Os06g0716700

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Revision as of 09:35, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os06g0716700| Description = Similar to Endoplasmin homolog precursor (GRP94 homolog)| Version = NM_001065125.1 GI:115469981 GeneID:4342077| Leng...")
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Gene Name

Os06g0716700

Description

Similar to Endoplasmin homolog precursor (GRP94 homolog)

Version

NM_001065125.1 GI:115469981 GeneID:4342077

Length

5925 bp

Definition

Oryza sativa Japonica Group Os06g0716700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:31321509..31327433

Sequence Coding Region

31321695..31321943,31322050..31322454,31323033..31323183,31323266..31323404,31323481..31323646
,31323729..31323944,31324045..31324226,31324315..31324441,31324877..31325015
,31325130..31325256,31325404..31325515,31325607..31325687,31326233..31326386
,31326472..31326592,31327294..31327312,31327319..31327363

Expression

GEO Profiles:Os06g0716700

Genome Context

<gbrowseImage1> name=NC_008399:31321509..31327433 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:31321509..31327433 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcgcaagtgggcgctctcctccgcgctcctcctcctcctcctcaccacactccccgatccagctaagaagctccaagtcaatgctgatgacagcactgatgagttagttgatccgccgaaggtagaggagaagattggtggtgttccccatggcctgtccacggactctgaggttgttcagagggaggctgagtcaatctcgaggaagaccctcaggagctcagcggagaaatttgagttccaggctgaggtgtccagactcatggacatcatcatcaactcactctacagcaacaaggacattttcctgagggagctcatctccaatgcttctgatgctttggacaagattaggttcctggctctcactgataaggaggttttgggcgaaggtgacactgctaagcttgaaatccagattaagctggataaggagaagaagattctctccattcgggataggggtattggtatgaccaaggaagatctcattaagaaccttgggaccattgccaaatctggaacttcagcttttgtggaaaagatgcagactgggggtgacctcaatctcattgggcaattcggtgttggtttctattcagtatacttggttgctgactatgttgaagtgatcagcaagcacaatgacgacaaacagcatgtctgggagtccaaagctgatggatcattcgctatctctgaggatacatggaatgaacccctgggccgtggaactgaaataagactgcacctccgagatgaagccaaggagtacgtggaagaagacaagctaaaggatttggtgaagaagtactctgagttcatcaatttccccatttacttgtgggcaaccaaggaggttgatgtggaagtgccagctgatgaggatgagtcaagtgaatcaagtgaagaagaggaatcatcccctgagtctacagaggaagaagagacagaagagagtgaagagaagaagcccaagacaaagacagtaaaggaaaccactactgagtgggagcttctgaatgatgtgaaggctatatggcttcgtagccctaaggaggttactgaagaagaatacacaaagttttaccactcacttgctaaggactttggtgatgacaagcccttgtcttggagccacttcactgctgagggagatgttgagttcaaagctttgctctttgttcctcccaaggctccacatgatctctatgagagttactacaactctaacaagtcaaaccttaagttgtatgttagaagggttttcatctctgatgaatttgatgagcttcttccgaagtatctcagctttttgaagggtctcgtcgactcggacacattgcctctcaatgtatcacgagaaatgctccaacaacatagcagcctgaagaccatcaagaagaaactaatccgcaaagctcttgacatgattagaaaacttgctgaggaagatcctgatgagtacagcaacaaagataagacagatgaagaaaaaagtgcaatggaggagaaaaagggccagtatgccaagttctggaatgagtttggaaaatcagtcaagttgggcatcattgaagacgcaactaacaggaaccgtcttgcaaagcttctgagatttgaaagtaccaagtcggaaggcaaacttgcctctcttgatgagtacatttcaaggatgaagccagggcagaaggacatcttttacattaccggaagcagcaaggaacaattagagaaatcaccgttccttgagaggctaaccaaaaagaactacgaggttatctacttcactgaccctgttgacgagtacttgatgcaatacctcatggactacgaggacaagaagttccagaacgtctccaaggagggtctcaaactcggcaaggactctaagctcaaggacctcaaggagtccttcaaggagctgaccgactggtggaagaaggctcttgacaccgagagcgtggactcggtgaagatcagcaaccggctgagcgacaccccctgcgtggtggtgacatccaagtacgggtggagcgccaacatggagaagatcatgcagtcacagaccctctcggatgccagcaagcaggcgtacatgcgcggcaagagggtactcgagatcaaccccaggcaccccatcatcaaggaactccgtgacaaggtcgcccaggacagcgagagcgagagcttgaagcagacggcgaagctggtgtaccagacggccctcatggagagcggcttcaaccttcctgatcccaaggacttcgcctccagcatctacaggtcggtgcagaagagccttgacctgagccccgacgcggccgtggaagaggaagaggaggtcgaggaggccgaggttgaagagaaggaatcatccaacatcaaggaggaggcggagccgtcgtcgtatgataaggacgagctgtag</cdnaseq>

Protein Sequence

<aaseq>MRKWALSSALLLLLLTTLPDPAKKLQVNADDSTDELVDPPKVEE KIGGVPHGLSTDSEVVQREAESISRKTLRSSAEKFEFQAEVSRLMDIIINSLYSNKDI FLRELISNASDALDKIRFLALTDKEVLGEGDTAKLEIQIKLDKEKKILSIRDRGIGMT KEDLIKNLGTIAKSGTSAFVEKMQTGGDLNLIGQFGVGFYSVYLVADYVEVISKHNDD KQHVWESKADGSFAISEDTWNEPLGRGTEIRLHLRDEAKEYVEEDKLKDLVKKYSEFI NFPIYLWATKEVDVEVPADEDESSESSEEEESSPESTEEEETEESEEKKPKTKTVKET TTEWELLNDVKAIWLRSPKEVTEEEYTKFYHSLAKDFGDDKPLSWSHFTAEGDVEFKA LLFVPPKAPHDLYESYYNSNKSNLKLYVRRVFISDEFDELLPKYLSFLKGLVDSDTLP LNVSREMLQQHSSLKTIKKKLIRKALDMIRKLAEEDPDEYSNKDKTDEEKSAMEEKKG QYAKFWNEFGKSVKLGIIEDATNRNRLAKLLRFESTKSEGKLASLDEYISRMKPGQKD IFYITGSSKEQLEKSPFLERLTKKNYEVIYFTDPVDEYLMQYLMDYEDKKFQNVSKEG LKLGKDSKLKDLKESFKELTDWWKKALDTESVDSVKISNRLSDTPCVVVTSKYGWSAN MEKIMQSQTLSDASKQAYMRGKRVLEINPRHPIIKELRDKVAQDSESESLKQTAKLVY QTALMESGFNLPDPKDFASSIYRSVQKSLDLSPDAAVEEEEEVEEAEVEEKESSNIKE EAEPSSYDKDEL</aaseq>

Gene Sequence

<dnaseqindica>5491..5739#4980..5384#4251..4401#4030..4168#3788..3953#3490..3705#3208..3389#2993..3119#2419..2557#2178..2304#1919..2030#1747..1827#1048..1201#842..962#122..140#71..115#agccgcggcgaggcgacgaactcatcacctccactctctgctgcaacacgagtgaatcggaggcggcacgatgcgcaagtgggcgctctcctccgcgctcctcctcctcctcctcctcctcaccacactccccgatccaggcatgtctctgtctgcccccgccgccggaggcgttgtctgatttttcgcgattttttgggtgtttttctgtgggagtatagtgaattttaggttggaactctgtgatccgttagctccggaggcgaccagtacagattcgatctcacttggtcaccctttgattgactctgctgtgattatttggtgccactacttcgagtaagggagtgagatgtgatgactgatgaattggtagttttttttttttttgaaatagtgctcatagttgtctgatccgtttgtgtggacgtgacttgtgctttgtgcgatctctggtggtgattctagtctgatttttgttttagatctcgcttgttgggttcgcggccacttcgatctgttgtaatggtagggtttattgcgatttcgagatttagctagttctagatccgtaatctgctattgcgcaccgtaattttgtccgcaatagggctcattatatgcggggtttaaatagggtttagtcctgagagtaataatacatctgtatcaagtcagttcagtgtaaatctagtgctgattgttgttgatctagcgcccccaacttactgatcttagtgatttttaaaggcttctcaagtctaattcacacacattgctctaccgcaagtcaacacatgattcaaattattattcggttctgacccttcctgtactgcagctaagaagctccaagtcaatgctgatgacagcactgatgagttagttgatccgccgaaggtagaggagaagattggtggtgttccccatggcctgtccacggactctgaggttgttcagaggtgtgcacgatcttctgatcaatgctgatcgtttccatcttattgtgttgttgatatctgtatgagcaatatggaatgtgtgcagggaggctgagtcaatctcgaggaagaccctcaggagctcagcggagaaatttgagttccaggctgaggtgtccagactcatggacatcatcatcaactcactctacagcaacaaggacattttcctgagggagctcatctccaatgcttctgatgtatgtagttgtattgcattttgactccctttttagggcctattcagaacacaggaaaaggaaaaacacaggataggaaaaacgtaggaatatgaaaggaaatcacgttgaaaacataggattgaaaaacgcaggaatataaaagttgagagcattcggtttacaggaaaggaaataaaaagtaatcgaggagtaatctgtatactgtatttattatctaccgctatcttgcttatcccgtctgtcttgcttattatctagtggctgttttattgcttgattggcttgattctgtcaaagggaatgaaacaagagattggagtggatggaattttcctccgtttttcctgtggaatcagcagcaaaggattttttcctacagttttcccataaccactttttatgatccgaacgataggataggaaaaaatcccatgtgaacagtattcctatgaaattcccgggaaaagcctccaatccaaatgagcccttaaggttattagtagatgctaggaatttaatgtgtgctttttttttatgtgtaggctttggacaagattaggttcctggctctcactgataaggaggttttgggcgaaggtgacactgctaagcttgaaatccaggtatattaaacttcgtagctgatagtcttttttgtgtggtatatcttgttttggaaattgacttcatggcatctgctgtgggcacgtgtagattaagctggataaggagaagaagattctctccattcgggataggggtattggtatgaccaaggaagatctcattaagaaccttgggaccattgccaaatctggaacttcaggtattactcctttgtactgatttctcttaaagttatgtgtattctcttgctaaaactttagtattatctatttgtttgtaaagagaattttaccaagtgccatttaacttaaacttgagtgataccaattccttgaaatttttgcagcttttgtggaaaagatgcagactgggggtgacctcaatctcattgggcaattcggtgttggtttctattcagtatacttggttgctgactatgttgaagtgatcagcaagcacaatgacgacaaacagtaagacaccactgaaatacagcggctacatattgtgtttttggttcatcttcttttccttcactggcatgacaacctacttcatgttctgctgttgcactttttctctgataggcatgtctgggagtccaaagctgatggatcattcgctatctctgaggatacatggaatgaacccctgggccgtggaactgaaataagactgcacctccgagatgaagccaaggagtacgtggaagaagacaagctaaaggtattaccatcattactgtcaattggcttcatgctgtgacatcaaatatgcgatatgcacatgatagtggtacttggtgtctgcattgtctctgtgctttatgcttgtcacctcggaatgtggatgtagctttgctgcaagcttcggataggaattgtcatttcgcttgtttgcatatatggcttatggttagggttgttcaacagcttttttagcatgaattgctgcctttggttgaaacctagtctgtataactagtagggacaagagaccttttcattagccctgaatgtcattgcttacaaggaagtttagcattacctttttgtaaattcattttgctgcatagtctggcaaatttctgttgaatagctgctattgagacattatacaaagaaaataacttactatcttgaacatttcatggtcttgcaggatttggtgaagaagtactctgagttcatcaatttccccatttacttgtgggcaaccaaggaggttgatgtggaagtgccagctgatgaggatgagtcaagtgaatcaagtgaagaagaggaatcatgtaagttttcagtttatgtttttatatcttttagatgatacgtaagttatttgcacataagtgctaacatattagcttttcttggcagcccctgagtctacagaggaagaagagacagaagagagtgaagagaagaagcccaagacaaagacagtaaaggaaaccactactgagtgggagcttctgaatgatgtgaaggctatatggcttcgtagccctaaggaggttactgaagaagaatacacaaagttttaccactcacttgctaaggtacacagactgcagtgatgaatttacaggagcataacattttatgtaagccttgcagaagaaagcaagtaacctcatttaatatcaaattattttgtaggactttggtgatgacaagcccttgtcttggagccacttcactgctgagggagatgttgagttcaaagctttgctctttgttcctcccaaggctccacatgatctctatgagagttactacaactctaacaagtcaaaccttaagttgtatgttagaagggttttcatctctgatgaatttgatgagcttcttccgaagtatctcagctttttgaaggtactagattactatttcatgaacgacacggtattccattcattgacttatgcagcctaaacctataagctattatctgtagggtctcgtcgactcggacacattgcctctcaatgtatcacgagaaatgctccaacaacatagcagcctgaagaccatcaagaagaaactaatccgcaaagctcttgacatgattagaaaacttgctgaggaagatcctgatgagtacagcaacaaagataagacaggtaacaagttctctgtggatcacaggtcatatactgttatttatgatgtaattctcacataatcttctgtactcagatgaagaaaaaagtgcaatggaggagaaaaagggccagtatgccaagttctggaatgagtttggaaaatcagtcaagttgggcatcattgaagacgcaactaacaggaaccgtcttgcaaagcttctgagatttgaaaggtttgtcttctattctaatgtccactaattgctgtagttatatatgcgagggataatagaactgagtttttatctgtttcagtaccaagtcggaaggcaaacttgcctctcttgatgagtacatttcaaggatgaagccagggcagaaggacatcttttacattaccggaagcagcaaggaacaattagagaaatcaccgttccttgagaggctaaccaaaaagaactacgaggtgtgttaccgagaggcctcatttttttacagtatcttatgtcatgcattctatgttttttttttttgaaaagaatgtattctatggtttctccttatggtttttaatattacacattcatcgcattgttgtactgtggtatttctactcatgtctatttactccctcaaaaataagtaggttgatttctggaattgttaggcttagtgttagatttacccattcaagattgcataggtctatatgccaaagatttttgactcaggaatcatgaatctaatggaccataaccctgcaccgaggtcactgtactatgtttcaatacgtgtaatggtacatattatttctgatgtaccttagttttaccatcctctatatcgttgataaacctccacactcctccgcttttaacctaaaaattgctatgtagtatgaatgagggtaaaatcacaggtttgcagaacttcattcagaagccgggtactgcaccacatttattgcttttttatgagctcctccaatagaattactctggatccctggagcttaactaatacttttgttatcttttgttgcaggttatctacttcactgaccctgttgacgagtacttgatgcaatacctcatggactacgaggacaagaagttccagaacgtctccaaggagggtctcaaactcggcaaggactctaagctcaaggacctcaaggagtccttcaaggagctgaccgactggtggaagaaggctcttgacaccgagagcgtggactcggtgaagatcagcaaccggctgagcgacaccccctgcgtggtggtgacatccaagtacgggtggagcgccaacatggagaagatcatgcagtcacagaccctctcggatgccagcaagcaggcgtacatgcgcggcaagagggtactcgagatcaaccccaggcaccccatcatcaaggaactccgtgacaaggtcgcccaggacagcgaggtactgaagcttattagatcgacaaaaacctcactaatatttatcatttctttgcttccaaatacgtcgaaaaaaaaacttatggttttgtgcaatcttgatgcagagcgagagcttgaagcagacggcgaagctggtgtaccagacggccctcatggagagcggcttcaaccttcctgatcccaaggacttcgcctccagcatctacaggtcggtgcagaagagccttgacctgagccccgacgcggccgtggaagaggaagaggaggtcgaggaggccgaggttgaagagaaggaatcatccaacatcaaggaggaggcggagccgtcgtcgtatgataaggacgagctgtagtgatgtgtcgccaccaactgttgtttttttatctagctcttgtgttaggttgtttaaaaatgtgatggtttcgagggacgtccatttttccatgcgaaaatgcatagtaccatgatacggggattttgtcgatgtacgtagtttgtgatactctagttcaaattaatggccgtctaatttcgatca</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0716700, RefSeq:Os06g0716700