Os06g0710800

From RiceWiki
Revision as of 09:34, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os06g0710800| Description = Protein prenyltransferase domain containing protein| Version = NM_001188062.1 GI:297725254 GeneID:9268482| Length = ...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os06g0710800

Description

Protein prenyltransferase domain containing protein

Version

NM_001188062.1 GI:297725254 GeneID:9268482

Length

3037 bp

Definition

Oryza sativa Japonica Group Os06g0710800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:30936825..30939861

Sequence Coding Region

30936825..30937961,30938535..30938687,30938807..30938876,30939163..30939281

Expression

GEO Profiles:Os06g0710800

Genome Context

<gbrowseImage1> name=NC_008399:30936825..30939861 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:30936825..30939861 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggatgcatactacctcgtccgcctccatctccctccaccactccagcttccacccaccctgcctctacctcgaggccgccatgaccgccgcgtcggtggcgccgtcgcgtgccgcgccaccgccggcccagtgggcagccaagagcggccgtgggagtcctacgaccgcggcattcagcaccacgcaggctccgacctcgcctcctccctccgcctgctcgccgacatgcaggccgccgggctgcgccccagcggcgcggcgtacgcgcgcctcatccgggcgctcgcccgcgccggccggacgctcgaggccgaggcgctcctcctcgagatgcgccgcctcgggctccgcccggacgccgcgcactacaacgccctcctcgaggggctcctctccacggcgcacctccgcctcgccgaccgcctcctcctccagatggccgacgacggcgtcgcgcggaaccggcgcacgtacatgctgctgctgaacgcgtacgcccgggccggccgcctcgaggactcgtggtgggttctcggcgagatgaagcgccggggtattcggcttgacaccgccgggtacagcacgctggtgcggctgtacagggacaatggcatgtggaagaaggccaccgacctcatcatggagatgcaggagctcggggtggagctcgatgtcaagatttacaacgggttgatcgatacattcggcaagtatgggcagttagcggatgcacgcaaggtgttcgacaaaatgtgcgcagaaggggtcaagcctgatattactacatggaattctttgattcggtggcattgtcgtgtggggaatacgaaacgtgctctgcgattcttcgctgcaatgcaggaggaaggaatgtatccggatcctaaaatctttgttacaatcatcagcaggttgggggaacaggggaagtgggacgaaattaagaagctgtttcatggcatgaggaatcgagggctcaaggagagtggtgcagtgtatgcagttttggttgacatttatggacaatacggccattttcgtgatgcccatgactgtgtagctgctctcaaagctgagaatctgcagctttcacctagcatcttttgtgtcttggccaatgcatatgctcaacagggtttgtgtgaacaaactgtaaatgttcttcaattgatggaggcagaaggaattgagccaaatcttgttatgctgaatttgctaataaatgcttttggtactgctggaaggcatttggaggcacttgctgtactccagcatatcaaggatagcggtatgagcccagatgttgtgacttacacaacacttatgaaggctttcatgagagcaaagaaatttgaaaaggtgtcagaagtatataaggagatggagggtgctggttgtactcctgatagaaaagctagagaaatgctgaatgacgcctctattgtactggaacaaaggggaatgttacatttgtag</cdnaseq>

Protein Sequence

<aaseq>MDAYYLVRLHLPPPLQLPPTLPLPRGRHDRRVGGAVACRATAGP VGSQERPWESYDRGIQHHAGSDLASSLRLLADMQAAGLRPSGAAYARLIRALARAGRT LEAEALLLEMRRLGLRPDAAHYNALLEGLLSTAHLRLADRLLLQMADDGVARNRRTYM LLLNAYARAGRLEDSWWVLGEMKRRGIRLDTAGYSTLVRLYRDNGMWKKATDLIMEMQ ELGVELDVKIYNGLIDTFGKYGQLADARKVFDKMCAEGVKPDITTWNSLIRWHCRVGN TKRALRFFAAMQEEGMYPDPKIFVTIISRLGEQGKWDEIKKLFHGMRNRGLKESGAVY AVLVDIYGQYGHFRDAHDCVAALKAENLQLSPSIFCVLANAYAQQGLCEQTVNVLQLM EAEGIEPNLVMLNLLINAFGTAGRHLEALAVLQHIKDSGMSPDVVTYTTLMKAFMRAK KFEKVSEVYKEMEGAGCTPDRKAREMLNDASIVLEQRGMLHL</aaseq>

Gene Sequence

<dnaseqindica>1..1137#1711..1863#1983..2052#2339..2457#atggatgcatactacctcgtccgcctccatctccctccaccactccagcttccacccaccctgcctctacctcgaggccgccatgaccgccgcgtcggtggcgccgtcgcgtgccgcgccaccgccggcccagtgggcagccaagagcggccgtgggagtcctacgaccgcggcattcagcaccacgcaggctccgacctcgcctcctccctccgcctgctcgccgacatgcaggccgccgggctgcgccccagcggcgcggcgtacgcgcgcctcatccgggcgctcgcccgcgccggccggacgctcgaggccgaggcgctcctcctcgagatgcgccgcctcgggctccgcccggacgccgcgcactacaacgccctcctcgaggggctcctctccacggcgcacctccgcctcgccgaccgcctcctcctccagatggccgacgacggcgtcgcgcggaaccggcgcacgtacatgctgctgctgaacgcgtacgcccgggccggccgcctcgaggactcgtggtgggttctcggcgagatgaagcgccggggtattcggcttgacaccgccgggtacagcacgctggtgcggctgtacagggacaatggcatgtggaagaaggccaccgacctcatcatggagatgcaggagctcggggtggagctcgatgtcaagatttacaacgggttgatcgatacattcggcaagtatgggcagttagcggatgcacgcaaggtgttcgacaaaatgtgcgcagaaggggtcaagcctgatattactacatggaattctttgattcggtggcattgtcgtgtggggaatacgaaacgtgctctgcgattcttcgctgcaatgcaggaggaaggaatgtatccggatcctaaaatctttgttacaatcatcagcaggttgggggaacaggggaagtgggacgaaattaagaagctgtttcatggcatgaggaatcgagggctcaaggagagtggtgcagtgtatgcagttttggttgacatttatggacaatacggccattttcgtgatgcccatgactgtgtagctgctctcaaagctgagaatctgcagctttcacctagcatcttttgtgtcttggccaatgcatatgctcaacaggttagtctagttactggatatagatggaatcaacttcgtctaatggcatgatagttgttattaacatctgatgcagactaacatagagtgtcaaagtgataatataactttggaaaacaacaatttgcagtcattttagtattaaatcacagttctatctctggattaaaatatccatgaataattcagtgaatcctgaccattttgtttatctgttcaatgccgtgctcattgttcatttgccacccattctgtttagttctagttaaagggggtggcaatgattatatcccacccatgtgtcacacatgggccctaaggcacatgtgttcttgcacactctagcaaggcatggcaagggtatcaagagagtcaaaaatgtggtggcattactcggtagtctctactgtagtttcaaaacgctctggaatcttcaattatcattctgccttcacagttttgttttcttttggacgaaggcttaattggtctaaaaacatcaatatctacatgtcactgtgcatacctttcagtttgtgtggcttgtgcaccatttcaactctctcttttcagggtttgtgtgaacaaactgtaaatgttcttcaattgatggaggcagaaggaattgagccaaatcttgttatgctgaatttgctaataaatgcttttggtactgctggaaggcatttggaggcacttgctgtactccagcatatcaaggatagcgtacgttctttctccagaaatgagagaagaaaagtgttttttttaatgtttcttttttgggttccatgatttaacttagtttgagcaatttctacctattgttgatttcattttttcagggtatgagcccagatgttgtgacttacacaacacttatgaaggctttcatgagagcaaagaaatttgaaaaggcatgtccactatttttctactccttagcatttagtaacttaaatatcatggattgtagcaaatcctcatcctaaatttctgttgaaattctgaatacttatttgttttgctcttcaccataactgttaaaataagtttttcctcatgtatgcaactatctcacattatattatgctattagatcatcttgatgatacaaaatattgtaacaaagctttatgaaacatggcttattaatctaaggttttaggagattgaagtaattctgattattttcctgcataggtgtcagaagtatataaggagatggagggtgctggttgtactcctgatagaaaagctagagaaatgctgaatgacgcctctattgtactggaacaaaggggaatgttacatttgtagccacccttttgaattccagggatggatgctttggcgggttatcgaaattggaatacctacaattctgaagtggctcaagcttcaatttctataacttgaagaataccatatcccttttttgcttgccatgctgaatgtctgaaacagatacgatatatagtaaacacaggtgagttttggcttgctcaggaatatatagacacttctgcagttctttttctccctcagtattgtaagatgtcactcaataaaatttctccaagcctccaattatctttttaatttgtttactgcagagtgtgccaaaaaagacagaaagcaacattatttagaaagagaaggttaggctcctttcaagaaaaagagagagagaaagttaggtcacaactttatggaacatatcaacgtttgaaatcttgtatagtttatcctacaactgtaagatgacctcttgctttaaacattgcaatagctcggctcctctattcgcttcagatttacctattactaaatttcatgggagaaaacaatgaggcatcaagccctcaatttatcttaagcatagaaataaggttctcat</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0710800, RefSeq:Os06g0710800