Os06g0712900

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Revision as of 09:34, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os06g0712900| Description = Dihydrouridine synthase, DuS family protein| Version = NM_001065097.1 GI:115469925 GeneID:4342049| Length = 2089 bp|...")
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Gene Name

Os06g0712900

Description

Dihydrouridine synthase, DuS family protein

Version

NM_001065097.1 GI:115469925 GeneID:4342049

Length

2089 bp

Definition

Oryza sativa Japonica Group Os06g0712900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:31064152..31066240

Sequence Coding Region

31064414..31065155,31065355..31065461,31065807..31066223

Expression

GEO Profiles:Os06g0712900

Genome Context

<gbrowseImage1> name=NC_008399:31064152..31066240 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:31064152..31066240 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcgattcgctcccatcctccggaacccgcgccgccgccgcctcctccgctccgtaaaccctagcctcgccgccatgtcgccgccggccgccgcccacctcgccaccgcctccgatcccgacgaggacctctgcttcaccaccgaatcggtcgcgcccgcggaggagaccgccccgcccttgcccgcccctccgccgccggtgtccgcggaggagagggtggagcgcgcgtgggcgcactggaggcggctgggctccccgaagatggtggtggcgcccatggtggacaactcggagctccccttccgcatgctgtgccgccgctacggggcgaccggggcatacacgcccatgctccactcccgcatcttctccgagaacgagaagcacagggccatggagttcaccacatgcaaggaggaccgtccactttttgttcagttttgtgcaaatgatcctgacattttgttacaagcagcaaagattgtggaaccgtactgcgactatgtcgatatcaattttggatgcccacagcgcattgctagaagggggtactatggtgcgtttctcatgaacaaccttcctctcgtaaaatcccttgtacagaatctatcagcaaacctccatgttccagtatcatgcaagattcgcatattcccgcgactggaggacacactggcctacgcaaagatgcttgaagaagctggtgcttctctggtagctgtgcatgggcggactagagatgagaaggatgggaagaaatttcgagctgactgggatgccattaaagctgtcaaagatgctcttaggatacctgtacttgcaaatggaaacattcgccatttggatgatgtgaaggattgccttgaacatactggtgctgatggtgtgctttcagctgaaactcttctagaaaatccagcattgtttgctggtttccggacaaaggaatggaaagaaaatggtgatgaagatgaagctagtggcttagaccaggctgatctagtcattgagtatttgaaactgtgcgagcagtaccctgttccatggagaatggttcgatcccatgttcacaagatgctaggggactggtttagggtgcatcctcaagtgagggaggaactcaatgctcagtccaagctcactttcgagtggttgcatgatatggtaaagaggctgaaggatcttggtggaggaataccgctttacagaaacaataatgctttacagactacatcaaatgggctagctgcaagcaacgcctga</cdnaseq>

Protein Sequence

<aaseq>MRFAPILRNPRRRRLLRSVNPSLAAMSPPAAAHLATASDPDEDL CFTTESVAPAEETAPPLPAPPPPVSAEERVERAWAHWRRLGSPKMVVAPMVDNSELPF RMLCRRYGATGAYTPMLHSRIFSENEKHRAMEFTTCKEDRPLFVQFCANDPDILLQAA KIVEPYCDYVDINFGCPQRIARRGYYGAFLMNNLPLVKSLVQNLSANLHVPVSCKIRI FPRLEDTLAYAKMLEEAGASLVAVHGRTRDEKDGKKFRADWDAIKAVKDALRIPVLAN GNIRHLDDVKDCLEHTGADGVLSAETLLENPALFAGFRTKEWKENGDEDEASGLDQAD LVIEYLKLCEQYPVPWRMVRSHVHKMLGDWFRVHPQVREELNAQSKLTFEWLHDMVKR LKDLGGGIPLYRNNNALQTTSNGLAASNA</aaseq>

Gene Sequence

<dnaseqindica>1086..1827#780..886#18..434#agaggcaaatcactagcatgcgattcgctcccatcctccggaacccgcgccgccgccgcctcctccgctccgtaaaccctagcctcgccgccatgtcgccgccggccgccgcccacctcgccaccgcctccgatcccgacgaggacctctgcttcaccaccgaatcggtcgcgcccgcggaggagaccgccccgcccttgcccgcccctccgccgccggtgtccgcggaggagagggtggagcgcgcgtgggcgcactggaggcggctgggctccccgaagatggtggtggcgcccatggtggacaactcggagctccccttccgcatgctgtgccgccgctacggggcgaccggggcatacacgcccatgctccactcccgcatcttctccgagaacgagaagcacagggccatggagttcaccacatgcaaggtaaattctccttgatggttggtttatacgatttcttttctattcaattcttggatccttcaattagagcgcccggagtagtttaagctaattcttcactggagtaataattttgatgatgctttgataattcgtagttaccgagaaaattccgagcgatacatctgtcatatcactacacaaaggattagatagtagtttgataattagcttttattttagatagtagtttgataattactagcttttattgtcctgttacctctgtaatccattaatcgttctttgtattggttatggaacatactgaaaatagaatgtgacaattggtggtatgttatacaggaggaccgtccactttttgttcagttttgtgcaaatgatcctgacattttgttacaagcagcaaagattgtggaaccgtactgcgactatgtcgatatcaattttgggtaatgttgtattccctactctatgctgaaaatttcctctgctctgacttatttggcattttactgtttagtagatctcccccttttctgctcagttaattgaaatgtcagttcccccgataaataagcattacttcataccatgttttgttctggatgctcttctaaatggcgataccacctctctgaaatcttgcagatgcccacagcgcattgctagaagggggtactatggtgcgtttctcatgaacaaccttcctctcgtaaaatcccttgtacagaatctatcagcaaacctccatgttccagtatcatgcaagattcgcatattcccgcgactggaggacacactggcctacgcaaagatgcttgaagaagctggtgcttctctggtagctgtgcatgggcggactagagatgagaaggatgggaagaaatttcgagctgactgggatgccattaaagctgtcaaagatgctcttaggatacctgtacttgcaaatggaaacattcgccatttggatgatgtgaaggattgccttgaacatactggtgctgatggtgtgctttcagctgaaactcttctagaaaatccagcattgtttgctggtttccggacaaaggaatggaaagaaaatggtgatgaagatgaagctagtggcttagaccaggctgatctagtcattgagtatttgaaactgtgcgagcagtaccctgttccatggagaatggttcgatcccatgttcacaagatgctaggggactggtttagggtgcatcctcaagtgagggaggaactcaatgctcagtccaagctcactttcgagtggttgcatgatatggtaaagaggctgaaggatcttggtggaggaataccgctttacagaaacaataatgctttacagactacatcaaatgggctagctgcaagcaacgcctgatgatcaccttccaattttgatcattcaacatatagcttaccaatttatcaaccaagattttagcaacaaagcacttggttttaacttacatcagtatacatcgaaacatcattgttgtagtgcaacatcacatttcctgataagaaaggaagttttgagtaatcatttttacctgttgctcagttagcatgttttgagcaactactacgatcaccttattatctgtaacaactggtgtataactaattctatacttgcatgc</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0712900, RefSeq:Os06g0712900