Os02g0562700

From RiceWiki
Revision as of 19:17, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os02g0562700

Description

Similar to Gamma hydroxybutyrate dehydrogenase (EC 1.1.1.61)

Version

NM_001053689.1 GI:115446748 GeneID:4329690

Length

4277 bp

Definition

Oryza sativa Japonica Group Os02g0562700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:22202150..22206426

Sequence Coding Region

22202255..22202359,22202451..22202561,22202653..22202754,22204701..22204802,22205369..22205484
,22205648..22205726,22205815..22205985,22206085..22206180

Expression

GEO Profiles:Os02g0562700

Genome Context

<gbrowseImage1> name=NC_008395:22202150..22206426 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:22202150..22206426 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggaggtggggttcctggggctgggcatcatggggaaggcaatggcggccaacctcctccgccacggcttccgcgtcaccgtctggaaccggactctctccaagtgccaggagctcgtcgcgctgggcgccgccgtgggggagacgccggcggccgtcgtcgccaagtgcagatacaccatcgccatgctctccgaccccagcgccgcgctatctgttgtattcgacaaggacggcgtgctcgagcagattggggaagggaagggttatgtggacatgtccactgttgatgccgccacttcttgcaagataagcgaggctataaaacaaaaaggtggggcttttgttgaagctccagtttcaggaagcaaaaagccagctgaagatggccaattggtcattcttgctgcaggggacaaggtattgtatgatgatatggtccctgcatttgatgtacttgggaaaaagtcgttctttttgggagagattggaaatggagcaaagatgaaactggtggtcaacatgatcatgggaagtatgatgaatgctttgtctgagggactctctctggctgataacagtggtttgagcccccagacacttcttgatgtcctggaccttggcgccatcgcgaatccaatgttcaagctgaaagggccctcgatgctgcaaggcagctacaaccctgcatttcccctgaaacaccagcagaaggatatgaggttggcacttgccctaggagacgagaacgctgtctccatgccagtggcagctgcttccaacgaggcgttcaagaaagcaagaagcttgggactaggggacctggatttctcagcggtttacgaggtactgaagggcgcaggtggctcaggcaaggcgtga</cdnaseq>

Protein Sequence

<aaseq>MEVGFLGLGIMGKAMAANLLRHGFRVTVWNRTLSKCQELVALGA AVGETPAAVVAKCRYTIAMLSDPSAALSVVFDKDGVLEQIGEGKGYVDMSTVDAATSC KISEAIKQKGGAFVEAPVSGSKKPAEDGQLVILAAGDKVLYDDMVPAFDVLGKKSFFL GEIGNGAKMKLVVNMIMGSMMNALSEGLSLADNSGLSPQTLLDVLDLGAIANPMFKLK GPSMLQGSYNPAFPLKHQQKDMRLALALGDENAVSMPVAAASNEAFKKARSLGLGDLD FSAVYEVLKGAGGSGKA</aaseq>

Gene Sequence

<dnaseqindica>106..210#302..412#504..605#2552..2653#3220..3335#3499..3577#3666..3836#3936..4031#gaggaagaacactgggggagaagaacacaagtgtgcagcgtgcgtgtgtggaggcgagaggaggaagacgaaggcgaggagggaggaggtagctgcgcgcgggcgatggaggtggggttcctggggctgggcatcatggggaaggcaatggcggccaacctcctccgccacggcttccgcgtcaccgtctggaaccggactctctccaaggttttctttccatccatccttcctcctccgcagattggtgatgagtttattcgagtaatccgatgtccctgacgcgtgtttgagtgcgcagtgccaggagctcgtcgcgctgggcgccgccgtgggggagacgccggcggccgtcgtcgccaagtgcagatacaccatcgccatgctctccgaccccagcgccgcgctatctgttaagccctagcccctgcttccttagtgtttgcaagatggcgtcctccctgatttttttttgtttttttttgggggctaaattcatctaggttgtattcgacaaggacggcgtgctcgagcagattggggaagggaagggttatgtggacatgtccactgttgatgccgccacttcttgcaagataagcgaggtatacatttctcctccctgatggctttgccttgccctgcccccattatttttatttcaattcatgtatgtatgagtgatgagttattaatcgtgtattagtaattagtttggtggttcttgttgcctccgtgcaatttcttgagtgcgattggccagttacatcttcacaatcctgcaagtttgactgtctgagtaccttacctaatttcacattattagatcctgcaatatatgttgctcgcaagcatattccttgatatcgatgaccctgttagtgtacagtttccatcctggtttgcaaagatattcaactgaacaccaccatgacaatttgtcttgcatccatgtattcctgtgtgtagatatggacctaagaggttggcatttcccttttttttcactatcttgccacatcatgtacgacaataccttctgtagtgctcactcgttttgcttttgtaagttgttctaaaacagacaattattctctactataaatcattgcaaaagcgcagagcttctagccttgtaggcattttcgtgttttcttatgtccttactaatttaatgctgccattctcattaatgagagccattttgtccccttgattgaatggcaacaagttattttgtatacctcatcctagttacactgccaagcacagaatgaattatatcgtaatccgagggaatattccatgaaaacatgtgaatacttaacagaagtggacgatggaggaagagaacatatttttaatcgtttgcagttagaaagaaggaagaataatgacaagccaaatatcatatctatctctttggccgtctgtatgcaattggctaccagggtttgatttatgtcaccaaatatgaacaaattgagccactttcttgctccccagaaaacagtattgcatgaatcataacacagcatggccacttggtgaataatgggctcctgagtatgtgcaaatgaggccatttttaacattcagccttctcatcttggtagagcaaagaagccattcccatacaaaactgtcggcaatatttttaaaatactaccggtgacctcactaagataacatggaacccagtactagactgcatacttgtagttcacaattaataacctaacaagggtcaacatctatcaaggagtattgtagattgtcaggttaatattaaagttcaaactttacatactcaacagctaatttaatttgctaaacattcggcgctttgattttttttatttgtttaaatagtaaggaaagccctactttaaatattggaaatcgttaatgcatcaccgcatatcataagaggtgattttgtttatgaacacaattccattttgtttatgcatgctatttgcttttttttttctgcattaatgcacttgtggtcacagtatgatccaatcttattcaccgatgtataaaaatccaccagtaatagtggcataacattctgaatggtggtcaaccgctcatgtattgtgccttttatgttttgtctgatgactacatgcatggtagtatgagtataacacggcacatttatagatatgccacttcatcatagatttccattcaatcagaacctcacatgattatgacataaggactccagcataccgcacatatgtgaccattgaactagtatgtgcttgtgcagtaagtttgagactaattcagtactgttgacagtatcaactgatcaagtcaacatatttgcatatttctgagttttcaacatcaagcaaacagccaaaagaaagcattagcatcatagcatggaagttcagcacatttttaattccactggattgctgtggtggtgtcttttatttatatttgttttcatcagcatgaccgaattgagtgtgctctataactaccaaggtatgtttataatcgatttcccttaaatacatgtttgcaggctataaaacaaaaaggtggggcttttgttgaagctccagtttcaggaagcaaaaagccagctgaagatggccaattggtcattcttgctgcaggggacaaggtaattccatatgctatgatgattgtttgcaattactactgtaaactagtggtatcggtgacacttcgcaaaaacagtctttctttttctaggtataaatgattgtaccatattttggtcctctgcttgttagtttttggtataagtgatgcatccggttgagttcttttgatgattatggcctaatgatcataaaccttttgtgattatatttacaaaatttatagtgcccataatggcttttagtttatatatgggtctaccactgtggcaattttatcttttttctgcaaacgacaaaatgtgtcggtgtatattattattgttttgcagcatttgcctgaagtccaaagaaatactcagcttatataggctggatttggtttagatgttagcatctaataagtcacgacatggattgatgatccgaatctgatacttaaacctgtcaagtgtcgactatgccagttttcaacaattttaaccagcaagatacaaatcactactgctttagtgctatgtcatagatctgttccgcatttgatgtaattatactgctgctacaggtattgtatgatgatatggtccctgcatttgatgtacttgggaaaaagtcgttctttttgggagagattggaaatggagcaaagatgaaactggtggtcaacatgatcatgggaaggtgactatctattaattatttataaacatctgctgcagtatgatgaatgcaagctccctattgttagcacatgcacatatctcctgtatctttctggactgtcattcatttactgccgttttttcctctcataaaatacaagtaatgttgtttcttactgcagtatgatgaatgctttgtctgagggactctctctggctgataacagtggtttgagcccccagacacttcttgatgtcctggtatggcacatggttaatttcattctaccggagccacctccttcacaattgagcatcaaataacaccgagtaaatcattgtctttcaggaccttggcgccatcgcgaatccaatgttcaagctgaaagggccctcgatgctgcaaggcagctacaaccctgcatttcccctgaaacaccagcagaaggatatgaggttggcacttgccctaggagacgagaacgctgtctccatgccagtggcagctgcttccaacgaggtgcgacgcctttcttcccccttttcaccgcaacctgtgaaagctgaaaacacagcaactgattgcttgaactcatcactgtggtttgctgaatcgcaggcgttcaagaaagcaagaagcttgggactaggggacctggatttctcagcggtttacgaggtactgaagggcgcaggtggctcaggcaaggcgtgaaactctgaacgctagaatccattcttcagaatctgcccattgccgtgcaggtttgctacagtgatcggcatcgaaccacgcagcatatgtcatcgtattgatactactgggtaaccagtgtgaacgatgtagttgcaggttaagtactacagcttgcgtgaacttcatcccaataataaagatatatatagctctgttatgcgatgcaactgtgtagtcacccaggttaagtacgttttttagtgc</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0562700, RefSeq:Os02g0562700