Os02g0624400

From RiceWiki
Revision as of 19:19, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os02g0624400

Description

Glycosyl transferase, family 8 protein

Version

NM_001054010.1 GI:115447390 GeneID:4330028

Length

5438 bp

Definition

Oryza sativa Japonica Group Os02g0624400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:25786384..25791821

Sequence Coding Region

25786531..25786788,25787728..25787848,25788013..25788198,25788495..25788643,25789678..25789785
,25789869..25790006,25790094..25790234,25790942..25791221,25791292..25791415
,25791565..25791703

Expression

GEO Profiles:Os02g0624400

Genome Context

<gbrowseImage1> name=NC_008395:25786384..25791821 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:25786384..25791821 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtggcggcggcggggggcgccgtctgggatagggctctgggccgcgctcctcgtcgcggcggccgtgctggcggccggtggcggggcggcggcggcggcggccaaggacgaggcgtacgtgacgctgctgtacggggacgagttcgtcctcggcgtgcgggtcctcggcaagtccatccgcgacacggacaccagccgcgacctcgtggtgctcgtctccgacggggtgtccgagtactcgcggaagctgctcgaggctgacgggtttatagtgaagcatataacattgctggctaatcctaatcaggtaaggccaacaaggttttggggagtttacacgaagttaaaaatattcaacatgacaagctacaaaaaagttgcttacctcgatgcagacaccattgttgtgaaaagtattgaggatattttcaactgtgggaagttctgtgcaaacctgaaacattctgaaaggatgaattctggagtaatggttgtagagccatctgaaactcttttcaatgacatgatggacaaagtaaacagtttaccttcttacacaggaggagatcaaggttttctcaattcatactatgctgatttcgctaattctcgtgtttatgaacccaataaacctacaacgcctgaacctgagactcagcgcctttccaccttgtataatgctgatgttggtctttacatgctggccaataagtggatggttgatgagaaagaacttagggtcattcactacacacttgggcctcttaagccctgggactggtggactgcttggcttgttaaacctgtggcagtatggcaggatatcaggaaaaatcttgaggaatctctccctggaactggtggagggagaaatcctcatgatcaatcagtggtcaaaattcttttctctctccctttattcatgctgatctgtggttattatggttcatgctttcagactaataaggagctgctgtgtataagatctctgtgtgcttttgctcgacgtgctcgctacaaatacaaatcagaggaagcgcttccttcttattcaacaattggagctgcttcatcgtcctttggtatatcacatcaaaagtcacataatggagcacatctgaagctgccttcttattttggtgccatcaccgtactagtctgcttcatttctgctttaatatctcttgcctttgcctttattattattccacggcaagtgatgccatggacgggtttgctgctgatgtatgagtggacctctgtgacgttcttcttgttgttcgggagctacctccgtgttgtatacaattggggaagttctagtgcaaatcatgtcgggcataacaatttagattcatcagaaaatcatgctggtgcaggacttcagcggaatacgtcggactgtgacacagatgcagctttctattggtcagggatggctatactatctagtatagcattattatcaccaacagtcctgggaataactgctctttttgcaaagcttgggttgatggtagcaggtggcgtggtgttggcatcgtttatgacatacgcttcggagcatctagctatctcggcctttgtcaaaggccaaagagataggaacgcctcgagaggtagcatttgttttatgtgctag</cdnaseq>

Protein Sequence

<aaseq>MWRRRGAPSGIGLWAALLVAAAVLAAGGGAAAAAAKDEAYVTLL YGDEFVLGVRVLGKSIRDTDTSRDLVVLVSDGVSEYSRKLLEADGFIVKHITLLANPN QVRPTRFWGVYTKLKIFNMTSYKKVAYLDADTIVVKSIEDIFNCGKFCANLKHSERMN SGVMVVEPSETLFNDMMDKVNSLPSYTGGDQGFLNSYYADFANSRVYEPNKPTTPEPE TQRLSTLYNADVGLYMLANKWMVDEKELRVIHYTLGPLKPWDWWTAWLVKPVAVWQDI RKNLEESLPGTGGGRNPHDQSVVKILFSLPLFMLICGYYGSCFQTNKELLCIRSLCAF ARRARYKYKSEEALPSYSTIGAASSSFGISHQKSHNGAHLKLPSYFGAITVLVCFISA LISLAFAFIIIPRQVMPWTGLLLMYEWTSVTFFLLFGSYLRVVYNWGSSSANHVGHNN LDSSENHAGAGLQRNTSDCDTDAAFYWSGMAILSSIALLSPTVLGITALFAKLGLMVA GGVVLASFMTYASEHLAISAFVKGQRDRNASRGSICFMC</aaseq>

Gene Sequence

<dnaseqindica>148..405#1345..1465#1630..1815#2112..2260#3295..3402#3486..3623#3711..3851#4559..4838#4909..5032#5182..5320#aacgcgacgagcaaagagcaactcctccggcgaaccgaaccctcctcggcttcttcgccgaatcgcccgcccgcgcttctcttctctctcctctcctctcctctcctctcctcgcggcggcggcgggatcagatcgggcggcccgcgatgtggcggcggcggggggcgccgtctgggatagggctctgggccgcgctcctcgtcgcggcggccgtgctggcggccggtggcggggcggcggcggcggcggccaaggacgaggcgtacgtgacgctgctgtacggggacgagttcgtcctcggcgtgcgggtcctcggcaagtccatccgcgacacggacaccagccgcgacctcgtggtgctcgtctccgacggggtgtccgagtactcgcggaagctgctcgaggtacgtccgctcccgcgatgaggattccccagtccacgaattcggtcgatttgttatgggcgtgcatggatcggcggttgtgtgtaaggttggtgtaggattggggaattcagcaggggaaaattaacttgatccatttgccccgagcttatgtggtgtaatcaagtttagtgggacgcgtatctcttatatctagttcagttctgatttaatattatgcagaattggctaactggagaatgctcatgaatggaaataaagttgagaacaagttggagagtttgttaggaggtgttgtatattggagtagtattgttggttagtgtatatttagctaagttgctttaaatctgaaaggagatctttcgattttttttttaaaaaaaaggttgaaatgagagctatttaatgcttttagatgcaacgattcttatttgcatttgccaatctctgaacacagcaaacttaaggagcacctttgctgtccaatctctgaacacagtaagcttaaggagcacctttgctatcttaaacacttaatttagcactctcctcaaatacttttcaaaacaccgttttcatcgcactgtccaaacttgatgaagatgatctggtttattcagatctatgaagtcccttttcagtttaatatcgataaatttatcatgttagtgattagtggttcctgaaaaatctgtacagatattatcttagataatgcattattaatttaatagttcactttgccactttggaaattgcatggttttttttaggtcacattaatttctcaatggacactaagtatgcatgatcattaatttatgtctcacacatgccatttcaattagggtaaaataatctcaccattccctatatattattatgatattagaaattctgttgtggtcttatctgcactgtaatctttgatggcaggctgacgggtttatagtgaagcatataacattgctggctaatcctaatcaggtaaggccaacaaggttttggggagtttacacgaagttaaaaatattcaacatgacaagctacaaaaaaggtatagttggatgatgtgttctgctttctatacatcatgggcattttgtttgttttggtttcatttgaattgcctaattgatctaactattctggtatgttttacccccacttttttttccgaggtcagtattgttctcatattcattttcttttgttttccagttgcttacctcgatgcagacaccattgttgtgaaaagtattgaggatattttcaactgtgggaagttctgtgcaaacctgaaacattctgaaaggatgaattctggagtaatggttgtagagccatctgaaactcttttcaatgacatgatggacaaagtaaacagtttaccttcttacacaggaggttagtacaattcgttacttagcatgcttgttctttctggggctatatacttatatgtttttcttaactgggttgaactatttgacagcaaaatttcattattaaatggtcactttcttagaggctttaccatacaataagaaacactttttcctattgccttcagttagtatgaactgttgattctgcatatgcacggtttgagttgtctttgtttattgtcctatttgttctatacctgtaatctattgtttatattttacatcttatggttttggatattttctttcttgcaggagatcaaggttttctcaattcatactatgctgatttcgctaattctcgtgtttatgaacccaataaacctacaacgcctgaacctgagactcagcgcctttccaccttgtataatgctgatgttggtctttacatgctggccaataaggttatactcaatgcattcacacatcggtcatgtcatcctgctctttaaattttggtggttttgttgctttatatggttaatttattataagaaatatcaccatataacaaggatcactgtatactcaaattaattactttgattgttatcttatcatggtaataaggagagtattctgaaggaccaataaaactttattcaaatgttttaatgcattataaagttttcattcattgaagcataattttttaaaaatcctttaaccattcttgacaagcgggatttttttcctccattacacagtgttttgtcccttcttgcaaggaatgctggaccaacttgctgctcaaatctgacttcttttcttgtctaaaacaactgttcctctcttcacataggatagatggcgctggtgttatctgttcaactcagctgaacttaaaactagttcaccctaacacaacccctcccccaacccccggcacgcacacaaaaaagcagaagaatcctgtttttgtcttttgcaaaattaaaatagtatacaagtccatatagaactggcttgctgttttttcccccatttttgcaaataatatcaaacagtggtttttcatgaagaacaagatgaggaacgatcacaaactttttgactcatgacacaatgtagctcagtataattggcagcatctcatttatgattttcctaatcctggtccttttctcgatatttgtatacttgtggaaaccaaccagctgatgtttttttttctttgtaatgtaagttttagatagccttgtcttatttagttattttcgtaggagagctttgattatattgcacaaatgttgcattagaggtttcaaactgtgttaagcacagacatttgattctcagaaaagattcaataccatcagctaacacactatcacaacatttcagatttagaacgttttaacaccttatgatatctcatcatatataatccacagcctgctgattatttgtaaacgtcgccttcctaactttgctgcagtggatggttgatgagaaagaacttagggtcattcactacacacttgggcctcttaagccctgggactggtggactgcttggcttgttaaacctgtggcagtatggcaggtaattaggtatttcttgtgtgattttagtgggatgtgaagtagcagaatggctcaatgaacttgtgttatccattgttgcaggatatcaggaaaaatcttgaggaatctctccctggaactggtggagggagaaatcctcatgatcaatcagtggtcaaaattcttttctctctccctttattcatgctgatctgtggttattatggttcatgctttcaggttaaattctcctcttgctggaaatatttttctttaatttcatggacatgtggcctaaatggtctgtctatcttatgtactatacagactaataaggagctgctgtgtataagatctctgtgtgcttttgctcgacgtgctcgctacaaatacaaatcagaggaagcgcttccttcttattcaacaattggagctgcttcatcgtcctttggtatatcacatcaaaaggttgattacacttaaaagtttaaactatgaattgtgaatctttattatatgtatgtaagatccactgtgtacatcattgccttcagaaaattttcagtaatttcctgccaatttgaagtagatctttgttacactctctgtccaattcataggcgtattttaatttggcatagtggtcaaacttagactttgacaattaattttctcttacaatatattgcagtggttacaaaagccagtatcatatgatagcacattgaatcatttgtatacattaagcatgcatataatttgactaattattagttaaaacttacaaagtctgggccttccaaatagatggacccatggacaccttataaaattaaacggagggaatagtatctaagttgcatattaagcacatttgtgacatcaataagccggtagagtttttcctgttggataatgttttctattcaaaaccaggatcgttttaggttctaaaaacttgcataactttgacgaatgttggtaaaggaccaggctttgttttcttcgaaagaactatcatgcaaaaccacatctagaggggaaatatttatactattttcacttatctaattaatttcctgaccctgattccacatatcatatatcatgtacctttttcagaaattgagtttgctttcatgataataacttgatgtttgctaactcccttgcagtcacataatggagcacatctgaagctgccttcttattttggtgccatcaccgtactagtctgcttcatttctgctttaatatctcttgcctttgcctttattattattccacggcaagtgatgccatggacgggtttgctgctgatgtatgagtggacctctgtgacgttcttcttgttgttcgggagctacctccgtgttgtatacaattggggaagttctagtgcaaatcatgtcgggcataacaatttagattcatcagaaaatcatgctggtgcaggtttgtaaacttacacaacttcctgcaaatttgtatttcttgcttaggctaatgtgtagtccatttccaggacttcagcggaatacgtcggactgtgacacagatgcagctttctattggtcagggatggctatactatctagtatagcattattatcaccaacagtcctgggaataactgctctttttgcaaagtaagatagggggtggttcattgtctacttttcttcattttgaaggaaactggcaaaataatctgtagctactgttcagctggctccatttttaacttctcaaaacagtgtgaacctaacaaattctgttgtgttctttcctttggcaggcttgggttgatggtagcaggtggcgtggtgttggcatcgtttatgacatacgcttcggagcatctagctatctcggcctttgtcaaaggccaaagagataggaacgcctcgagaggtagcatttgttttatgtgctagtcattctttgaccgcggcaatttctttcaccttgtgtccgaaatgtgcctgttgtaatttgtatcataatgttgtaaaggaaaattttgatgatttatttagtagaaaaggttgtcag</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0624400, RefSeq:Os02g0624400