Os06g0708500

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Revision as of 09:34, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os06g0708500| Description = Similar to Cyclophilin| Version = NM_001065070.1 GI:115469871 GeneID:4342022| Length = 2424 bp| Definition = Oryza ...")
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Gene Name

Os06g0708500

Description

Similar to Cyclophilin

Version

NM_001065070.1 GI:115469871 GeneID:4342022

Length

2424 bp

Definition

Oryza sativa Japonica Group Os06g0708500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:30850901..30853324

Sequence Coding Region

30850988..30851101,30851351..30851429,30851826..30851873,30851967..30851990,30852457..30852639
,30852748..30852823,30852923..30853061

Expression

GEO Profiles:Os06g0708500

Genome Context

<gbrowseImage1> name=NC_008399:30850901..30853324 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:30850901..30853324 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcggggagcgggtggaggaggatcccggcggtgaggaggccgcccatgtcgcgcccggcctcggtctgcctctggatcgtgctcgtcgccgccaccctggcgctcgcccaggcgaagaaatcgaaggcggatttgactgaggtcacccacaaggtctacttcgacgtcgagattgatggcaagcccgcaggacgggttgtcatgggacttttcgggaagactgttcctaaaacggcagagaacttccgagcactttgcacaggagagaaaggaactggaaagagtggcaaagcactccacttcaagggaagtgcattccacagaattatacccagctttatgatccaaggaggtgacttcacacttggtgatggaaggggtggtgaatctatctatgggacgaagttcgccgatgaaaacttcaagatcaagcacaccggaccaggcctcctgtccatggccaatgctgggagagacacaaacgggtcccagtttttcatcaccactgtaaccaccagctggttggacgggaagcacgtcgtgttcggtaaggtgctgtctggaatggatgtggtttacaagattgaagctgagggccagcagagtgggtcaccgaagagcaaagttgtcatcgcggacagcggcgaactgccgatgtaa</cdnaseq>

Protein Sequence

<aaseq>MAGSGWRRIPAVRRPPMSRPASVCLWIVLVAATLALAQAKKSKA DLTEVTHKVYFDVEIDGKPAGRVVMGLFGKTVPKTAENFRALCTGEKGTGKSGKALHF KGSAFHRIIPSFMIQGGDFTLGDGRGGESIYGTKFADENFKIKHTGPGLLSMANAGRD TNGSQFFITTVTTSWLDGKHVVFGKVLSGMDVVYKIEAEGQQSGSPKSKVVIADSGEL PM</aaseq>

Gene Sequence

<dnaseqindica>88..201#451..529#926..973#1067..1090#1557..1739#1848..1923#2023..2161#tggagcaacagatctatccatccatcccatcctcgatccttcattcctgcccggcggcgagcgagagagaggcggaggagatccgagatggcggggagcgggtggaggaggatcccggcggtgaggaggccgcccatgtcgcgcccggcctcggtctgcctctggatcgtgctcgtcgccgccaccctggcgctcgcccaggtgctcatccacctcgtccgtctccactctccaccacgcctcgctcctcctcctgcttccccgtatctgcgtgtgatgtgatgcgtgtgctctccgatctgattcgattgtttgtgctcgtgcgctgatttcttgatctgtttgatctgtggatccaattggccctggtgtgctgatttgttagaattttgagtggtgcctctatgtgcatctatgcgtactcacctttttttttttgttgctgtttaggcgaagaaatcgaaggcggatttgactgaggtcacccacaaggtctacttcgacgtcgagattgatggcaagcccgcaggtttgtgttggccccctatgtttagctctactaccatatcagcataatatataagtcttcaggcagaaagaagaaaagatatgcatagtttgatgtgtctagcattagcaaatacggagcagtaacaatttaatttgcattaattgtgtcccaccgttgtgtataagtgacttgtgatgggctgatgtcatatgcagtgattattacagttagagttatcagcatttgagattgacctgaagctaactctattatgatgagaatttagcttcttctattgttgtttatgtttaaggagaaacgttgatgtgatatttgtgtatgtactatttataatgtctttcctgttaatgattgccttactgacatttattattttttcttgtattgccataggacgggttgtcatgggacttttcgggaagactgttcctaaaacggcaggtaccatttgcttatcatttagttaggtaacaggaaattcattgtcatatcacaaatgctaatgattcactatatcttttttttttcctacagagaacttccgagcactttgcacaggtatgctccctgatgatttatactgtttttattacattagatgtgttcattcatcttctgctagagtttccagatggttaatcccatggcaagcttggtagtggcagcatgtagaatttccagcattgaataacactttctttgccactttaacctgaaattatttttgaatgcacaacttttgtgtcattatcaagtttggccaatcaaatatactgttacagttgactagttaaaaattgatgcaaaaatacatcagctcagctgttgtcattattcatacgcaagtgtagaatattatgaaaacccataaaagtatttacttcatataatgagagagatcccattctggacagcgaatagcactacaatctgtgtggtagcattccctgatgcctacttgtggttattatacgtaatctaagtttgggtttgatgtagcgctttcaactttgttgttatacaggagagaaaggaactggaaagagtggcaaagcactccacttcaagggaagtgcattccacagaattatacccagctttatgatccaaggaggtgacttcacacttggtgatggaaggggtggtgaatctatctatgggacgaagttcgccgatgaaaacttcaagatcaagcacaccggaccaggtaattttcgttatttcctgaaccatttttttactacactatagacgcattatttgtgtggtagaccatcaaatcatccttgtttgatttgatctcatgtttatgcaggcctcctgtccatggccaatgctgggagagacacaaacgggtcccagtttttcatcaccactgtaaccaccagctggtaatcgtcgtttcctcactagcctttgtaatcatagcagcactatttctaatttgtactgaagacacttcaatctgttgaaactatttatttgattaggttggacgggaagcacgtcgtgttcggtaaggtgctgtctggaatggatgtggtttacaagattgaagctgagggccagcagagtgggtcaccgaagagcaaagttgtcatcgcggacagcggcgaactgccgatgtaatgagctgaaatgatgtttcactgaagctactgctactgcttctcgttgtagaactgttattagctgctctgttttgctatgcttctaccccgaatctggttggagtaaatttctgttagactataacagcgtgcttatatcgcctcttagttgtgggcgatttggagtgaactagcataaaaaggtcgaaactttacttaagtcgtcttcttgttctaagtcgaattatactttgaagtgacttgcttactgttgagcgcttg</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0708500, RefSeq:Os06g0708500