Os06g0709000

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Revision as of 09:34, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os06g0709000| Description = NADP oxidoreductase, coenzyme F420-dependent family protein| Version = NM_001065074.1 GI:115469879 GeneID:4342026| L...")
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Gene Name

Os06g0709000

Description

NADP oxidoreductase, coenzyme F420-dependent family protein

Version

NM_001065074.1 GI:115469879 GeneID:4342026

Length

1529 bp

Definition

Oryza sativa Japonica Group Os06g0709000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:30871594..30873122

Sequence Coding Region

30871671..30872825

Expression

GEO Profiles:Os06g0709000

Genome Context

<gbrowseImage1> name=NC_008399:30871594..30873122 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:30871594..30873122 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgatgtcgtgctcttcctcctcctcctccgtgcgcctccgattgaatctagcgccctcccgccgccgaatcgccgctcccgccaacctccaggtgctccggcgcgtgggagtggcggcggcttcaatccggcttcgtgccgcccgcgccacgggaggtgatgcacggcaaccgttcgaccatgtgcctcgcggcgttgaggaggttggtgagatggaggaggacgaggagcggcggaggcggaggggtctcaagatcgccgtcgtggggtttgggaactatgggcagttcctgaccaggacgctggtgcggcaggggcacaccgtcctggcgcactcgcgctcagactactccgccgtggcggccgagctcggcgcgacgtacttcaccgacgcgcacgatctcgtcgagtgccacccggatgtggtgctcctcgtcacctccatcctctccgccgaggccgtcctccgctcgctccccgtccaccgcctccgccgcgacaccctcttcgccgacgtgctctccgtcaaggagttccccaggaacctcctcctcggcacgctcccggaggagttcgacatcatctgcacccaccctatgttcggcccggagtccgcgggcgacgggtggggcggcctccccttcgtgttcgacaaggtccgcgtcggcgactgcccggcgcgccgcgcccgcgccgaggccttcctcgacatcttcgcgcgcgagggctgccgcatggtggagatgagctgcgccgagcacgacgcgcacgccgccgagacgcagttcctcacccacaccgtcggacgaacactcgccatgctggagctccaaacaactccgatcaacaccaaggggtacgagacgctgctccgcctcgtcgacaacacctgcagcgacagcttcgacctctacaatggcctcttcatgtacaacaacaactccaccgagctcctcaaccgcctcgaatgggccatggattccgtcaagaagaggctcttcgacggcctccacgacgtgctccggcggcagctcttcgagggctcgccgccgttggactccgtctccgccgccgcagccgggtcgccgccggatgacgcaccaatcgatggcgatcttgacagcgacaacgaggaggagcaatcggagtaa</cdnaseq>

Protein Sequence

<aaseq>MAMSCSSSSSSVRLRLNLAPSRRRIAAPANLQVLRRVGVAAASI RLRAARATGGDARQPFDHVPRGVEEVGEMEEDEERRRRRGLKIAVVGFGNYGQFLTRT LVRQGHTVLAHSRSDYSAVAAELGATYFTDAHDLVECHPDVVLLVTSILSAEAVLRSL PVHRLRRDTLFADVLSVKEFPRNLLLGTLPEEFDIICTHPMFGPESAGDGWGGLPFVF DKVRVGDCPARRARAEAFLDIFAREGCRMVEMSCAEHDAHAAETQFLTHTVGRTLAML ELQTTPINTKGYETLLRLVDNTCSDSFDLYNGLFMYNNNSTELLNRLEWAMDSVKKRL FDGLHDVLRRQLFEGSPPLDSVSAAAAGSPPDDAPIDGDLDSDNEEEQSE</aaseq>

Gene Sequence

<dnaseqindica>78..1232#ggttcactctctccccatttgtaggctggcggcgcgagacaccgccgcgttggcgcgccgctcacctcgacgccgagatggcgatgtcgtgctcttcctcctcctcctccgtgcgcctccgattgaatctagcgccctcccgccgccgaatcgccgctcccgccaacctccaggtgctccggcgcgtgggagtggcggcggcttcaatccggcttcgtgccgcccgcgccacgggaggtgatgcacggcaaccgttcgaccatgtgcctcgcggcgttgaggaggttggtgagatggaggaggacgaggagcggcggaggcggaggggtctcaagatcgccgtcgtggggtttgggaactatgggcagttcctgaccaggacgctggtgcggcaggggcacaccgtcctggcgcactcgcgctcagactactccgccgtggcggccgagctcggcgcgacgtacttcaccgacgcgcacgatctcgtcgagtgccacccggatgtggtgctcctcgtcacctccatcctctccgccgaggccgtcctccgctcgctccccgtccaccgcctccgccgcgacaccctcttcgccgacgtgctctccgtcaaggagttccccaggaacctcctcctcggcacgctcccggaggagttcgacatcatctgcacccaccctatgttcggcccggagtccgcgggcgacgggtggggcggcctccccttcgtgttcgacaaggtccgcgtcggcgactgcccggcgcgccgcgcccgcgccgaggccttcctcgacatcttcgcgcgcgagggctgccgcatggtggagatgagctgcgccgagcacgacgcgcacgccgccgagacgcagttcctcacccacaccgtcggacgaacactcgccatgctggagctccaaacaactccgatcaacaccaaggggtacgagacgctgctccgcctcgtcgacaacacctgcagcgacagcttcgacctctacaatggcctcttcatgtacaacaacaactccaccgagctcctcaaccgcctcgaatgggccatggattccgtcaagaagaggctcttcgacggcctccacgacgtgctccggcggcagctcttcgagggctcgccgccgttggactccgtctccgccgccgcagccgggtcgccgccggatgacgcaccaatcgatggcgatcttgacagcgacaacgaggaggagcaatcggagtaaatcggtgatcgtggtgtcacgctaactctgacgtcgatctcctgtgaagtcgtggccatggtcccttctcgggtcatttgcaagattcagaagttgctccccactatgaacatcaaatcgcaaatttggcttccttttcacctttcctcgcttcaatttactaccctgttcattcaaactccatgctaaatactccatacaataaaatacttgtattacatcgcgggtcgaatctatacatttttatcttaattttgcgaaatttcgtcgatttgaatacgaatttgtttgattctg</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0709000, RefSeq:Os06g0709000