Os06g0717200

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Revision as of 09:35, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os06g0717200| Description = Protein kinase-like domain containing protein| Version = NM_001065128.2 GI:297606509 GeneID:4342080| Length = 4369 b...")
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Gene Name

Os06g0717200

Description

Protein kinase-like domain containing protein

Version

NM_001065128.2 GI:297606509 GeneID:4342080

Length

4369 bp

Definition

Oryza sativa Japonica Group Os06g0717200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:31347107..31351475

Sequence Coding Region

31347277..31347641,31348842..31351461

Expression

GEO Profiles:Os06g0717200

Genome Context

<gbrowseImage1> name=NC_008399:31347107..31351475 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:31347107..31351475 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcctcctactctcctcctcctcctcctcctcctcccaccctccctcgcctcccccgaccgcgacatctacgcgctcgccaagctcaaggcggcgctcgtcccatccccctccgccaccgccccaccgccgctcgccgactgggacccggccgcgacctcccccgcgcactgcaccttctccggcgtcacctgcgacggccgctcccgcgtcgtcgccatcaacctcaccgccctcccgctccactccggctacctcccgcccgagatcgccctccttgactccctcgccaacctcaccatcgccgcctgctgcctccccggccacgtccccctcgagctccccaccctcccctctctccgccacctcaacctctccaacaacaacctttccggccacttccccgtccccgactccggcggtggcgcctccccctacttcccctcgctcgagctcatcgacgcttacaacaacaacctctcagggttgcttcctcccttctccgcttcacacgctcgcctccgctacctccacctcggcggcaactacttcaccggcgcaatcccggacagctatggcgacctcgccgcgctcgagtaccttggactcaacggcaacacgctctccggccatgtccccgtctccctctcccgcctcacccgcctccgcgagatgtacatcggatactacaaccagtacgacggcggcgtcccgccggagttcggcgacctcggcgcgctcctccgcctcgacatgagcagctgcaacctcaccggccccgtcccgccggagctcggccgactccagcgcctcgacacgctcttcctgcagtggaaccgcctctccggcgagataccgccgcagctcggcgatctcagcagcctcgcgtcgctcgacctctccgtcaacgacctcgccggcgagatccctcccagcctcgccaacctctccaacctcaagctcctcaacctcttccggaaccacctccgcggcagcataccggacttcgtcgccggcttcgcgcagctcgaggtgctgcagctgtgggacaacaacctcaccggcaacatccccgccgggctcgggaagaacggccgcctcaagacgctcgacctggccaccaaccacctcaccggccccatcccggcggacctctgcgccggccggcggctggagatgctcgtgctcatggagaacggcctgttcggccccatcccggactcgctcggcgactgcaagacgctcacgcgcgtccgcctcgccaagaacttcttgaccggcccggttcccgccgggctcttcaacctcccgcaggccaacatggtggagctcaccgacaacctgctcaccggcgagctcccggacgtgatcggcggcgacaagatcggcatgctgctgctggggaacaatgggatcggtggccgcatccctccggccatcggcaacctcccggcgctgcagacgctgtcgctggagtccaacaacttctccggagcgctgccaccggagatcggcaatctcaagaacctgtccaggctcaacgtcagcggcaacgcgctcaccggcgccattccagacgagctcatccgctgcgcctccctcgccgccgtcgacctcagccgtaacggcttctccggcgagataccggagagcatcacgtcgctcaagatactgtgcacgctgaacgtgtccaggaacaggctcaccggcgagctcccgccggagatgtccaacatgacgagcctcacgacgctcgacgtgtcgtacaacagcctctcgggccccgtgccgatgcaggggcagttcttggtgttcaacgagagctcgttcgtcggcaacccggggctgtgcggcggccccgtggccgacgcgtgccctccgtccatggccggcggcggcggcggcgcggggtcccagctgcggctgcggtgggactcgaagaagatgctggtggcgctggtggcggcgttcgcggcggtggcggtggcgttcctgggcgcgaggaaggggtgctcggcgtggcggtcggcggcgcggcggcggtcgggggcgtggaagatgacggcgttccagaagctggagttctcggcggaggacgtggtggagtgcgtgaaggaggacaacatcatcgggaagggcggcgcggggatcgtgtaccacggcgtgacgcgcggggcggagctggcgatcaagcggttggtggggcgcggcggcggcgagcacgaccgggggttctcggcggaggtgacgacgctggggaggatcaggcaccggaacatcgtgaggctgctggggttcgtgtcgaacagggagacgaacctgctgctgtacgagtacatgccgaatgggtcgctgggggagatgctccatggcgggaagggggggcacctcgggtgggaggcgagggcgcgggtggcggcggaggcggcgtgcggcctctgctacctccaccatgactgcgccccgaggatcatccaccgcgacgtcaagtccaacaacatcctcctcgactccgccttcgaggcgcacgtcgccgacttcggcctcgccaagttcctcggcggcgccacctccgagtgcatgtccgccattgctggctcctacggctacatcgcgccagagtacgcatacacgctgcgagtggacgagaagagcgacgtgtatagcttcggtgtggtgctattggagctcatcaccggacgccgccccgtgggcgggttcggtgacggcgtggacatcgtgcactgggtccgcaaggtgaccgccgagctgccggacaactccgacacggcggccgtcctcgccgtggccgaccgccgcctgacgccggagccggtggcgctgatggtgaacctgtacaaggtggccatggcgtgcgtggaggaggcgagcacggcccggcccaccatgcgcgaggtcgtccacatgctctccaacccaaactcggcccagcccaatagtggtgacctcctcgtcaccttctga</cdnaseq>

Protein Sequence

<aaseq>MPPTLLLLLLLLPPSLASPDRDIYALAKLKAALVPSPSATAPPP LADWDPAATSPAHCTFSGVTCDGRSRVVAINLTALPLHSGYLPPEIALLDSLANLTIA ACCLPGHVPLELPTLPSLRHLNLSNNNLSGHFPVPDSGGGASPYFPSLELIDAYNNNL SGLLPPFSASHARLRYLHLGGNYFTGAIPDSYGDLAALEYLGLNGNTLSGHVPVSLSR LTRLREMYIGYYNQYDGGVPPEFGDLGALLRLDMSSCNLTGPVPPELGRLQRLDTLFL QWNRLSGEIPPQLGDLSSLASLDLSVNDLAGEIPPSLANLSNLKLLNLFRNHLRGSIP DFVAGFAQLEVLQLWDNNLTGNIPAGLGKNGRLKTLDLATNHLTGPIPADLCAGRRLE MLVLMENGLFGPIPDSLGDCKTLTRVRLAKNFLTGPVPAGLFNLPQANMVELTDNLLT GELPDVIGGDKIGMLLLGNNGIGGRIPPAIGNLPALQTLSLESNNFSGALPPEIGNLK NLSRLNVSGNALTGAIPDELIRCASLAAVDLSRNGFSGEIPESITSLKILCTLNVSRN RLTGELPPEMSNMTSLTTLDVSYNSLSGPVPMQGQFLVFNESSFVGNPGLCGGPVADA CPPSMAGGGGGAGSQLRLRWDSKKMLVALVAAFAAVAVAFLGARKGCSAWRSAARRRS GAWKMTAFQKLEFSAEDVVECVKEDNIIGKGGAGIVYHGVTRGAELAIKRLVGRGGGE HDRGFSAEVTTLGRIRHRNIVRLLGFVSNRETNLLLYEYMPNGSLGEMLHGGKGGHLG WEARARVAAEAACGLCYLHHDCAPRIIHRDVKSNNILLDSAFEAHVADFGLAKFLGGA TSECMSAIAGSYGYIAPEYAYTLRVDEKSDVYSFGVVLLELITGRRPVGGFGDGVDIV HWVRKVTAELPDNSDTAAVLAVADRRLTPEPVALMVNLYKVAMACVEEASTARPTMRE VVHMLSNPNSAQPNSGDLLVTF</aaseq>

Gene Sequence

<dnaseqindica>3835..4199#15..2634#catcgcatttcacaatgcctcctactctcctcctcctcctcctcctcctcccaccctccctcgcctcccccgaccgcgacatctacgcgctcgccaagctcaaggcggcgctcgtcccatccccctccgccaccgccccaccgccgctcgccgactgggacccggccgcgacctcccccgcgcactgcaccttctccggcgtcacctgcgacggccgctcccgcgtcgtcgccatcaacctcaccgccctcccgctccactccggctacctcccgcccgagatcgccctccttgactccctcgccaacctcaccatcgccgcctgctgcctccccggccacgtccccctcgagctccccaccctcccctctctccgccacctcaacctctccaacaacaacctttccggccacttccccgtccccgactccggcggtggcgcctccccctacttcccctcgctcgagctcatcgacgcttacaacaacaacctctcagggttgcttcctcccttctccgcttcacacgctcgcctccgctacctccacctcggcggcaactacttcaccggcgcaatcccggacagctatggcgacctcgccgcgctcgagtaccttggactcaacggcaacacgctctccggccatgtccccgtctccctctcccgcctcacccgcctccgcgagatgtacatcggatactacaaccagtacgacggcggcgtcccgccggagttcggcgacctcggcgcgctcctccgcctcgacatgagcagctgcaacctcaccggccccgtcccgccggagctcggccgactccagcgcctcgacacgctcttcctgcagtggaaccgcctctccggcgagataccgccgcagctcggcgatctcagcagcctcgcgtcgctcgacctctccgtcaacgacctcgccggcgagatccctcccagcctcgccaacctctccaacctcaagctcctcaacctcttccggaaccacctccgcggcagcataccggacttcgtcgccggcttcgcgcagctcgaggtgctgcagctgtgggacaacaacctcaccggcaacatccccgccgggctcgggaagaacggccgcctcaagacgctcgacctggccaccaaccacctcaccggccccatcccggcggacctctgcgccggccggcggctggagatgctcgtgctcatggagaacggcctgttcggccccatcccggactcgctcggcgactgcaagacgctcacgcgcgtccgcctcgccaagaacttcttgaccggcccggttcccgccgggctcttcaacctcccgcaggccaacatggtggagctcaccgacaacctgctcaccggcgagctcccggacgtgatcggcggcgacaagatcggcatgctgctgctggggaacaatgggatcggtggccgcatccctccggccatcggcaacctcccggcgctgcagacgctgtcgctggagtccaacaacttctccggagcgctgccaccggagatcggcaatctcaagaacctgtccaggctcaacgtcagcggcaacgcgctcaccggcgccattccagacgagctcatccgctgcgcctccctcgccgccgtcgacctcagccgtaacggcttctccggcgagataccggagagcatcacgtcgctcaagatactgtgcacgctgaacgtgtccaggaacaggctcaccggcgagctcccgccggagatgtccaacatgacgagcctcacgacgctcgacgtgtcgtacaacagcctctcgggccccgtgccgatgcaggggcagttcttggtgttcaacgagagctcgttcgtcggcaacccggggctgtgcggcggccccgtggccgacgcgtgccctccgtccatggccggcggcggcggcggcgcggggtcccagctgcggctgcggtgggactcgaagaagatgctggtggcgctggtggcggcgttcgcggcggtggcggtggcgttcctgggcgcgaggaaggggtgctcggcgtggcggtcggcggcgcggcggcggtcgggggcgtggaagatgacggcgttccagaagctggagttctcggcggaggacgtggtggagtgcgtgaaggaggacaacatcatcgggaagggcggcgcggggatcgtgtaccacggcgtgacgcgcggggcggagctggcgatcaagcggttggtggggcgcggcggcggcgagcacgaccgggggttctcggcggaggtgacgacgctggggaggatcaggcaccggaacatcgtgaggctgctggggttcgtgtcgaacagggagacgaacctgctgctgtacgagtacatgccgaatgggtcgctgggggagatgctccatggcgggaagggggggcacctcgggtgggaggcgagggcgcgggtggcggcggaggcggcgtgcggcctctgctacctccaccatgactgcgccccgaggatcatccaccgcgacgtcaagtccaacaacatcctcctcgactccgccttcgaggcgcacgtcgccgacttcggcctcgccaagttcctcggcggcgccacctccgagtgcatgtccgccattgctggctcctacggctacatcgcgccaggtaaccacccaaaataatttctccatattatttttagcctatttcttattactattctttttcaatgcgaaccactacagtactgtagtactaaatttaccgaaatgaatctgtttgaaaaatattgaattccaagacccaacaagtttatcctgatccatgtgttgaaagaacaaactttttttttctgatccatgtgttgaatgaacaaaccttttctgtttaaccatgacaaggaacaaactttatatctggaccatgacaaagaacaaacttttaatgtgcttaaaataaataatggttctaactataactaatataattgaaatgatctgatacgattatacgaagtgtcattgaaaaattgtaaactttacgtagaggcaataatagagggggcccctgcatggagatgcagccacgttccatccactggaactgcactagtactgtactgcagcttgtgctttcctctgagcacaatccttgttgccttgtgcacggtcaactggggagaggacaaatgttacctttgggccaaagtgtgaacttttttttttctgcagacagcaaacaaaagttacagctacagttcttgccgttgcatggctgtagcagtgattgtgattaatggtcagttcagttttctgctctgtttctttggattctacagaagcagatcttgcagccatatgtatggtcaatggcaggcaaggcaatttggctacctttggattaatggatagtctcctgcctttggagtactagcattcatattgtgtcgtcttgttgcctcgtgtgtggcacactggcactctcttggataattggaggagatactgttctactgtagctgtatcacgttcgtatcttggctgtatctccatggtagatctgctccttattgacttgtcagtccactcttaaatggtgttgttggtgaagtacgtagcttcaggataacctgtctttcaaacgattcgagtgtgatgcactaccctgaaaaatgaaaattctgtctagtggctgtggttacattcagttatgcaaatgtgcagctctaatggctgtagttacattcagttatgcgcgttgggaaaggatcggtacactaatatctttttgattgataatctaaaaatggtatgttaggtatcatctaactgattcatcaatcctatgtactatttgtgtttgcagagtacgcatacacgctgcgagtggacgagaagagcgacgtgtatagcttcggtgtggtgctattggagctcatcaccggacgccgccccgtgggcgggttcggtgacggcgtggacatcgtgcactgggtccgcaaggtgaccgccgagctgccggacaactccgacacggcggccgtcctcgccgtggccgaccgccgcctgacgccggagccggtggcgctgatggtgaacctgtacaaggtggccatggcgtgcgtggaggaggcgagcacggcccggcccaccatgcgcgaggtcgtccacatgctctccaacccaaactcggcccagcccaatagtggtgacctcctcgtcaccttctgaaccccaaacttaacggtattgtttgctgttaatgtgtgcgcttaattagcggctaattaattttggcttagctggtacttttgccgcgtgtggttgacgtgtacaataacaggcggattactactgcttttctgctatgcgtaatagctaaatgaatatgtgcatattag</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0717200, RefSeq:Os06g0717200