Os06g0711100

From RiceWiki
Revision as of 09:34, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os06g0711100| Description = Conserved hypothetical protein| Version = NM_001065084.1 GI:115469899 GeneID:4342036| Length = 4026 bp| Definition ...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os06g0711100

Description

Conserved hypothetical protein

Version

NM_001065084.1 GI:115469899 GeneID:4342036

Length

4026 bp

Definition

Oryza sativa Japonica Group Os06g0711100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:30946733..30950758

Sequence Coding Region

30946981..30947278,30947373..30947558,30947671..30947826,30948460..30948597,30948692..30948816

Expression

GEO Profiles:Os06g0711100

Genome Context

<gbrowseImage1> name=NC_008399:30946733..30950758 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:30946733..30950758 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggaggaacggcaggcggtcaacccggcctgccccaacgccgccaaccccttccaccgctgcgccgactactgccccgtccctgctcccgccgccgccaccgccaagccgcccccaccgccgccgtcttcccgaccggcgcagaacgggaccgcggcgccgcagaacgggacggccgcggcgcagaacggaatcgcggagcagaacgggagcacgcacagcgacggcgagctgcaggcgaagccgcgccgccgcgacagggccggcggatccgggggcctccccttctacgtcttcctgcgcgagggagccgacggcgacggcaagaaggtggacccgcgatgccccaacgcgcccaacccgttccacgtctgcaccgagcactgcgccgccaagatggccgaggtcagccgctcgtcggagggcgggaagtcccccatgtccctcttctcccgccactcgcgccgctcctcctcctctgaagatggcagcgtgagatcggggagcagcaagaaggtggatcctaagtgcccaaatgctggcaatccattccatgaatgcactgagcattgtgctgccaagatgaaggaggtgggtcagcagaataagactgttaagaagtcgtcctcacgcaagaaagggggaaaggagatctctgttgtgcagaactggaaggtggatccgaggtgcccaaatgcgtccaacccattccatatatgcgcccaatactgctttgatcatttgaatgaaacgggtcagaaagatacaagcaaaccagactcaaggaagggcaaagctgttgtgaaagcagagcaaacaggagaaatcaatcctgattgtgtgaatgcgtccaatccctaccacaagtgtggggaacattgtaagagaaagggtgacaggtag</cdnaseq>

Protein Sequence

<aaseq>MEERQAVNPACPNAANPFHRCADYCPVPAPAAATAKPPPPPPSS RPAQNGTAAPQNGTAAAQNGIAEQNGSTHSDGELQAKPRRRDRAGGSGGLPFYVFLRE GADGDGKKVDPRCPNAPNPFHVCTEHCAAKMAEVSRSSEGGKSPMSLFSRHSRRSSSS EDGSVRSGSSKKVDPKCPNAGNPFHECTEHCAAKMKEVGQQNKTVKKSSSRKKGGKEI SVVQNWKVDPRCPNASNPFHICAQYCFDHLNETGQKDTSKPDSRKGKAVVKAEQTGEI NPDCVNASNPYHKCGEHCKRKGDR</aaseq>

Gene Sequence

<dnaseqindica>249..546#641..826#939..1094#1728..1865#1960..2084#cccgatcgagttcccaccccagccaacgacccaaccccagcttctcctcctcctcctttcaaatcacacccttcgtcctcggaattctctgcgctgcagcaccagcatctcgcaagtcaaaccatccttatttattctggttttcttgccttgctgctgctgctgctgcggttgattttgatcttggaagaggaggaggaggaggggttgggttggtgggggtagcagcagcagcagagccgccggtgatggaggaacggcaggcggtcaacccggcctgccccaacgccgccaaccccttccaccgctgcgccgactactgccccgtccctgctcccgccgccgccaccgccaagccgcccccaccgccgccgtcttcccgaccggcgcagaacgggaccgcggcgccgcagaacgggacggccgcggcgcagaacggaatcgcggagcagaacgggagcacgcacagcgacggcgagctgcaggcgaagccgcgccgccgcgacagggccggcggatccgggggcctccccttctacgtcttccgtgagcacctcccttcctttgccccccatctcttcgcagcaactttcagaagaaagtatgagaattcgattcgatttgggttttggtgctgtagtgcgcgagggagccgacggcgacggcaagaaggtggacccgcgatgccccaacgcgcccaacccgttccacgtctgcaccgagcactgcgccgccaagatggccgaggtcagccgctcgtcggagggcgggaagtcccccatgtccctcttctcccgccactcgcgccgctcctcctcctctgaaggtttctgtctttctttgctcgattcgttacttgctactgattggtaacatcatatttgggatttgttgttctttgtattatctgtcataacaattgttggatggttgcgcagatggcagcgtgagatcggggagcagcaagaaggtggatcctaagtgcccaaatgctggcaatccattccatgaatgcactgagcattgtgctgccaagatgaaggaggtgggtcagcagaataagactgttaagaagtcgtcctcacgcaagaaaggtagcatatactagtggccttccactgctgattgtttatggtttcttagcttccccaattttgatgttagtgtagattaggggataaatggttagttgttttaaccctaaacctaactaaacatatcccttaaatgcctctaatggtacaaacaaattgatatgcactgtaaatgtagtgattggtatcatggaagcaaattggaaaaaagaaatgtgactgagttttgctggtttacgggaaaggaaaattgaagggaccaaccatgatcatgggaagatctgttcaccataatgtttcgcagttcatgtagtgcttgttggtgggaaagaagcagcaacacccttttgctttattacattattgtaataattattatgttcctccctatattaaatgcaaaattataagaaaatcttaaatgatttgttccactactttgaaagaattggatcacctacaaacaattgttggtaccataaaagggcccatgtcttaatcttgtgaatttcgaatggaatggtggcattatgataatgatgctaccaacttgcttatcctgaatatgctcaattcagattatattttgtaccttcaactgccattcttaattggttttgtttacgcctacagggggaaaggagatctctgttgtgcagaactggaaggtggatccgaggtgcccaaatgcgtccaacccattccatatatgcgcccaatactgctttgatcatttgaatgaaacgggtcagaaagatacaagcaaaccaggtacatctagttaacccaatgagttatcatggcatgtgtatatatacgagagctttggcagacattttaatgcctactatctctctgtttacagactcaaggaagggcaaagctgttgtgaaagcagagcaaacaggagaaatcaatcctgattgtgtgaatgcgtccaatccctaccacaagtgtggggaacattgtaagagaaagggtgacaggtagataaggtaatgaaaattctcttttatgttcggttatccttgcgcattgaagttatctgtacttcattggtttgatgtgtatattaactgaacatatttcacttaacatgggtggcatgttatcaagccatgatttggtacttgtaaagttcatctagctaaactttttggaccaagtaacccttcatgaaagatactagttcaataacattgtcatttagtagttatatattgtcaactagtcagattcgtttttcttgagtcacatgcatcatctagtaaaaatctgtcatctttcaacaagtttctagatttcattgtgcacaactagtaactcagctgtcatgacctagctatgggcacatcaacttacatgatcccaagaaaaccattgaagctctgtaactacttatatgtattttttaggtgctgattacaaacatgtaaggcaagacatatgacggaaaaaaagtttttcgtattagttttctttggtcaagctttgaaaaatcttatgagctgtaagcatctggtcaacatatgtttttctttcccctagccagctaatccagtgtgttgtagatctgcaatgattttgaggggaaaaaaagatattagttggatacaaaaaaattaacttgatgaacataagcagcagattttctttaatcatacaagtgatttctttttttattattttagttgacagtatctccttttgtggtcctaggctggcgatacaaggtttcctctccagatgatgatggtgaaaaaaaaagtatatcccgacaatagtcctgtaggtttcaatagaagctgtgtttccatcggctccgctttttattgtggctgcagcatcacaatctttgctgtattatcatgtactttctacacactttcttaccgccattcactcctataaaagagtcccatattctagatctagtagtataatttattccgtgaagattgtaaaaatagaagcgtgttgtttctttttttcccccttctttttgtaagataattgcctgcttatataagttataattttgtcaccaaccaagtggtccacaaaccagttttttcattcattttctttccatcactgtccatatttgttatataaaaagatataggcggatcgatgtttgttatagcagggaggttcttctgaaccaagatatgtggccattaatttcccttttgttttatcatcaatgaacaagggaaacccatcattgatatcaactctttgacaagtatggctgctctttctggttggcagggtctggttgtgaatcttctagaatggagatggagccatttggtcagaataatacagcatcatcagtattcagtactactgtacacgtcatgttacttatagatgaggaatgcctggggggcttggaattttcagactcgtcagttgtttggtttgagacgtccaattcgtgcctgaaaatgtcttttgacctgaaaaaaaaggagaattttccagtgtttgcagcatagctgatgtgcgtgatgatgtgatcgacattcaacaaaacgggtggttgcacgttctgattatatttatggttcacacgtaggcgacaaaaggacgaaaatgaggtcgctactcaaaaccttcgtgaagaaagtaggcgtcagaagtgaaaaactgcaccgaaccatacgaccaatcaaagaacctgggaaacaaaaacagaacaattgcaagttcatgtgtctgttccaagagaattgggatccgggagacaggtgatgaaattctactcatacagaatttgacgtaaatatgcaagattgtggagcggaacttgccaacttggtagaattcttcaggaggttggttgatgagttgtcttgtttgaaactttttgagttgaattgttgaacgctttaaaatagaagtaagccgtcctccttttttcatg</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0711100, RefSeq:Os06g0711100