Os02g0554900

From RiceWiki
Revision as of 19:16, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os02g0554900

Description

Similar to Protein disulfide isomerase (Fragment)

Version

NM_001053654.1 GI:115446678 GeneID:4329652

Length

4763 bp

Definition

Oryza sativa Japonica Group Os02g0554900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:21815070..21819832

Sequence Coding Region

21815445..21815639,21815967..21816079,21816509..21816626,21817053..21817169,21817304..21817441
,21817661..21817786,21818295..21818483,21819007..21819331,21819445..21819761

Expression

GEO Profiles:Os02g0554900

Genome Context

<gbrowseImage1> name=NC_008395:21815070..21819832 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:21815070..21819832 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtggccacgagccccggccacgccgccgccgccgccatggccatcaaaacctagtgccgcctcgcgcagcgcgctgcgtcgtttggatctcgacgacggccggcgccaaggcacggagggagaagaaaaccacgcgcctcttctgtgttctccggcgatggcgagctccacggcatttgcagcggcatttgcgctgctgctgctagcgtcgtcggcggcggcggagggggaggcggtgctgacgctggacgccggcaacttcacggaggtggtgggggcgcacgacttcatcgtcgtcgagttctacgccccatggtgtggccactgcaaccagcttgctccggagtacgaggcggccgccgccgccctgcgctcgcacgacccgccggtcgtcctcgccaaggtcgacgccagcgccgacctgaaccggggcctcgccggcgagcacggcgtgcagggctaccccaccatcaggatcctccgggaccgcggcgccaggtcgcacaactacgccgggccccgggacgccgccggcatcgtcgcctacctcaagaggcaggccggcccggcctccgtcgagatcgctgcctccgcctcgccgccagcggccgactccatcgccaacgacggcgtggtcgtcgtcggagttttccccgaacttagcggcagcgagttcgagagtttcatggcggtggcggagaagatgagggccgactacgatttccggcacacgacggacgccggcgtcctcccacggggtgatcggacggtgagggggcctctcgtccgcctcttcaagcccttcgacgagctcttcgttgactcgcaggattttgatagagatgcgttggagaagtttatcgagtcttctggtttccctacagtggttacctttgacactagtccggcaaaccagaaataccttctgaaatacttcgacaatgccggcaccaaagcgatgcttttcctgagcttcagtgatgacagagcagaggaattcagaactcagttccatgaagctgcaaatcaatacagcgcaaacaacataagctttctgattggtgatgtcactgcctctcagggtgctttccagtattttgggcttaaagagagtgaagtgcccctcgttttcatactagcatcgaagtcgaagtatatcaaaccaactgtggagcctgatcagatcttgccctacctgaaggaatttacagaaggaacattggcaccccatgttaaatcagaacccattccggaggttaacgatcagcctgttaagaccgttgttgctgacaatcttcgagaggtggttttcaactccggcaaaaacgttctgctcgagttctatgctccatggtgtggacattgtcagaagctggccccgatcttggaagaggttgcagtttcattgaaagatgatgaagacgtcgtcatagcaaagatggatggtactgccaacgatgtaccgtcagatttcgcggtggaggggtacccaagcatgtacttctactcgtctggggggaacctcctgccctacgacgggaggacagccgaggagatcatcgatttcatcaccaagaacaagggctccaggcctggggaagcaaccacgactgaatctgtcaaggatgaactgtga</cdnaseq>

Protein Sequence

<aaseq>MWPRAPATPPPPPWPSKPSAASRSALRRLDLDDGRRQGTEGEEN HAPLLCSPAMASSTAFAAAFALLLLASSAAAEGEAVLTLDAGNFTEVVGAHDFIVVEF YAPWCGHCNQLAPEYEAAAAALRSHDPPVVLAKVDASADLNRGLAGEHGVQGYPTIRI LRDRGARSHNYAGPRDAAGIVAYLKRQAGPASVEIAASASPPAADSIANDGVVVVGVF PELSGSEFESFMAVAEKMRADYDFRHTTDAGVLPRGDRTVRGPLVRLFKPFDELFVDS QDFDRDALEKFIESSGFPTVVTFDTSPANQKYLLKYFDNAGTKAMLFLSFSDDRAEEF RTQFHEAANQYSANNISFLIGDVTASQGAFQYFGLKESEVPLVFILASKSKYIKPTVE PDQILPYLKEFTEGTLAPHVKSEPIPEVNDQPVKTVVADNLREVVFNSGKNVLLEFYA PWCGHCQKLAPILEEVAVSLKDDEDVVIAKMDGTANDVPSDFAVEGYPSMYFYSSGGN LLPYDGRTAEEIIDFITKNKGSRPGEATTTESVKDEL</aaseq>

Gene Sequence

<dnaseqindica>4194..4388#3754..3866#3207..3324#2664..2780#2392..2529#2047..2172#1350..1538#502..826#72..388#tgctcaccaccagagttttaaaatggaaagcttgcatcaggccacgtggcgttgacaaagaaccaatcccaatgtggccacgagccccggccacgccgccgccgccgccatggccatcaaaacctagtgccgcctcgcgcagcgcgctgcgtcgtttggatctcgacgacggccggcgccaaggcacggagggagaagaaaaccacgcgcctcttctgtgttctccggcgatggcgagctccacggcatttgcagcggcatttgcgctgctgctgctagcgtcgtcggcggcggcggagggggaggcggtgctgacgctggacgccggcaacttcacggaggtggtgggggcgcacgacttcatcgtcgtcgagttctacgccccatggtacgtacattgtacaggcaaaccccattcctcgccgccggctcggcgccatggcgccttgctgattttgaccttgagctcagctgaccaaatcctcttcgccgccgccgcaggtgtggccactgcaaccagcttgctccggagtacgaggcggccgccgccgccctgcgctcgcacgacccgccggtcgtcctcgccaaggtcgacgccagcgccgacctgaaccggggcctcgccggcgagcacggcgtgcagggctaccccaccatcaggatcctccgggaccgcggcgccaggtcgcacaactacgccgggccccgggacgccgccggcatcgtcgcctacctcaagaggcaggccggcccggcctccgtcgagatcgctgcctccgcctcgccgccagcggccgactccatcgccaacgacggcgtggtcgtcgtgagtttgacctcctcttctctctgcatcagctgtttatgcttatacttacaagctaaaggctctcattggatggcctaaatagtcaaagaataagtcaaattttaaattttcaaacttaaatttaagattgattttaagatatttttaacgtaatttcttttttaatattggcttttaagtcatcaagaacatatatatatatatgaaagttttatctataaatttatttttatcccctaataagctgttttggcttattagggaaagagccaaacgatgggagactaaaatttaattttacatttgaatttttggttttttattataaatagcatttacttttttaagtacatttgattttttgttttttaattataaatagcatttacttttttatatgtatatataaaagttttactcacaaataatatttttatttacaaataaagtgattcggataaacatacaaataagcgaaacaatgacccgatgcatcagtcaaatactcttgctgatgcaggtcggagttttccccgaacttagcggcagcgagttcgagagtttcatggcggtggcggagaagatgagggccgactacgatttccggcacacgacggacgccggcgtcctcccacggggtgatcggacggtgagggggcctctcgtccgcctcttcaagcccttcgacgagctcttcgttgactcgcaggtacactagctgaaaattaatgctacagagatactctgctctgttttgatccctccaggggaggggtatctctgtattcttgtttgcttaaaatcatccaagtagttatgattcatgaaaatttctgtaaaaagttgacagcgttcgtacaaatacatataccacctctaaaaaaatgtaagatccaaactcaacttacacattgatatataaaaaacataaattcggtatatgaataatagggtagtggtagtgtccatacccgaatttatctttttttttcaaggtgcatgtcaaatttaaacttaatttctggtgaatcgataaatatcattatactttatattgccaattttttcaaaaaaatttacagctatttacaataaatttggaacaaaaatatacacgaggggatatgaatatcctccaagggattagctagtagtagctcacattttggataagaaatggacagaaatttggattgcttcttgtttttatttttcaggattttgatagagatgcgttggagaagtttatcgagtcttctggtttccctacagtggttacctttgacactagtccggcaaaccagaaataccttctgaaatacttcgacaatgccggcaccaaagtaaggacagacaattggttgacttctcactctgtttgcctacactggactgtttagcttgttgtttaggccatgattgcctcttatcatgtgcacacgattttcactgtctctcatgttttatttcaatgtgctgctggaatccataattgagaatgcaactcttgtctcacttggtctgatcatctgttctttctgaacctgattttgagcgtgcaggcgatgcttttcctgagcttcagtgatgacagagcagaggaattcagaactcagttccatgaagctgcaaatcaatacagcgcaaacaacataagctttctgattggtgatgtcactgcctctcagggtgctttccaggtaatcttttgccttcttttttccataacaatctttattagtacattgctttgccccaacatttcgtataaaaacaatgtccaagagttgaaaatgcctgctgtctgaccatttttgaatgcacaatgttccagtattttgggcttaaagagagtgaagtgcccctcgttttcatactagcatcgaagtcgaagtatatcaaaccaactgtggagcctgatcagatcttgccctacctgaaggaatttacagtaagccaatttctgaactgacgctattatcctcttcctcgtttactaattccctgatatatattctgtgggttctttaagtcgcttgcgtgatatttagtctcactattttatactagggactatgaaggttacttattattagtactacctctttttttaatttctgatgctgttaaatttttgggataagtttgaccatcgtcttattcaaaaaatttatgtaattattatttatttttattatgacttgatttatcatcaaatgttctttatgcatgatttaaatgttttcatatttgcataaaaaaatttaaataaaacgaatggtcaaacattgataaaaggttaattacgtcatacattaaaaaccggagaaagtttcgctacgtgcttagtcagtttgccttgattttctttatgcaggaaggaacattggcaccccatgttaaatcagaacccattccggaggttaacgatcagcctgttaagaccgttgttgctgacaatcttcgagaggtggttttcaactccggcaaaaacggtatgttcttggctacttgcttgaagaacttgtattaattaccactcgacctgttacagaatgcaagatgttttggtttttgttacaagcaattttttttcaagtttaaccgagtacatagaaaatgtagcaacatttataacaccacattaatttcattaaatctagcgttgaatatatttttgtaatatatttttttagtgctgaaaatgatgttacgtttttcttaaacctggtcaaactttgacttggataaaatcaaaacaccttatattaaagtggaggaggtagatatttgtttaagttatgccctgcatgcctgatgcctgcttcgtcgtcaacatcttaaccattttgttaatttgtttgctcaagctgtcaaaacataagttcggtctctgttttttttttttcaaattccttttgcagttctgctcgagttctatgctccatggtgtggacattgtcagaagctggccccgatcttggaagaggttgcagtttcattgaaagatgatgaagacgtcgtcatagcaaagatggtaatctaccctacctatgagctctctccattgcttggtccatgctggccttgtcaaagatatgattgaaaaatgccttcatagcatgcatccataaaccatctgatctatttatttcttaaaaaaacaaaacaaaacaatcagactgattcattttattttttttagaaaaaaagcaaccatcaaattcacatgtcatgcctggggaaaaaaaagactcaagtttgacattttttttgcctcaaattcaacaaaccagattattatcagaacacgcgcgtttctcaccgttcacctcttgaccaattcgtttgccctgaattgcaggatggtactgccaacgatgtaccgtcagatttcgcggtggaggggtacccaagcatgtacttctactcgtctggggggaacctcctgccctacgacgggaggacagccgaggagatcatcgatttcatcaccaagaacaagggctccaggcctggggaagcaaccacgactgaatctgtcaaggatgaactgtgatggccacttggtcagtgattcagcgactccaagttttttttttttgtttctttaccaaaagagagctgcattttgcaaaacactgatttattcaggatgaattgcaatctaaaatcatctttgtattattttttgtagggggagtggggagcttcaggttaggaggtgcagtgcagctgacagcttgaggacatagctcagtactgaatttaatcttgtattcgagttccaggtttccaagtacatgtagcattaccaatggtttcatacatacatgtccccccccttttttttttttgcaccgctgaaatctgttattgtaacatcattacactacatcgaataatccccattttagcttgccaaacgagtaac</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0554900, RefSeq:Os02g0554900