Os06g0714000

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Revision as of 09:34, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os06g0714000| Description = Protein of unknown function UPF0183 family protein| Version = NM_001065105.1 GI:115469941 GeneID:4342057| Length = 4...")
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Gene Name

Os06g0714000

Description

Protein of unknown function UPF0183 family protein

Version

NM_001065105.1 GI:115469941 GeneID:4342057

Length

4528 bp

Definition

Oryza sativa Japonica Group Os06g0714000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:31151477..31156004

Sequence Coding Region

31151970..31152017,31152120..31152224,31152654..31152727,31152804..31152903,31153010..31153123
,31153710..31153757,31153862..31153924,31154140..31154309,31154421..31154481
,31154588..31154693,31154823..31154890,31155247..31155321,31155410..31155492
,31155691..31155856

Expression

GEO Profiles:Os06g0714000

Genome Context

<gbrowseImage1> name=NC_008399:31151477..31156004 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:31151477..31156004 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcaggcgcacagatcgccggcgatggtggggggcggcggcgcgggggccgtcgggccgccgtcgccggcgacggtgccggtgaggcggcgctgcgagggcacggccatgggggccatcacgctcgacctccgccccggcaacggcgtcgggcccttcaccctcgggatgccgatttccgatgcgttcgcgcagatagagggccagccaacactctacgacgttgtccacgtgaagtacttcgatgaggagcctctaaagttggattttgtcataagctttcctgaccatgggttccacctgcgcttcgatccttggtcacagaggcttcgtctcattgagatctatgacgtgaaaagactgcaactgcgatatgcaaagtccttaattggtggcccatcaacattagccacttttgtggctgtttatggattattcggacctactttcccgggtatatatgacaaagagaggggcatttacaccctcttctatccagggttatcctttgcattccctatccccagtcaatatacaaatttgtttaccaatggggaagtggcagatttgcctctggaatttcctgacggaacaactcctgttacttgccgggtttctatatatgacagttcaacggatagcaaggttggggttggatcactgatggataaagcagttgttcctgcattacctgcaggcagcctgtacatggaggaagtgcatgcaaagcttggtgaagagcttttgttcacgataggcgggcaacatattcctttcggtgcatcaccgcaggacgtgtggactgagttgggtcgtccatgtggcatccaccagaagcaggttgaccagatggtaatacattcagcatcagacccccgccctcggacaactctttgtggggattatttttacaactacttctctcgtggtattgatatcttatttgatgggcagacacacaggataaagaagtttgttttacacacaaacttccctggtcattcagatttcaattcctatatgaagtgtaactttgttatctatgatgccgaagctgaagggacagatcagcctggtagtatccctaagagttgcataacgcctcgcacaaagtgggaacaagtcaaggagatccttggtgattgtggtcgagcagcaatccagacgcaaggctccatgaataatccatttgggtcaacttttgtctatggatatcagaatattgcttttgaggtcatgaaaaatggatatattgcaactgttaccctctttcaatcatga</cdnaseq>

Protein Sequence

<aaseq>MQAHRSPAMVGGGGAGAVGPPSPATVPVRRRCEGTAMGAITLDL RPGNGVGPFTLGMPISDAFAQIEGQPTLYDVVHVKYFDEEPLKLDFVISFPDHGFHLR FDPWSQRLRLIEIYDVKRLQLRYAKSLIGGPSTLATFVAVYGLFGPTFPGIYDKERGI YTLFYPGLSFAFPIPSQYTNLFTNGEVADLPLEFPDGTTPVTCRVSIYDSSTDSKVGV GSLMDKAVVPALPAGSLYMEEVHAKLGEELLFTIGGQHIPFGASPQDVWTELGRPCGI HQKQVDQMVIHSASDPRPRTTLCGDYFYNYFSRGIDILFDGQTHRIKKFVLHTNFPGH SDFNSYMKCNFVIYDAEAEGTDQPGSIPKSCITPRTKWEQVKEILGDCGRAAIQTQGS MNNPFGSTFVYGYQNIAFEVMKNGYIATVTLFQS</aaseq>

Gene Sequence

<dnaseqindica>3988..4035#3781..3885#3278..3351#3102..3201#2882..2995#2248..2295#2081..2143#1696..1865#1524..1584#1312..1417#1115..1182#684..758#513..595#149..314#agtcgacggagagggggagaagaagagggaggagtagacgcaagcccacgcgaaccgaatcgaatcgaatcgagaggagaggggaggagagagcgcaaggaataatccgtaatccgttcgcggcgaggaggaggaggtgggcccagcgatgcaggcgcacagatcgccggcgatggtggggggcggcggcgcgggggccgtcgggccgccgtcgccggcgacggtgccggtgaggcggcgctgcgagggcacggccatgggggccatcacgctcgacctccgccccggcaacggcgtcgggcccttcaccctcggtgagctcctcctcccccccaaccctaaccacccaccttccgccacggttgggatcgccgtcgtcgtcggttgcttgcttgtttcctctcgctttgccacggatatgtatatgcttgtgttggaagcaatcgccgggcttccattctgtggctggtgaattcttacgtgggaggtcgcgattgctgctgctgctgcagggatgccgatttccgatgcgttcgcgcagatagagggccagccaacactctacgacgttgtccacgtgaagtacttcgatgaggttcgtgatagcgtgtggctctgtttgctaccaaatgcgccgccagtaaagctcaactgattgtttgctgtcgtttctgtggcttcaggagcctctaaagttggattttgtcataagctttcctgaccatgggttccacctgcgcttcgatccttggtcacaggtaagtttgtatggtacaaacatgaaacatgtgctttgatttcctggtagtccggttacatctcaggcatcattcggctaatttgtgcctaacatgttaatacgaaaaatgtttttgtgaatatagagtactgtagtgcacctcttatgtgatcgaattgaacttggagcgatatatgtattctgattaattgtaaagtgtaatgcagatcctagagagcatgaaagtcattactctaggaaaaaaaataatctagttttagcgccaaaaagaattgctattcctgaacttgtgtggttggtgaaacatattcagcgtacttaagcaagtgataaagataatttctccccttacagaggcttcgtctcattgagatctatgacgtgaaaagactgcaactgcgatatgcaaagtccttaattgggtgaggagcttgttattcgttgagccaatatttggcatgtttactcgtttcactgaatcaccttggccatttaacccaactctctgtgctatgttattgataattttattttctccttttctctttcagtggcccatcaacattagccacttttgtggctgtttatggattattcggacctactttcccgggtatatatgacaaagagaggggcatttacaccctcttctatccagtacgtcatgacaagtagcctgccttgtgttattcttttacatttttttcctgccttttcttctcatgatcagtagggtatccatcttactcacattttcttgtaggggttatcctttgcattccctatccccagtcaatatacaaatttgtttaccaatggggaaggtacactgctgccaagttgccacatttaattattcaagcatcaatattcagttgtcctatatacttatattttctcagaatctcagctcagctccctaattgttatggcagtggcagatttgcctctggaatttcctgacggaacaactcctgttacttgccgggtttctatatatgacagttcaacggatagcaaggttggggttggatcactgatggataaagcagttgttcctgcattacctgcaggcagcctgtacatggaggaagtgcatgcaaaggtatatcaccatattatatcgataatattttcagccttagtagttgtatagaaaccaaggagatatatatacttcacaaccctcatctcttacccaggaaccttttctttaagcaaatgcacatatggaacaaaaaggaattatatttttttttggaaaatgtatctccatataatcttttggcatccctaaaaaggatattatcatgtttccagcttggtgaagagcttttgttcacgataggcgggcaacatattcctttcggtgcatcaccgcaggtagcaaattatgccgtctactctctctatctctctctgctttccccttctcaccactttgatgcgatggtcttatttatttcttgatttggcatctctggcaggacgtgtggactgagttgggtcgtccatgtggcatccaccagaagcaggtcggtttttaatctattagtgaaaccattgcaatatggattcccgtagatgttttgtagcatgtaaatatttcaatatctatttcacacaaataatatgctctaaattgagtttgttgaacatgaagtatggtattgtagtaaaatctttcatgtatttgaacttccacatttatcgtgtacttagctcctgttaacatctgaccatgctatagaacacacagatcttctctgttttaatatgctatgacatgccatgcatgcataatcatgggcacacaggcaatgagtatgtatgcccttacaagatctcagggcatcccattttcacatggcatatcttttgggtgctgggatagcataggactgttactttgttaggagacgacaatgtgttgaaattagacaacaactcactgcttcactgaagcatgtcaaaagaactcttttccaaactattgcatactgttttctgatattgtaaaaacatgatgtggcaccttgtgttcaatataaaggagtgtgctccttaattcaatctactcgctctcatctgcaaaccatattttgctctcccatctgtcaggttgaccagatggtaatacattcagcatcagacccccgccctcggacaactctttgtggggattatttttacaactacttctctcgtggtattgatatcttatttgatgggcaggtatttatattcttacactaaggatgtctgcagttcaaagggcatgtttttttcagagactcaaaatgcttgctaaccttgctctacatttattttctccttgcagacacacaggataaagaagtttgttttacacacaaacttccctggtcattcagatttcaattcctatatgaagtgtaactttgttatctatgatgccgaaggtctgaactacttgctgtagaattagtttgttgtgaagaaaccaactacatcctattaactatatgtcttgatcagctgaagggacagatcagcctggtagtatccctaagagttgcataacgcctcgcacaaagtgggaacaagtcaaggtatggtggttgacatgacttttgcactgccaagatactaattgtcttgtcttgatttaatagataggttctcaagctcagctttgctttgaactaggatttatttaatcacaagttcacaacattgtgttcatcttctgttgcaattctgttttatatctccttaacttcctaggttattttatgagagatccctttatttttgaatagtgaatgccaatttattcttccagataaacataatggccaaagttcttatgttaggaatgtcgtttctgtttatgactgctgtaaatgtatctatgctttgagttacaatgctgtttttttgttatggttcttttttttttttgaccaagtatggatgtctctttaaccttttcccttgccttgtgttaacaaaaccatctattttggttgttatattaggagatccttggtgattgtggtcgagcagcaatccagacgcaaggctccatgaataatccatttgggtcaacttttgtctatggatatcagaatattgcttttgaggtggtttttaattaatcaaataagaatagagttttccctgtgcaaactgtattgtcattactcagaagtgaaaccgtttgttctgccttcactgattaacaggtcatgaaaaatggatatattgcaactgttaccctctttcaatcatgaggtatgtatttgtccttgctgcacatagtatgcaaaatctgtaacactgagtcactgaccaacagtgaaacgggacaaaaatttcaatctcagtgctaacagctgatggtgatgcatatccagccgcatctgcattaatggttagacagtgctgctactccaaatgggactctagaaaggtatttagtcgtttttgcctgatcgaaaactgcatttttttttgtgactctgagactaattctttgttaactcattgacagtgcttggttctggccatggaatgcagccgcagcgctcagcatggataagcatcactaccttgtattcattctgtagatacaactcattgtacaggaactaattgtatcctgcaatcttacgttttgtacatatgatatttatttgttgaaacaagaattcagatataccagctgtactgcctgtttaattcgatcccagtgatgaaataatgggcgtgctttcctttccatcc</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0714000, RefSeq:Os06g0714000