Os06g0715400

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Revision as of 09:35, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os06g0715400| Description = contains InterPro domain(s): IPR010989| Version = NM_001065119.1 GI:115469969 GeneID:4342071| Length = 3361 bp| Def...")
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Gene Name

Os06g0715400

Description

contains InterPro domain(s): IPR010989

Version

NM_001065119.1 GI:115469969 GeneID:4342071

Length

3361 bp

Definition

Oryza sativa Japonica Group Os06g0715400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:31244353..31247713

Sequence Coding Region

31244666..31245513,31246983..31247154

Expression

GEO Profiles:Os06g0715400

Genome Context

<gbrowseImage1> name=NC_008399:31244353..31247713 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:31244353..31247713 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggagcgtgccgctgctgatcggagtggcgcggaggagggggagagcgaatggagggaggagctgcggcagcagcagtcgcaggtcgacgcactgcgggagaggctcgtggaggtcaaggtcgggatgaagtgctccgaggaggactcgaggaaggagctggatcacctctgccgcagggtgaagaccatcgccacgctgctggcctacctcaaatccaaggccaggatcatggcgataccgcacctcgcgcacacgtcctgcgggattaggcaccaggatggcgtggggtacgtcgacaggaacggggtgccactggctgattggtccaagggcggcgagtccgcttcctgcgagggtttagatgatgaaacgtcggcggatagtagtcgtgttgccgaacatggcgatgccaatgagggggatgtagatgtcgaagacattctgaagtcgatacatgtggtgaccgatgtcatggagacccttgtgaagagagtgattgttgctgaatcggaagccgctaacgagaaagagaaggtgaggatgggtctggaagagattaggaggaagaccatacaggttgagtccatgtcggccaaagttgaggaaatggagaaatttgcagtgggtacgaatggtatgctgaatgagatgaggcagagggttgaagacatggtgttggagaccactcgacaaaggcaacgtgcggctgaaaatgagcaggagcttagtcgtgtgaagcatgacttcgagtctctcagaacctatgtcggcactctcgttaatgtcagagaaactcttctttcatcagagaagcagtttgaaacaatggagaaactcttcgacaggctagttgcaagaaccaaccaacttgagagtgagaaagcacaaaaagaagccgaagtccagaaggtggtggaggagaatgtgaggctgcgtgcgatgattgataagaaggaagcgcagcttcaggcgatgagtgagcagtgcaagttcatggcgctgagccgtcccaactag</cdnaseq>

Protein Sequence

<aaseq>MERAAADRSGAEEGESEWREELRQQQSQVDALRERLVEVKVGMK CSEEDSRKELDHLCRRVKTIATLLAYLKSKARIMAIPHLAHTSCGIRHQDGVGYVDRN GVPLADWSKGGESASCEGLDDETSADSSRVAEHGDANEGDVDVEDILKSIHVVTDVME TLVKRVIVAESEAANEKEKVRMGLEEIRRKTIQVESMSAKVEEMEKFAVGTNGMLNEM RQRVEDMVLETTRQRQRAAENEQELSRVKHDFESLRTYVGTLVNVRETLLSSEKQFET MEKLFDRLVARTNQLESEKAQKEAEVQKVVEENVRLRAMIDKKEAQLQAMSEQCKFMA LSRPN</aaseq>

Gene Sequence

<dnaseqindica>314..1161#2631..2802#agtttgggttgggggaagaaaggggaaaggcgagcgactagttcgcgagacgcgacgcgagagcgcaacccaacccaacccaacccgcggcgaagaaagcgaggagcgccgccgcagcgggagttcgccgccggcgacgcgctccttgcctcctataccgaaggtacatggctccccaatatccccaccgtctcgctcgcaaatccgtctgattacgcgtttattatccggtcgaatttggggggacgaatagatccatttctagccgattttacatgcaattttaaggggggtttgaattccgtagggtttcatggagcgtgccgctgctgatcggagtggcgcggaggagggggagagcgaatggagggaggagctgcggcagcagcagtcgcaggtcgacgcactgcgggagaggctcgtggaggtcaaggtcgggatgaagtgctccgaggaggactcgaggaaggagctggatcacctctgccgcagggtgaagaccatcgccacgctgctggcctacctcaaatccaaggccaggatcatggcgataccgcacctcgcgcacacgtcctgcgggattaggcaccaggatggcgtggggtacgtcgacaggaacggggtgccactggctgattggtccaagggcggcgagtccgcttcctgcgagggtttagatgatgaaacgtcggcggatagtagtcgtgttgccgaacatggcgatgccaatgagggggatgtagatgtcgaagacattctgaagtcgatacatgtggtgaccgatgtcatggagacccttgtgaagagagtgattgttgctgaatcggaagccgctaacgagaaagagaaggtgaggatgggtctggaagagattaggaggaagaccatacaggttgagtccatgtcggccaaagttgaggaaatggagaaatttgcagtgggtacgaatggtatgctgaatgagatgaggcagagggttgaagacatggtgttggagaccactcgacaaaggcaacgtgcggctgaaaatgagcaggagcttagtcgtgtgaagcatgacttcgagtctctcagaacctatgtcggcactctcgttaatgtcagagaaactcttctttcatcagagaagcagtttgaaacaatggagaaactcttcgacaggtaacttcacaagtatcatgatatttttagtaactattatttgtatgaagtgggttgtacaggattcatttccgagtgcaaactttatattaatttttcagagctttgcaaaaatatctttcatcttcccaatcctgtcattatgtaaacactgctgctagcaaaatcatcattttagggcatgctgctgtagtttaattggacaataaatcctgcacatgcactgtaatccctattcgtcatgtaaattgatgatgctgccaacaccttcatgctaggacatgctgctgagaaaattgttaagacaacatttcatattctaatgcattttgtaaagcacgagccgcttaatgatatgctcatcagctcatgaaaccaactgctctgcaggccttgaactttccttgtgacactgcatatacactagtatcattaaaacacagcatggaaacctattttttgctggcatatatgattgacataaactatgtcacgcattcaagtgtttttcttttggtaataacgttgggctgtcattgactaggagagctctatggtttatcctcaaggcacaaagctacatctattctgttataaattagagtttacactgcatctccagaagccttcttttttgtaacaactatgacctatccccactgtgttgatcaatggtaaagagtgttttgtcagatttgttgatagttgcttttaatcatgctaaatatcattgaaatgagtcatctagagtatttaaatactttgtcaccttttgatatcatagagactattgtcagctgatatggtgttacgttagtgtagtataaatcgaatcatcaagtctaggagttggtccccaacttcacatttaactgcagaaaaattgtgtgttttgatcatgtccaaaatttcgtatggatgttcagttgtcaaaatgatgcatgcttttgtggatatagaattgactaagtctcagtatgttttctactggtttgcatttcagcacttagtccaaaacactttttcttgctgtcctctaaacatgtagttccagttccttcaccttctgatttgagtgatgcgcatcctaatgttaaggaaatgcccatgactgattaaaaacatagaaaattacattcttggctgaggggaaaatcatatgctgtgtaggctcatctttttgtctcctttttccacttgatacagatataatcatttttcatggtcttggaatcatgcagagaaggctgctgtaaaacccatgatacctcaaataagttccctaacagtcgcatatgaaactacatattcgtaaacataacatagcattgacttatagtgttccttctgttaatcgcctagataagtacgtactcatgggtgatttatgaattggtgaagcaagtggtatccaatcctttcattccaaacaatcaatttggtattaagttttgtgttcttgtgaacaggctagttgcaagaaccaaccaacttgagagtgagaaagcacaaaaagaagccgaagtccagaaggtggtggaggagaatgtgaggctgcgtgcgatgattgataagaaggaagcgcagcttcaggcgatgagtgagcagtgcaagttcatggcgctgagccgtcccaactagctggatacttcctccgtcccaaaaaaaaaggcaaaccctgggttttcgtgtccaactttaacggtccgtcttatatgaaatttttttataattcatattttcattattgttagatgataaaacatgattaatattttatgcgtgacttgtcttttttatttttttcataattttttcaaataagatggacggtcaaacgttggacacggaaaccagggtttgtttttttttggaacggagggagtacatatgacaagctgttacgcttgttcaatgatgccacttacgaattaccgtcactgcattgttgcaacaagaagaagagctccagatagatgtggcgaaacaacggatggtgccaactgctggcgagtccgttccaggcactctgattgctgctgctgcaaacaaattgtttaccttaatgtaggtgtgatgtgttgggactgtaaacctgacatctttgtattcttgtaacttggaatttgtgtaaaaaaaaaaaccagggcacatttgtccgaatccataaatcctctgaaaaatgagctgcaattcatcg</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0715400, RefSeq:Os06g0715400