Os02g0567100

From RiceWiki
Revision as of 19:17, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os02g0567100

Description

Thioredoxin domain 2 containing protein

Version

NM_001053712.1 GI:115446794 GeneID:4329715

Length

3075 bp

Definition

Oryza sativa Japonica Group Os02g0567100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:22421346..22424420

Sequence Coding Region

22421595..22421622,22423520..22423641,22423770..22423823,22423980..22424420

Expression

GEO Profiles:Os02g0567100

Genome Context

<gbrowseImage1> name=NC_008395:22421346..22424420 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:22421346..22424420 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgatcaccgcctccctcctccccctccccgcgacttcctcctcctccggccgccgctccctcccgccgccgaccaccaccttcccgagacctcctcctcccctccgccgccaccgccacctctcctcctcctcctcctccgcgtcgtccacggagagcgacggcggcggcgggagcacgaacgggtcgctgccggggctcccccccgtggtcgtcgaggaggaggaggaggagttctgcccggtggagtgcgtgacggagttcaagacggaggaggagctggcccgcgtcctggagcgcgccaaggcgacgggggcgctggtggtggtggacttcttccgcccgtcctgcggcagctgcaagtacatcgagcaaggcttcatgaagctctgcaagggctccggcgaccacggctcctccgtcgtcttcctcaagcacaacgtcatcgacgagtacgacgagcagtcagaggtggcagaccggcttcgcatcaaggtggtgccgctgttccatttctacaagaacggggtgctgctggaggcgttcgcgacgcgggacaaggagaggatcatcgccgccatccagaagtacaccgctccatcgtcgccgcctgctgaatcagaggagccatcacaggagggatga</cdnaseq>

Protein Sequence

<aaseq>MITASLLPLPATSSSSGRRSLPPPTTTFPRPPPPLRRHRHLSSS SSSASSTESDGGGGSTNGSLPGLPPVVVEEEEEEFCPVECVTEFKTEEELARVLERAK ATGALVVVDFFRPSCGSCKYIEQGFMKLCKGSGDHGSSVVFLKHNVIDEYDEQSEVAD RLRIKVVPLFHFYKNGVLLEAFATRDKERIIAAIQKYTAPSSPPAESEEPSQEG</aaseq>

Gene Sequence

<dnaseqindica>2799..2826#780..901#598..651#1..441#atgatcaccgcctccctcctccccctccccgcgacttcctcctcctccggccgccgctccctcccgccgccgaccaccaccttcccgagacctcctcctcccctccgccgccaccgccacctctcctcctcctcctcctccgcgtcgtccacggagagcgacggcggcggcgggagcacgaacgggtcgctgccggggctcccccccgtggtcgtcgaggaggaggaggaggagttctgcccggtggagtgcgtgacggagttcaagacggaggaggagctggcccgcgtcctggagcgcgccaaggcgacgggggcgctggtggtggtggacttcttccgcccgtcctgcggcagctgcaagtacatcgagcaaggcttcatgaagctctgcaagggctccggcgaccacggctcctccgtcgtcttcctcaagcacaacgtacgttagttaattaagccattcctgattaacccctcacccccgcgccgccattgctgtggcaagcttgtcgatcggctaattcgttggacaaaaagccagaaaattctgaatctgaatctgaatctgaataccggacgatgcgaatgcatgcaggtcatcgacgagtacgacgagcagtcagaggtggcagaccggcttcgcatcaaggtaaccgatcaaataatcatatctgactggaacaatcgatcgatcgatcgagtgagttcttgctgtggtggatcgatctgatcattgcgcaaatggtttgtgagttgatccgttgagcatgtacgcaggtggtgccgctgttccatttctacaagaacggggtgctgctggaggcgttcgcgacgcgggacaaggagaggatcatcgccgccatccagaagtacaccgctccatcgtcgccgcctgctgagtaagctagctaccatcaaatgttgttccatcaaatggtagaatcagtgtcaacgatccctgcttaattagtaaattcttgtctggcttcatacatgtacataaataagccgtaacgcttactagcaaccaaaaaaaaactctataagtatttttatatatacatatttgttcttagcaacgtaggttttgtttggcacagctccaggtcttacatctacgacaaatttaacgcttgtatataatatattgggtaaatagctaatacagtctctgaagtttcgcttcgagctcagtttagtcctcgaggtttcaaatcgtccaaacaagtcatccaaattaatcatttgggttaatatggtccttggactcacaaaaagtgccacgtgagtatgctaaggctgtgttcggcactccttgctcccaaccaatctccctcgttttccgcacgcatgcttttcaaactactaaacgatgcatttttttgtaaaaagtttctatacgaaagttgtttaaaaaatcaaattaattcatttttgaaaaaaaactaatacttaattaatcacgcgctaatggattgctctgttttccgtgcggaggagatgggttcccaaccctacgttacgaatatagcctaagtcatcatcgcatgcagtggtatgaatgaaatgatcattctacccttatatactatatagaaaagaaataaaaaaagaagatgaatggttcacacgtgtatgatcgttttagaattgtcacttacgattgctgtagccaagcactgatcgtataaattcctttgttggccatccatccgcaacaatgctgggcttgggctggcctgttattttttctgtttgtcttttttttcttttctatatggtatatatggggtagaatatgatcatttcattcataccgctgcatgcgaggatgacttggtatactcaggtggcatttttttggtccaaggactatattaacccaaatggttaatttggaggacttgtttggacgacttgaaacatcgaggactaaactgagcccgaagcgaaacttcagggctgtattggctattcacataatataaaattggaaaaattggttatatagcatcaaaagttcacgtttttggttttatagcaccgaaagataccggttcactttaataacacccaaagttcaccatgttcccatttttagcacttccgtcaattctcgatctttttcgtccgtcttgatctagccacacacacgatatgacgtttctacccctcacaagtacaagtagaatgcatgtcaatgaggggtagaaacgtcatatcgtgtgcgtagttgggtcaataacgatcaagacggacggaaaaattgacggaagtgctaaaaatgggaacaatgtaaactttgggtgctattaaagtgaaccggtatctttcggagctataaaaccaaaaacgtgaactttcgatgctatataacaaattttgcctataaaattgtagtggttaaaattttaaaatttaatctaaaatgagaataaaatgatttattcaaatgttatcaatgtaatcgtatatctagattaatggattcgtgaagatagaaacacacagctttaagaaatcataaataataaaagctaatgctgtaaatttaaaattcaaactagtaatatgaatttgaatttcgcctgcggcagacaagctggagggcaaagtggcaaacgatggagctgataattccgcctgcaccgtaaaagctaactttctaacagtgtgtttacatgatttaccatataatgaaaaccagtccattatctaaaaaaaatataatgaaaaccagtaaacatgaattaatttggactttgctttgatggcgctatccgtttcacattgcagatcagaggagccatcacaggagggatgattccacacagggttgagttgcgtgtcatgatctgaactcaaagtattagcgatctcactacaacgaagaaattggcattctatataggccagtgtatcattaaattgttcagcacaaagaggatgccgctatagttatagacttatagttaacactgctgcatcttttgtgctacagcacaattgtaccattcctacggggtgtacatttcccccttaataataataataaagaaaagaaaaacttagc</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0567100, RefSeq:Os02g0567100