCSLLAQGQLTRLRVNKNPKFFVGINPSSLQHLV TDDIAGVLVVPICRLLSPSLTKLTIFCNNEVKRFTKEQNMALEHLSSLQELSFSFCRL QFLPSVLHRLVSLKRLEISCSEFISSLPKSGLPSSLEILDVSGGSEELKRQCRKLRGT IPIIKDSDWDLIDSFLD</aaseq>

Gene Sequence

<dnaseqindica>4630..4646#3864..4516#2508..2545#gtgtactccacttatccactactcctccaccagtttgctgcagcttgctttgctcctacgcccgtgcagctcgcgcgattccggctgcagcgcacgttgggatcgatggagtcggtggccgttgaagcggcgcggtggatggtcggcaaggcgctgagcccgctgtcgggagggctcgtcgaggcgtggctggcctgctcggagctcggcaccaatgtcggcgccgtcaagctggagctgctctacgcgcaggtgatgctcgacaacgcccgcggcagggagacccgcagccccgcgctgaagcagctgctcctgcagctgcgtggcctcgcctacgacgccgaggacgtgctggacgagctggactacttccgcatccaggacgagctcgacggcaccgacgaggccgccgacgagcacaccagaggctgcctccatggcctcctcctcaacacccgccacaccgccagaaacattaagaagaggtacctttctgcttgttgctcgggcggaggtgacgagaaagctgttgccggcagtgacctctctttagctggtgaacatgatgccgatgacgactgtaccgatgaagacgacaacgacaccggctctactgatatcgaccacagctctactgcaacgcacatgcctagaaaagaaaaacagtggggatcacagagggaggacactatgaaaacaccaaagctgaagttcgatagggtggatctgtccacaagaacgaagcacatctctgagcagctgaagctagtctgtgccaaagtctctaccattcttaatctagagttgccggaatcaaatcgcaccattcgaagcagcattgctatgcttcgtcctgtgaccacttcagcgactatagagcctgaattttatgggaggaagggtgagaaggatagaattattaaagacataactcatggtgattgctgtgtcaaggacctgaccgtcattccaattactggtccaggaggaatagggaagacagctctcactcagcaaatttacaaagcagtaaagaacctttttgatgttaatgtttgggtatgtatctctctcaatttcaatgcgtacagattgaaacaagagattgctgattcaatacctaaagttgagaatgagcaactgggtgacctagatgagaatgagcaactgggtgacctagatgacttgattgagcgaagattgaagtcaaagaagattttgcttgtcttggatgatatgtggaattgcagtaatgaggatgattggaaaaggctattagcacccctcagaaacgcacaaacaaagggaaatgtgattctagtcaccactcgttttccagcagttgcagaaatagtacaaaagacttatcgtccaatacaattggaagggctggaatttgaagagttatgggaattgttccaagcatatgtgtttggtgatgagaaattaataaaccatcatgctatcttacaacagactggagaaatgatagccaaaaaactaaagggctcccctttggcagcaaaaactgtaggtcgattgttgagaaatcaccttgatttcaatcattggacaagtgtcctagaaagtaaagaatgggaattacaaactggtgacaatgatattatgccagcattaaagcttagctatgactatctccctttccatctgcaacaatgttttatatattgtgctttgttccctgaagattacaagtttgacagtgatgagttgattcacctatggataggactagacattttacaatcacatcaggaccaaaacaaacgaactgaagatatagcattgagttgtttgaatcatttggttgattttggatttttcaaaaaaaatgtgaatgaagatgggtctccttattacagtatgcatgatctactacatgagttagcattgaaggtttcatcctgtgaatgtcttgctgtcagtagttctaacgtaaggtttgtgcaaattccaccatctatacgccatttgtctattgtgatagatgacatggatgtaaatgatagagtgacttttgaaagcatcaagacggatttcagcacactaagtaagagactggatgttgaaaagctacactcttttatgctatttggacgattccatggaagctttatcagtcctcttggtgatttgttaagtaacgcaaaatcactccgcgtcatcttgttgtctactccatcatatgcagtggagaatatgttgcacaacttttcaaatctcgtccacttgcgctacttaaggattattaggggatattttccagaaataaggctacccaacaccatttcaaggttttatcacttgaggatccttgatgtacgaaaatgcaatggtcactttggtttaccaagagatatagataatcttgtaaggctacgccattttcttgtccccgatgacaatctccactctgacgttgctaatgtgggtaagttaaaatgtttacaagaactaaggagatttaaagtgaaaagacaaagtgagccatttgcattaagacagttaggacagttggagctgaacggaacactaggcatttataatcttgaaaatgcacaggcggcggacgaagcaaaacttttaaacaaaagtcatttgcacaagttaatattacattggtcaacaaaggattgttcccaagatgaacatattcttgaaagtcttaagccacataacaatcttcaggagctacaaattgaagggcatggaggtgccacttgcccatcatggttaggttttaacttgtcaatcaaaggcctgcaatctcttagtctgcatggtctagactggaacaaattcccacctataggggagttatggttggttaaccagcacagtgaaaaatccttgagttgtatagaaggccaaagcttttggaatttaaaaaggttagagctagttggcataccgcgactagaaaaatggaccggaaatgatgcttcccgtgtgttctctcagctagaagtgttcatagtaagagattgcccagaacttatagagttgccatattcaaagatggacagcactcaattccctacactaaaggagcttgagattgtaaaatgcccaacgctatcatcattgcctcccgttccttggacaaactctccatgccgtgctctgattgaagaagtgagatcagattttcagcacttgaagtactcaaatttataccaatctaaatcacacttgtgggttgcgggaaagaagggccatctgaattgtgcattctcaaaagtacttgcatctagtaatttaactgagatgaaatatttgatcttgacaaaatgcccttttttgccgttggaacacctccagatgttatcatgtttgaagaagcttgaaataaatggttcaagtagttccttgttgatggttgaaggtgggagcgctgttagataccagtttccagtaaagaaacttgtgatcagaaagtgtggtgctagcgggaaggaattgacgctgctgctgtcccatttccccaaactctctgacttgacaatgtatagattggagaagatagcaatgcttggtgtggctgagcagcagataacggcaacatcggcatcttcaccatcactttctggtaataagttggagaatgcacgtttcggacaagagcaacaacagccaagaggagaggacgagaaagcagcggcatcttcaggactgctgctcttgcctacccagctacaggagttgttcatctcctgttgctcaaagctgatcctccaccacgattcacttggagaaaacatggaaggacgcctaagaggcatagaaggagggttacaaggcctgcgctccctcgtatcattgactattatcgattgccctgatttcttctcctcctactcatcatcttcctcatctttcccatttccttcctccctgaaatatctgtctattgaccgtgtaagtggcatggagactctgtcgctcctctctaacctcagctctctcaccaacttaggcatagaatgtggtgatttaagaggcgaggatttgtgttctctgctcgcccaaggccaactcacaaggctgcgagtcaacaagaaccccaaattcttcgtcgggatcaacccctcatcactgcagcaccttgtaacggatgacatcgcaggagtgcttgttgtgcccatctgcagactcctctccccctcactcaccaagctaaccattttttgcaataacgaggtgaaacgcttcaccaaggagcaaaacatggcccttgagcacctctcctcccttcaggagctcagttttagtttttgccggctgcagttcctcccctctgtgttacacaggcttgttagcctcaagagattagagatctcgtgcagtgagttcatcagttcgttgcccaagagtggtcttccaagttcactagaaatactagatgtctctggaggcagcgaggagctcaaaaggcagtgccgcaagctaagaggaaccattccaatcatcaaagacagcgactgggatttgattggtaatgaacattctcttgtttgagccatcccggttcactttctgtttggcgcaacgttaatactgtgtgattcatctacctgaaaaacctgattgttctgaaatcctgtgcagattctttcttggattagtatgtgccttattctagtcttggagaatcttctctgcatccatctccattgagttgataatcaacttgtgctgcttccatcacgtgtacaaaaactggtctgtcatttcatacgagttcatatctgatgctttagatgctcattttttggttatctgtctgatcgcactcttctctttttgcaatctttcagctgttctgaataggtattggcagtgagagaattgtgggatttaatcccctgcacacagaaagaacttcaccttgtcgccgcctccaccgtctgtcagctaggtaacgagcaaacaatccttttccgggaggacaattggttgcaaggaggaaccatccgagctattgcaccctccatctacgatcatgtctctactcgtatccggaagcgccggatggtggctgaagcgctgtctaaccgtagatggatcaaggacataagtggcgcgcttgggactcaggcaatactcgaatacctcaaactttggtcgctgattcagtcagttgattgttcttccgcagagcccgactcactctcctggaagtgggaaagctcaagcaaatacacttcaaaatctacctaccgagctttgttccttggacgaattgcctttgaatccacaccgatctagaactcgttggcaccacctcgctgtcatttcttcctctggctggtcgcgttgaatagatgctggacagccgaccgattgcggagtcggggattgccgcatcccgaccgctgcattctctgtgatcagcaggatgagagcattgatcatatcctagtcggctgcccagaatcaaggcagctttggtggtggactttgagagcaatcggccaccccaactgcctgctggtgaatgaagcttcttttcaccaatggatgtgcgatagcagaatggtgctaagtgagtcacatcgttgaggcttcgacacggtggtgacattggtagcatggacaatatggaaggaacggaacggtcggatcttcaatcagcagtgtagatcttgggcggatgtggccagagggatggtggacgaagcctctctttggcgtaaagcaaacccggcgatccttgcgctgtaattcaggagggagtttggtcgccaaaattagcgtgagagatagacttaggattgtctgttattgtcctgtatcagtcccgtgctgtttttttttctttcaaatgtaaataacttttatttctcttaatggaaaaaatgcgctccttgcgtattcccg</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0707800, RefSeq:Os06g0707800