Os06g0708700

From RiceWiki
Revision as of 09:34, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os06g0708700| Description = Similar to Nodulin-like protein| Version = NM_001065072.1 GI:115469875 GeneID:4342024| Length = 3033 bp| Definition...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os06g0708700

Description

Similar to Nodulin-like protein

Version

NM_001065072.1 GI:115469875 GeneID:4342024

Length

3033 bp

Definition

Oryza sativa Japonica Group Os06g0708700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:30855900..30858932

Sequence Coding Region

30856783..30856957,30857363..30857514,30857637..30857792,30857913..30858219,30858314..30858430
,30858503..30858837

Expression

GEO Profiles:Os06g0708700

Genome Context

<gbrowseImage1> name=NC_008399:30855900..30858932 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:30855900..30858932 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggggagggaacggggtggcggcgaggggatgacgatgctgcagcggtggtcgtcgtcggtgtggagcgtgagcgggagcgggcggctgctgtgggcggacaaggcgtggcgcgcgcacgccgccatggcgttcacccagctcgcctacggcggctaccacgtcctcaccaagtccgtcctcaacgtcggcatgaaccagatcgtcttctgcgtctaccgcgacctcgtcgccctcgccctcctcgcccccgccgccttcttccgcgagcgccgcacccgccgccccctcacccctcacctcctcgcctccttcgctctcctcggcttcaccgggatcttcgggaaccagctcctgttcctgctgggcctcagcttcaccaacgcctcctacgccgcagccttccagccagccataccggtgttcacattcctcctagccgcaatcgtcggtgttgaggtgatcaatatcttcaccaaggacggcatcgtcaaggttcttggcacggctgtgtgcgtctccggagccgtgctgatggtgttctatagaggtccatccttgattggcatgggaggaggaggaggaggaggctccaatggtgtgggtgagaatgtcctggccggcacatggagcagcaattcttacacgccccaatggttgacatcggccatgctccaatacggtctagaaacatggaatcttggtgtcatctgcctcattgggaactgcttcctgatgggcgcttatctggtcatacaggctccagtgctgataaaatatcccgcgagcttatccttaacagcttactcttattcatttgccactgtattcatggtgctgacaggggtagttacaaccaatgggctccatgaatgggcattgacaacgaccgagatcattgctattctatatgctggaattgttgcatcttgcttgaattacgcaatcatgacttggtcaaacaaaatccttggtccttctctggttgccctctacaatccactccaaccagcatgttctaccatcctgtcaactatatttcttggtaccccaatatatcttggaagcattattggaggagtctttatcattgctggtctataccttgttacctgggcccgttacaatgaggcgcaaagggtactggcaattggatatttagaccctcttcttgtggaggatgaggatccaccaactcccaagacacaggaaagttctttcactggctccattgatccttaa</cdnaseq>

Protein Sequence

<aaseq>MGRERGGGEGMTMLQRWSSSVWSVSGSGRLLWADKAWRAHAAMA FTQLAYGGYHVLTKSVLNVGMNQIVFCVYRDLVALALLAPAAFFRERRTRRPLTPHLL ASFALLGFTGIFGNQLLFLLGLSFTNASYAAAFQPAIPVFTFLLAAIVGVEVINIFTK DGIVKVLGTAVCVSGAVLMVFYRGPSLIGMGGGGGGGSNGVGENVLAGTWSSNSYTPQ WLTSAMLQYGLETWNLGVICLIGNCFLMGAYLVIQAPVLIKYPASLSLTAYSYSFATV FMVLTGVVTTNGLHEWALTTTEIIAILYAGIVASCLNYAIMTWSNKILGPSLVALYNP LQPACSTILSTIFLGTPIYLGSIIGGVFIIAGLYLVTWARYNEAQRVLAIGYLDPLLV EDEDPPTPKTQESSFTGSIDP</aaseq>

Gene Sequence

<dnaseqindica>1976..2150#1419..1570#1141..1296#714..1020#503..619#96..430#agtcagtagacgccttccaagacaagctcaagcaaaagcaagagacaccaaccggcggcgaggaggcaggaatcgcggcggcggggtcgccggagatggggagggaacggggtggcggcgaggggatgacgatgctgcagcggtggtcgtcgtcggtgtggagcgtgagcgggagcgggcggctgctgtgggcggacaaggcgtggcgcgcgcacgccgccatggcgttcacccagctcgcctacggcggctaccacgtcctcaccaagtccgtcctcaacgtcggcatgaaccagatcgtcttctgcgtctaccgcgacctcgtcgccctcgccctcctcgcccccgccgccttcttccgcgagcgccgcacccgccgccccctcacccctcacctcctcgcctccttcgctctcctcggcttcaccgggtattcatcgattcctcctcttcttcttcttctccttctgctcatcttatcgatcgatctcttcttctccaggatcttcgggaaccagctcctgttcctgctgggcctcagcttcaccaacgcctcctacgccgcagccttccagccagccataccggtgttcacattcctcctagccgcaatcgtcgggtaaaattggttcatgatttggaaaattatctactcctgatgttgcattggcttcaaatttcaactgaattgagtgaaattacgcgtgttgcagtgttgaggtgatcaatatcttcaccaaggacggcatcgtcaaggttcttggcacggctgtgtgcgtctccggagccgtgctgatggtgttctatagaggtccatccttgattggcatgggaggaggaggaggaggaggctccaatggtgtgggtgagaatgtcctggccggcacatggagcagcaattcttacacgccccaatggttgacatcggccatgctccaatacggtctagaaacatggaatcttggtgtcatctgcctcattgggaactgcttcctgatgggcgcttatctggtcatacaggtgatgcaaactttggaacatcttatccttggtgaagattaatatctatatgttgataaaatgtctttatttttgttggaaaaagaatgtctattgacagggttgctttcttatgtgcaggctccagtgctgataaaatatcccgcgagcttatccttaacagcttactcttattcatttgccactgtattcatggtgctgacaggggtagttacaaccaatgggctccatgaatgggcattgacaacgaccgagatcattgctattctatatgctgtaagcatgtttatattcccttgggcttatattacatagacttgtgtatgaccaatgcaatgctaatgtttatgatcctcctctagcatgttctaactgaatttattggtttgcttcaccagggaattgttgcatcttgcttgaattacgcaatcatgacttggtcaaacaaaatccttggtccttctctggttgccctctacaatccactccaaccagcatgttctaccatcctgtcaactatatttcttggtaccccaatatatcttggaaggtataacggaaaattctggcatgtaataatgcgaaatgtgttctttgaactttgccatttgacggtttctgaaatttgggattcattcaactgtagtcgctctgcattgcgttcattagttgcttctgatactcgttccagacaatagtcgctcttcattgtgtttattaattgtttctgatactctccagacaaataatcttcatattggtgttaataccggtgaaaatatgataaaaactgttttttttacagataacattgccaatatcgctttgttcatttcactcccatactattttagaaaaactcctttttggtcctctaaactatagaatttcaagaaacttcaaagtatacataatgtcataatcacgtgttgtatgtttccattctacttttcagcattattggaggagtctttatcattgctggtctataccttgttacctgggcccgttacaatgaggcgcaaagggtactggcaattggatatttagaccctcttcttgtggaggatgaggatccaccaactcccaagacacaggaaagttctttcactggctccattgatccttaaatgagctgtcctgaacagtagctgcagaattacttcacgtataaatacagttctcgcctatactcctacgtcaagatttccatcacttttagaatttgtagttggtttatgttccatctccatcatcaggaatatcagaatactgagctctatgctgaaaataagtttgaacaatagccattgttttgagctcatatcaaggagccattttttcatcaatggaggtgccattggctaacaatggtcagtgatcctccagcttcaacagttgtttttacagcccactggtggtcaccagtaggaacagcttcagtgattaaaggtagaccttaaatagcttgttacttactgattctacttatcgcataatagatcgtatgtatattgttaccatctgatgttccatttgtaatattgaaaagttatgcacctaaagctacccaaagatttaattcatatttgtaccacacttaattaacaaaagaactggaaacgtgtttttttttgttattttggtgcagagatttttccaaaatgactgatcttaggcttggttttgtgtttctcttcagcaggttgttctctaggcctgggaactcaatctgaaacagagttgagttattgattacttgcggcaagacagctgttcttctctgatgatgggacccaatgtattctttgctttgttcaagtttatgtcttgagagcacaatagtttctgtccaaggaaaagagagaattccaggattgtgctttcgttgtgtctgtctagtaatgattccgttgcttcatttgttttatatatgtgatgtaaattgtcagtacacactgttacttttttgtattacctagtgtaaagtatataaaggaaaacactgtatgc</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0708700, RefSeq:Os06g0708700