Os06g0713400

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Revision as of 09:34, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os06g0713400| Description = Cyclin-like F-box domain containing protein| Version = NM_001065101.1 GI:115469933 GeneID:4342053| Length = 5362 bp|...")
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Gene Name

Os06g0713400

Description

Cyclin-like F-box domain containing protein

Version

NM_001065101.1 GI:115469933 GeneID:4342053

Length

5362 bp

Definition

Oryza sativa Japonica Group Os06g0713400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:31102299..31107660

Sequence Coding Region

31102435..31102746,31102854..31103015,31103096..31103989,31107009..31107185

Expression

GEO Profiles:Os06g0713400

Genome Context

<gbrowseImage1> name=NC_008399:31102299..31107660 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:31102299..31107660 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtgtcttcctgctgcagctgtgtatggactactcatgatttgttttgttttgtcacatgccttcttgcagcagcagccgcaacttatggagaacgtggcggtggccaagcggagcaggctggagcaacaccgcacgctcagtgacaactccttccgtgtggaggatctccctgaggaaattcaatctcttctattatctctgctgtcactgaaagaggctgctagtacaagcatcgtgtcgagaaactggagaaaactttggacacggtatcctaatctatgctttgatggcagcaaggacgggcctgctgatatggatagtgtgaaaatagaaagaatgaagttcattgatacagtaaattctattattcagcaacacagtggaatagggctcaataaattcagtatcaggtgcaaccttctgaaggacgactcagacattcttgataggtggattcgctttgccactgcatcaaaggctaagattatagatatgaacctgtgcacaaatagaaataataaaggaccaaccaaacatttgtatgacttccctcttgaggctttcggtgatcaagatatcccttttatccagtgcttgtttctcaacaatgtttctataaagccacactcggatattggctttacgaaactcaggagccttcatttgcactgtgttcaaataattggagatctttcaggcttgctatttaattgctccagtcttgaggacttggaggtctttgcgtgcttgggtgtgactgctctgaatattccacaccaactcaataaacttaggcatttgctaatttgtaatatgcgtatccagatgctggagtttcatgttcctggtctttctcattttgaatacaaaggtactatgattcctataatgcttcatggttgctcaaaattacagaaggcaaccctgaattttcaccagacatggcttgaagaagataataataaagtattgggccatgtattccatggaattcccagtgtttcggcagttgaggtgctcaatttacttgttgatatttgcacaaagcaatcggtctggtcctcacaggtgcatacgttgacagcaagaccaacaatcatgtttatgaatttgaagcatctgacttatgagatacttatttttactaaagatccaaacagccacagtggagttcttcagctggctcagtatttagcttttgcaccgcagctggagactctagaattgcatatgttgtatcattcgactcactgccgctgctggcatgagggtgcgggagtctcctacggacatatgccccatcatcacctcaagatggtctacatgagtgggttcaggtgctaccgggctcaggtcgagctgctgtttgccattcttgaaatgggtgatgagcttgagcatgtgaccattgatccaatgacgagagtaccgtatagccctgatttgatgaatttaggcatacctgaggacgagatatgtcaatgggcgaaccgtacctcacaacggtttggtaaagcaatctctgttgtaaaacctccctag</cdnaseq>

Protein Sequence

<aaseq>MCLPAAAVYGLLMICFVLSHAFLQQQPQLMENVAVAKRSRLEQH RTLSDNSFRVEDLPEEIQSLLLSLLSLKEAASTSIVSRNWRKLWTRYPNLCFDGSKDG PADMDSVKIERMKFIDTVNSIIQQHSGIGLNKFSIRCNLLKDDSDILDRWIRFATASK AKIIDMNLCTNRNNKGPTKHLYDFPLEAFGDQDIPFIQCLFLNNVSIKPHSDIGFTKL RSLHLHCVQIIGDLSGLLFNCSSLEDLEVFACLGVTALNIPHQLNKLRHLLICNMRIQ MLEFHVPGLSHFEYKGTMIPIMLHGCSKLQKATLNFHQTWLEEDNNKVLGHVFHGIPS VSAVEVLNLLVDICTKQSVWSSQVHTLTARPTIMFMNLKHLTYEILIFTKDPNSHSGV LQLAQYLAFAPQLETLELHMLYHSTHCRCWHEGAGVSYGHMPHHHLKMVYMSGFRCYR AQVELLFAILEMGDELEHVTIDPMTRVPYSPDLMNLGIPEDEICQWANRTSQRFGKAI SVVKPP</aaseq>

Gene Sequence

<dnaseqindica>4915..5226#4646..4807#3672..4565#476..652#ttgggagccggacagcactgggctgttgttggcctgcagctgccttctcactcccactcactgaatgattgatttctggcgagggattgattctccgttccttttgctgaggggaaaatcttggattttaggggctgttctagccttctgctgaggcctcttagttttcctgttttgttctggggcaggtggatttctgttttctggggattattgggggaaatattgttccttgtttatttcagaagtatttgcaggggtaatacgacattttttggggagtaaaataatgctttatatactctcagaaatatactgcctaaagtttttgtggacagaaccagtccaaatttttaagtagagattacttgatccctattacagaggtaaatggttccaattgaacgaattacacaagaatatagtatcccatcgaggtttggagttcaatattggtgcaaggattggttatataatgtgtcttcctgctgcagctgtgtatggactactcatgatttgttttgttttgtcacatgccttcttgcagcagcagccgcaacttatggagaacgtggcggtggccaagcggagcaggctggagcaacaccgcacgctcagtgacaactccttccgtgtggaggatctccctgaggtaatattctttttttttcctcacctgtcctcacctcccaatttggttgggttggggaatcatgatttcatctttaggagtaaaatgattattctttgatgctttctttgtcaaccccttactttttgaacctgcacacagaatgatcaagcgtgttttgatcttatatttgattttttgctttacttttctcctctcttatctgtggctatgtatgagggatggagtataaattcagttccaccatggaggtaacaatcccacttacacgcacatcagtagtacttttaaatgcctccatctgtaacccgctcctttggagactcttctgttgcaatttgtgcacacagtacagggattttcaagtttgaaaaagatggatcattcactaggaccttccaagcaagatgctggattttttcctcaataaaatatcatgtagttttatctcctcaccttttctttcttccctgcataattttatcaaaatccccaattttctcctggtctttttctactaagggcttataagccaaaaaggctaagcctaaacaaatgatgagttttttcgttgggattttaaaagccgtaagccacccttacattgttaagttaaaagctaagtacgagtagttcttttttggcttatttgaagtggaggtaggactccaccattgaacttgaggcttaaaagccaccagctgtaagccaaaaagaatcagcttaaaatcctaagccaaaacaaagatggcctaaacattagctatctctgcatggctttgcgcttgacatcagcatttgcacccatgcccttcaattcttttattgaaattcctgaccctactcttcctattttgccatatgtaatcttaatttcttatattgttttctacactcaaaattagaggcgggtcataaattgtaagtaaataatcatctagcattctctgctttgcatgccttaaatatctagcactccttaatgttgtatgtggcataacatatactccctccgtttcatattataagactttctagcattgcccatattaacatatatgaatgtgggcaatgctagaaagtcttataatatgaaacagagggagcagttaaaatgtgcttggcttcaaatcctcatcattttacctattgggatgctgcgaattccttaacaaggttgttatcttttgttctcctatattttagaatgactttactatcagaagccaacatttatgcacaccacattgttctagatagaaccttgcaaacctgatttcaaatattatttaggatgcatcagttataaacctactgcgatggaccacaattcatcaaggggtaagaaccgccaagaggatagcggtctgtgtcagctgcttaaaatggaaggagacgtagggtggggcgacgattgatggactgggaatgggacttatccttcattgcttgtgcactaattgatgcacactatccttttatagccatatgtggtttaggggtggatgtcaagttggctcggcttggttcatctcgtctcgtaggcaagctcgagccagcttgtttagctcgtgagccatgggcaagagataaaggcactcaaggtaggagatgatctcgagttcatcgatacttggaccacgggggaggagcatggaggagatgagctcgagttcggcggcacttggaccacgggggaggagcttgaaggagatgagcttgagctcgctagttgaggagacaagctcgagctcataggcacttagaacacggggaggcgttgctgctcactggtgggtagaggcgctagggtcgggtggcggtgcaggcttgaggcggcattgggagtgggcgcttgcagcatctggtagtggcacttggtcgagtggcagtgtgggcaggtggcgagtggcgatgtcggacgcttggggttgtcatatgggtgatgctgggccgagtggtggcaccgggtgctggggacaagcggctgtggttgcctttgcctgtgaggatatggtttggtgtggtgtgatggctttggtctgggctatcacgtggtatatgtggtgtggtgggctggtccctagtggattgatgggctactgttggtggtgggccatggtttgatgggttggatgtaacctgtatgctccacgcctccagctcgtttggctcgcgagctagctcgagctggctcattatctttaacgagttaaaatgccagcttggcacgttatgaaaatgcaacgagccaagtcgagccgagcaagctaacgagccatgagctttttcgtccacccataactaggttattagcagctagggcataagatcaacaaatagatcaagtagtacttactccaatcacaaatatgaacttaatctaggctcaagtcttttttttaaaaaaactttgactagctatgtttataaatataaaaggtgtccagccaatagtgcaatacatgagttgctttggagaatgaattttgctctgtatcttttctttgcttgcctgagttgcttcctcaggaccttcgatctagaaatataatcacccaattgtttgcccttttcacaaaacattatgcattcaatgtttgttactccttcaacctctttttagctttttctctccatttagttgcccatagcgtgagtttcctcctaattgtgttttagatccctgggtcaggttctgtcatgcatttgatttccaactttctagaaatagaatcacctcattgttttgattttcttcattgtattcagtgttccatcctagctaaatttggtgttagtagatgcattatttttagtatttttggttcttctgtactatctcttatctatttcgtcatcggatttgaatgtgctaggtgactgggaaaagaagaggaaaaacccattgaagtacttttctcattgtgtcctgactcaacctattgagtacttaatgattatcacgcctgtctgtttctttgatcaaaactcaaccctcatcatcctcttgttgcaggaaattcaatctcttctattatctctgctgtcactgaaagaggctgctagtacaagcatcgtgtcgagaaactggagaaaactttggacacggtatcctaatctatgctttgatggcagcaaggacgggcctgctgatatggatagtgtgaaaatagaaagaatgaagttcattgatacagtaaattctattattcagcaacacagtggaatagggctcaataaattcagtatcaggtgcaaccttctgaaggacgactcagacattcttgataggtggattcgctttgccactgcatcaaaggctaagattatagatatgaacctgtgcacaaatagaaataataaaggaccaaccaaacatttgtatgacttccctcttgaggctttcggtgatcaagatatcccttttatccagtgcttgtttctcaacaatgtttctataaagccacactcggatattggctttacgaaactcaggagccttcatttgcactgtgttcaaataattggagatctttcaggcttgctatttaattgctccagtcttgaggacttggaggtctttgcgtgcttgggtgtgactgctctgaatattccacaccaactcaataaacttaggcatttgctaatttgtaatatgcgtatccagatgctggagtttcatgttcctggtctttctcattttgaatacaaaggtactatgattcctataatgcttcatggttgctcaaaattacagaaggcaaccctgaattttcaccagacatggcttgaagaagataataataaagtattgggccatgtattccatggaattcccagtgtttcggcagttgaggtgctcaatttacttgttgatatttgcacaaagcaatcggtctggtcctcacaggtacatcctaataattatctttgctcacttagctgttcaaatggagatgcgcttcctgatttgttctggtaatgtttcaggtgcatacgttgacagcaagaccaacaatcatgtttatgaatttgaagcatctgacttatgagatacttatttttactaaagatccaaacagccacagtggagttcttcagctggctcagtatttagcttttgcaccgcagctggagactctagaattgcatgtgagtgctctcctgcctttcttgtttttgcttatgcttctttctttgttggctatgtatagattgcaatagttagtagttacatatatttttgtttcgaaaaacagatgttgtatcattcgactcactgccgctgctggcatgagggtgcgggagtctcctacggacatatgccccatcatcacctcaagatggtctacatgagtgggttcaggtgctaccgggctcaggtcgagctgctgtttgccattcttgaaatgggtgatgagcttgagcatgtgaccattgatccaatgacgagagtaccgtatagccctgatttgatgaatttaggcatacctgaggacgagatatgtcaatgggcgaaccgtacctcacaacggtttggtaaagcaatctctgttgtaaaacctccctaggtggtgttggtagtcctgtgcatatacgacttattaccacctagataagtgtttgttcagattcagtactgaaattgctgacacaggggtttctgttttgtttccatgagtaaattgttttttattttattgtttg</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0713400, RefSeq:Os06g0713400