Os06g0715300

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Revision as of 09:35, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os06g0715300| Description = Similar to CEL5=CELLULASE 5 (Fragment)| Version = NM_001065118.1 GI:115469967 GeneID:4342070| Length = 2609 bp| Def...")
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Gene Name

Os06g0715300

Description

Similar to CEL5=CELLULASE 5 (Fragment)

Version

NM_001065118.1 GI:115469967 GeneID:4342070

Length

2609 bp

Definition

Oryza sativa Japonica Group Os06g0715300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:31241056..31243664

Sequence Coding Region

31241259..31241588,31241735..31241901,31242023..31242167,31242283..31242717,31242799..31243082
,31243163..31243358

Expression

GEO Profiles:Os06g0715300

Genome Context

<gbrowseImage1> name=NC_008399:31241056..31243664 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:31241056..31243664 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgaactgcgtgcggtgctgctgctggctcctggtgctgatgctcatggcgctcgcgatcaccgccgccgtggtgttcgtccgctacaagaacggcgagggggtcttccccttccccggcgtgcccggcgccgtcgaccacaagtacgccgacgcgctcgccgtcgccctccagttcttccaggtccagaaatccgggaagctggtgaacaacacgatccactggagaggtgactcggcgctggacgacggcaaggaggccgggattgatctctccaaggggatgtacgacgccggcgaccacatgaagttcggattccccatggcgttcacggccaccatgctctcttggtccgtcctcgagtacggcgacgccatgcgcgccgccgaccagcgcgactccgccattgacgcgctgaattggatcatggattacctcgtcaatgcccacccctccgacgacgtcctctacatccaggtgggtgatcctaaagcagaccacaagtgctgggagcggccggagaagatgaaggagaagaggccactgaccaagatcacgcccaagtcccccggcagcgacgtggcggcggagacggcggcggccatggcggcggcgtcgctggtgtacaagacgatcaacaagacgtactcgtcgtcgctcctggaccacggcgagaggctgttcgccttcgccgacaagcaccggggatcctacacccggacgttcccggagctcagcgcgttctacaactccaccacgtaccaggacgagctcctctgggcggcgagctggctctaccacgccaccggcaaccacagctacctcgcctacgccaccggcaagaacaaggacttcgccgacctgggcaacccgagatacttcagctgggacgacaagcgcgccggaaccgaggttcttttgtcgagggtgagcttctttgcttcgcaaggatcagacgttgcacaagacgatgttcttgggatgtacaagcagactgctgatgccgtcatgtgcattctcctgccggattcagagaccgccgctttcagaacagaaggtggtttgctgtacgttgccgagtggaactcactccagcacccggtggcatcggcgttcctcgccgcggtttacagcgactacatgcagagctccgggaagacggagctgagctgcagcgggcagggcttctcgccggccgacctgcgcaaattcgccaagtcccaggcggattacttgctaggcagcaacccgatgaagattagttacctagtcgggtacggcgaccggtacccggagaaggtgcaccaccgcggcgcgtccatcccggaggacgtcgacaccggctgcgacggccacaagtggctggagacgtccaagcccaacccaaacgtcgccaccggcgcgctcgtcggcggtccgtacaagaacgacagcttcgtcgacgagcgcgacaacgtgatgcagaacgaggccaccacctacaacagcgccctcgtcgccggcttgctctccgccctcgtctccacctcctccctcgcgcgatccttgtcatga</cdnaseq>

Protein Sequence

<aaseq>MANCVRCCCWLLVLMLMALAITAAVVFVRYKNGEGVFPFPGVPG AVDHKYADALAVALQFFQVQKSGKLVNNTIHWRGDSALDDGKEAGIDLSKGMYDAGDH MKFGFPMAFTATMLSWSVLEYGDAMRAADQRDSAIDALNWIMDYLVNAHPSDDVLYIQ VGDPKADHKCWERPEKMKEKRPLTKITPKSPGSDVAAETAAAMAAASLVYKTINKTYS SSLLDHGERLFAFADKHRGSYTRTFPELSAFYNSTTYQDELLWAASWLYHATGNHSYL AYATGKNKDFADLGNPRYFSWDDKRAGTEVLLSRVSFFASQGSDVAQDDVLGMYKQTA DAVMCILLPDSETAAFRTEGGLLYVAEWNSLQHPVASAFLAAVYSDYMQSSGKTELSC SGQGFSPADLRKFAKSQADYLLGSNPMKISYLVGYGDRYPEKVHHRGASIPEDVDTGC DGHKWLETSKPNPNVATGALVGGPYKNDSFVDERDNVMQNEATTYNSALVAGLLSALV STSSLARSLS</aaseq>

Gene Sequence

<dnaseqindica>2077..2406#1764..1930#1498..1642#948..1382#583..866#307..502#ggtcgagacggtcatggcgagcctctaactccccaccaactgccgcctctcgtcgcctcgcctcgccggcgccacctccgcattccgttccgaccagccgatcggtttcttcctcgccgttgcaaccttcgagcgcgatcgatcgaggcggttgaccgccgattcgccgcgcggcgttgcattgcacgcggctttccagttgataaatcaatcatcatccccttgatcgatgcgagtggcgttcttgttcgatcgagaggaggagatcgtgatcgcgagcgatccgggcggggcggcgcgccatcgatggcgaactgcgtgcggtgctgctgctggctcctggtgctgatgctcatggcgctcgcgatcaccgccgccgtggtgttcgtccgctacaagaacggcgagggggtcttccccttccccggcgtgcccggcgccgtcgaccacaagtacgccgacgcgctcgccgtcgccctccagttcttccaggtccagaaatgtaaggaattattctcaactttgcatgcattttttttttttgcgtttgatctcgatcatggaagttcttgatcgatgaagccgggaagctggtgaacaacacgatccactggagaggtgactcggcgctggacgacggcaaggaggccgggattgatctctccaaggggatgtacgacgccggcgaccacatgaagttcggattccccatggcgttcacggccaccatgctctcttggtccgtcctcgagtacggcgacgccatgcgcgccgccgaccagcgcgactccgccattgacgcgctgaattggatcatggattacctcgtcaatgcccacccctccgacgacgtcctctacatccaggtgatcatcatcaaatgatcgaataatctttatccaattcttgggaaatcaattaatttcttctggcattctgatctccaggtgggtgatcctaaagcagaccacaagtgctgggagcggccggagaagatgaaggagaagaggccactgaccaagatcacgcccaagtcccccggcagcgacgtggcggcggagacggcggcggccatggcggcggcgtcgctggtgtacaagacgatcaacaagacgtactcgtcgtcgctcctggaccacggcgagaggctgttcgccttcgccgacaagcaccggggatcctacacccggacgttcccggagctcagcgcgttctacaactccaccacgtaccaggacgagctcctctgggcggcgagctggctctaccacgccaccggcaaccacagctacctcgcctacgccaccggcaagaacaaggacttcgccgacctgggcaacccgagatacttcagctgggacgacaagcgcgccggaaccgaggtgggtgataatgaccgtgacaccgccactgattcaactccactgttcatggcaaattttgaaatcttgggatggttatgaagtgaatttttgtggtgttttgtttgagtttcaggttcttttgtcgagggtgagcttctttgcttcgcaaggatcagacgttgcacaagacgatgttcttgggatgtacaagcagactgctgatgccgtcatgtgcattctcctgccggattcagagaccgccgctttcagaacagaaggtaaatattcacaagattcagaagcaaaaataaaaaaagcaatctcaggttcaccatttgtgtagctggtaataataataatccagtagtatttcagatagcttgcaacgatttatttcaggtggtttgctgtacgttgccgagtggaactcactccagcacccggtggcatcggcgttcctcgccgcggtttacagcgactacatgcagagctccgggaagacggagctgagctgcagcgggcagggcttctcgccggccgacctgcgcaaattcgccaagtcccaggtagtaacaagattcagaatcatccatgaaccagagttcacaattgttcagactaacatatgttcagagagaacagaaatgttcagaaatacagtacgtaacttggatgtgatcacgcactgatcagtgatctttgttcttggcaggcggattacttgctaggcagcaacccgatgaagattagttacctagtcgggtacggcgaccggtacccggagaaggtgcaccaccgcggcgcgtccatcccggaggacgtcgacaccggctgcgacggccacaagtggctggagacgtccaagcccaacccaaacgtcgccaccggcgcgctcgtcggcggtccgtacaagaacgacagcttcgtcgacgagcgcgacaacgtgatgcagaacgaggccaccacctacaacagcgccctcgtcgccggcttgctctccgccctcgtctccacctcctccctcgcgcgatccttgtcatgatctgcattgctcggattctgacggtttaccactcattagatggcatgcaaatgctggctcaaactgatgaagaaatggtagggaggatgttgtatcatggatcgaagaagtcggtgatctgtatgtgaaaagggtaattagtactgtactagtacttatacttactaacaaaaataatcattagaaactacttttgtttgttc</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0715300, RefSeq:Os06g0715300