Os06g0716000

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Revision as of 09:35, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os06g0716000| Description = Protein of unknown function DUF668 family protein| Version = NM_001065123.1 GI:115469977 GeneID:4342075| Length = 58...")
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Gene Name

Os06g0716000

Description

Protein of unknown function DUF668 family protein

Version

NM_001065123.1 GI:115469977 GeneID:4342075

Length

5839 bp

Definition

Oryza sativa Japonica Group Os06g0716000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:31285688..31291526

Sequence Coding Region

31285896..31286057,31287722..31288035,31288130..31288222,31288327..31288417,31288694..31288787
,31289064..31289158,31289335..31289404,31289485..31289594,31290048..31290164
,31290469..31290545,31290641..31290685,31290810..31291335

Expression

GEO Profiles:Os06g0716000

Genome Context

<gbrowseImage1> name=NC_008399:31285688..31291526 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:31285688..31291526 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggggtgcgtgtgctccaggcggtttcgggacgacgccgcgccgcgctcggtgcagccgctcgccgccgcctacgaggcgcgccggggtcgctacggccctggcgacttcgactccggcgagctcgccatcccgccgcccaagctactcacctcccacaaggtaccagaaacaggtacacttttaggaagagccagcattgctgctgtcgaggtgttagataccctcgggagtagcatgacaaatttaaatcatggcagtggatttctctctgggggaacaaatcgaggcaatagagtctgtattttagcatttgaagtcgcaaacacaatagctaaagcttccaatttgtggagatcttgctccgacacgagtataaaggaattgaaggaagaaatattgcgttcagatggagtgcaaatattggtctcctcaaattccagtgaactattgtatattgcttatgttgacaaaagggatgaacttgacatcttttcaagagaagtaattcgatttggtaacctgtgtaaagacccaacatggcataacttaggacgctatttcaacaaattaacgacagattttgcgcctcaggatcattcaaaagagcatatggaaactactatccagcaattgatcaatttggctcaaaatacttctgaactctatcatgaattgcatgcgctggacaggtttgagcaggattttcaaagaaaatttcatgaagaagagtcagtgccagcagccagacgtgagagtgttatgatcttgcatagtgaactaaagcgccagagaaagcttgtgaaaactctcaagaagaagtctttgtggtctcgaactttagagacgattgtggagaagcttgttgatattgtcgtatttttacataagcaaattcgggattcattcagtgaagctgtttctgtaggtgctgaccttttcaattcagagcaagctcaaaacaaaagactaggttcctgcggtctagccttacattatgcgaacataatcaatcaaattgaaaatattgtttctagaccactctctcttcctcctagtgctagggacaatctgtatcatggtctgccagtaacagtgaagtcagctctcagatcgcgattgcaatcagttaatgcccaagaagagcgtactgtagctcaaattaaagctgaaatgcagaaaactcttcgctggattctaccgattgctgaaaatacaataagagcacatcaaggttttggatgggtcggcgaatgggcaaaccttggttgcgaaatgaacaagaaatcaggctcccagctcagtatcacccgtgtccagactcttcattacgccgataaggcaaagacggagcaatacatgctcgatctggtggtgctgctccaccatttagttgtccaggtgaagaacagaggctatgggagcaagtcctcaaagcacgaccagtcccgatcccgcaagggaatggatcttcaacctgaatccaagctcaacacatctccagtgaacaacgccacatatccgagcccgttgtcggagtccgaacgcgagacgctggaccacctgagcttcaagaggacgggctacggtaggagcaagagctgcgagcctccacccaatagagggaagaaggcacatcgaacctgggattcatgccggagccatggcagctcgccggcgagggaattcggtaggaactcagcttcagagcttgacaagacgatggacctggatgtaatagatgggttagatagactgacttcttaccacccaacatcccccacattttgttag</cdnaseq>

Protein Sequence

<aaseq>MGCVCSRRFRDDAAPRSVQPLAAAYEARRGRYGPGDFDSGELAI PPPKLLTSHKVPETGTLLGRASIAAVEVLDTLGSSMTNLNHGSGFLSGGTNRGNRVCI LAFEVANTIAKASNLWRSCSDTSIKELKEEILRSDGVQILVSSNSSELLYIAYVDKRD ELDIFSREVIRFGNLCKDPTWHNLGRYFNKLTTDFAPQDHSKEHMETTIQQLINLAQN TSELYHELHALDRFEQDFQRKFHEEESVPAARRESVMILHSELKRQRKLVKTLKKKSL WSRTLETIVEKLVDIVVFLHKQIRDSFSEAVSVGADLFNSEQAQNKRLGSCGLALHYA NIINQIENIVSRPLSLPPSARDNLYHGLPVTVKSALRSRLQSVNAQEERTVAQIKAEM QKTLRWILPIAENTIRAHQGFGWVGEWANLGCEMNKKSGSQLSITRVQTLHYADKAKT EQYMLDLVVLLHHLVVQVKNRGYGSKSSKHDQSRSRKGMDLQPESKLNTSPVNNATYP SPLSESERETLDHLSFKRTGYGRSKSCEPPPNRGKKAHRTWDSCRSHGSSPAREFGRN SASELDKTMDLDVIDGLDRLTSYHPTSPTFC</aaseq>

Gene Sequence

<dnaseqindica>209..370#2035..2348#2443..2535#2640..2730#3007..3100#3377..3471#3648..3717#3798..3907#4361..4477#4782..4858#4954..4998#5123..5648#ggtcttccttccctccccctcttcctcctcttgctcttcccttccaattccaatcccgcgcgccgatccgatccattcccaccaccaccaccgtcgtctccctcactccaacctccgccacctgcgaaacctaagcttgctgctccgccgacgaggctgatacgtgctgagatactactagtagcacctgtacgtctaagctagagctatggggtgcgtgtgctccaggcggtttcgggacgacgccgcgccgcgctcggtgcagccgctcgccgccgcctacgaggcgcgccggggtcgctacggccctggcgacttcgactccggcgagctcgccatcccgccgcccaagctactcacctcccacaaggtactctactactactaccaccgtaattttctatgcatcatgtgctgcatgtgttggaattttcgagctccatcgatccatcgagatgtgcttcagctcaactctccgccctgcttgcctgcaacttccatcggacagctgcatgtgctgctctctacttcgcgatttgtttctgcttagttaggtagccagccggtgagaattctccacgacttgatgcaccaaacacgcgttgccgcaaacggagcgctttgtttgggttcgaaatctcaatccgccttccacgtccaattcctcaaaatcacaagttgggggtattattgatttgatgttattttttgctgcgtttcttctctcgccgccgtgttcagaaattcagagaagccgtcaaactgagcatcactgtgaagctttaattgagctgcctttcgctgtcaaggcttccatggggacttcatctgaagctgctctctcgtatttcagtctccgctttgattaactcaaatcaaactagattggcagtggtctgaggatgcagaatttcacaaaccgtggggaatctgcactgcatctttgcatgaattctttaagcggatcaggggaaagagagggacacaacaatacatacagcaagtgaaaaccaacagcttacacacacaaaaattcatcaagtccgtgtaggatgcagcagagtcaatcttggcggcccttggtttatcatattgtaagcactattgtcctataggaggaggattccgtccttttgctcagataagtgaagaactgccgtgcttatttaacgttcacgttgctgtcagcctgagtctacttcttggactggtcaagccagcgacccaaccatgagcttctgcttttgttccttcctgctgaccacttttccatgccaaccatggagtttgggaaattacatccttcacttttcttcttgcaaagacatgagtgatctgcttagcttctacttggaagaaaacactaaatgtgcaggagctaataagtgagacaaagtacagactgtataactggaaagaagctgactttgtttatgtactctcagcatgttactagtgttataattcaggcacccagtgattcggcagtcatcctggagatggaaaaagatatagacagatggttactaaagtatcgggttaagaaatacaccaatgcgcagcctactttgatctggccaatgcgcatcaggggtgatcgtctatatatcatcagaaaaatgaaaggaggccatctcccccaaagtgaaaggactacggaatagccttagaggagtgacctccccattttgtttcatttcacccgtttcattcattgagtctatgttttcatcgaaaagcttgcacttcaaattggcttgtttcataattttgcaataagattgacaggaaaagcactgctagttcaaataaatataccttctttcttaggttctttgttacgacgaaacatctgatattattcttcttagaggggataatacgtttctctcgctcttccttttgctttgtttgtgctataactagttgtctttctattggaaattgaaggcagcaaaagcggagactatatcattagaagataagagtagtcttttcctttcatattaactctgacatactaagttgtgacaggtaccagaaacaggtacacttttaggaagagccagcattgctgctgtcgaggtgttagataccctcgggagtagcatgacaaatttaaatcatggcagtggatttctctctgggggaacaaatcgaggcaatagagtctgtattttagcatttgaagtcgcaaacacaatagctaaagcttccaatttgtggagatcttgctccgacacgagtataaaggaattgaaggaagaaatattgcgttcagatggagtgcaaatattggtctcctcaaattccagtgaactattgtatattgcttatgttgacaaaaggtatgattggttcaagaaggaagttgtcctatcgttcctttttttttttgttgttaatgcgattggctgacatggatttgatggaattctacagggatgaacttgacatcttttcaagagaagtaattcgatttggtaacctgtgtaaagacccaacatggcataacttaggacgctatttcaacaagtaagaatctgagaagtatgcttttcatttaagatgctatttacaatcatatcagcacttcctgtacttaacactatgctgttgctgtgaattctgatgtgcagattaacgacagattttgcgcctcaggatcattcaaaagagcatatggaaactactatccagcaattgatcaatttggctcaaaatacttctgtatgtatcacttgataatttctgtattttgccgtatgtaattgataatacttataatttttatggagtcaagatgtaggattcattaatttattattattattctcccttcaaattattgaacggttaaactgctgtaggaatcaggattcaagaatttttcattaggccttaatatcttatcatgaaggactaagtctcgttgcataacatagaaccacagttttgaggtgctggttcgaaggatatgctgatgggcttgttttgtaattgcaggaactctatcatgaattgcatgcgctggacaggtttgagcaggattttcaaagaaaatttcatgaagaagagtcagtgccagcagccagacgtggtacagttatactgatgtcatttttaagaaaatatattgttgatagatgctagaatttaagcaagagggttttccattagctcaccttaattagtgacgtgctgtagattgctctttaaaatacttaaaatggacagacgtatcatgtaacctattcggtcacgaagtggttttccttgtgtgtcttcttttttatgtttgcttctttcacacaatgttgttcaaagtatagaaaatggtgatgcttattgttttcaatcttcttgttcttggcagagagtgttatgatcttgcatagtgaactaaagcgccagagaaagcttgtgaaaactctcaagaagaagtctttgtggtctcgaactttagagacggtattccttaagccacattttgctctgttgcttcattacttcataccacgtgtttgcatttattggattatgtcccattgctaagcaatcgagatttgatgaatactctgctcataatatccacacattttcattttgaagaatgctaacactgaattctgtcattgtctatccagattgtggagaagcttgttgatattgtcgtatttttacataagcaaattcgggattcattcagtgaagctggtaggtgatactcagctggatggtttgcagtagcttaaaatttgtgcgacgatatgctaacacctctctaattaaaaaagtttctgtaggtgctgaccttttcaattcagagcaagctcaaaacaaaagactaggttcctgcggtctagccttacattatgcgaacataatcaatcaaattgaaaatattgtaagttgttttgacttttgatgatccatacccatgtttttcatcccttctggatgtaccactttcaccgtctacacgtttgctatatctgatcttaagactcagtgctctcataatctactgtgtctgctggatatgccccacttccatagctcacatgcttgctatatataatcttaatattcagcatttgcataaagttttgattatgttgatgaatcattcatttattcattttccttaagttaactacaacagtcagttgtaatgaatattttatgtttggtcagtataaagtatctattagtttcttagctactgagtactagttccaacaccatagtgcataggttgtattaccaaagtctagatgtttaatccttaatctccactacagctgatacttgattgattatagagtcaaagttctcaaaacaatgtgtaattatgcaggtttctagaccactctctcttcctcctagtgctagggacaatctgtatcatggtctgccagtaacagtgaagtcagctctcagatcgcgattgcaatcagttaatgcccaagaagaggtttgtgttctctgcagccctgtggtggtaaaacggttcatttcctatattctttatgcacatggaagcagtagtagtatttagatatgactagctcaacactaataagatcttgttacatgctagtttccataagcatattttgctcctgaaaaaggtgaaagtaaaatagtccatgtagattgaaatcttaatatgataataattctgtatatatcatgttaacaaagttgaggactttatatttccagttgtctccaaagcccgcaaactgataaatgtatgctgttttcattatgtgcagcgtactgtagctcaaattaaagctgaaatgcagaaaactcttcgctggattctaccgattgctgaaaatacaataaggtgggcggaacttgttgcaaagtcctactgacttctgagcttagggttattttctccctaaaattcattcctttgtgttttcatacttttaccagagcacatcaaggttttggatgggtcggcgaatgggcaaaccttgggttagtatcaaatcgtgatttgcttatcatataccttggaatttccattgataatataacatgagataaaatagtaacaagtattgctccttgcaacataacctaacatactgctattttctagttgcgaaatgaacaagaaatcaggctcccagctcagtatcacccgtgtccagactcttcattacgccgataaggcaaagacggagcaatacatgctcgatctggtggtgctgctccaccatttagttgtccaggtgaagaacagaggctatgggagcaagtcctcaaagcacgaccagtcccgatcccgcaagggaatggatcttcaacctgaatccaagctcaacacatctccagtgaacaacgccacatatccgagcccgttgtcggagtccgaacgcgagacgctggaccacctgagcttcaagaggacgggctacggtaggagcaagagctgcgagcctccacccaatagagggaagaaggcacatcgaacctgggattcatgccggagccatggcagctcgccggcgagggaattcggtaggaactcagcttcagagcttgacaagacgatggacctggatgtaatagatgggttagatagactgacttcttaccacccaacatcccccacattttgttaggtatatgctgcacaaaaataggtattcttttggtgttcctacggttgattgatcgtatatatatcttgtaaatgtgtgtgatctacctatatattctcttacatgtacatatatacatagcttagtagtacagccctgagtttgagtggaaatatagcaagatcacaagtgatgctctatgcctcgttccc</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0716000, RefSeq:Os06g0716000