Os02g0642600

From RiceWiki
Revision as of 19:19, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os02g0642600

Description

Hypothetical protein

Version

NM_001054091.2 GI:297599667 GeneID:4330127

Length

7515 bp

Definition

Oryza sativa Japonica Group Os02g0642600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:26692912..26700426

Sequence Coding Region

26693094..26693210,26693295..26694821,26694964..26695701,26696080..26696287,26696823..26698777
,26699236..26699250

Expression

GEO Profiles:Os02g0642600

Genome Context

<gbrowseImage1> name=NC_008395:26692912..26700426 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:26692912..26700426 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgaaaatccatttggatttcattgatattgagaccgacataaaaataagatatcaatctgatcttccagagtcagtgtatcaagtagaaaaggtccctgtaaaagacaatgatggcaatggccattcttctctgagagaagactgctgcttggagattgcagcactagatcatggtgcagtaatacctcgattggaagtaagtaggaattcttgggagctcgacgattgtctgactgagactgacagatacggtgtttttgataatgttgttagacacttggatgaagcacagattcagcattcagtgtttaaatcaaccgagttcttgagatcaactgacatggacatgctgacctttgtttgtgaagatgcaccatgccatgacattcaagtagataaaccagcagaaatcaaagctgcagtagaaatggatgttgtgaggatcaatggcaatattctgcttgagaaaaattcagcactctaccctctcaagcctgatggcacctgttcagacttgccttgctccattcttttagaggaggtacagatcattgattttccttcagataatgtattcaaaatgcttgttcagtcagagacaaataagatgaatatatctgatgaaatattcaaagatgattttgatccagcaagacgtttgtatgaatcaatggttagctgcgagttagcactggttgatgatacatttaggtcattgcctacacctattttaaatgatgatatagcagttaggtctagggtccctcccattcaagaaatactatgctccctaaaaccacaccctctatcagcatctgatggaatttatttggattggcatctcttactggaaggaccatgcaaccgggagatttgttgttcttatgcaagcatggttgaggaggcaaaaacttgccatttaagttctgagctgcaaaggagttgtcagagtacatcagtatttgttagcgattttctggaggattttcagagaagtccaaagcttcaagatgaggataaacatagcgatatttatgttcctgccccactgtctcatgatccacaaaaattggaagcaactcaaaaatgcgaacaagaaggtggtactagaaaccatagttccatgaaaagaccgagtccagaaaagtcatcttccttccctgagttaatatcacattctggtgacctaaatttttacttaaacgtcagaagtgccactaagagtggaaccaataatgagaatacttctactttagatgtcccgcattcagaagagcaagcattatctctttcaaccagggctaaggttgacaaactcatagaaattcatcctgtcagcccctcaaatcttattcaaggccttatagaacaaatccatgcaagctatacatctgctctgcaagaaagcacatattggaggcattctttctcagatgagcaaggtttaggaatctcaaagcagaaacttcttgaactgataacgggagaaggttcagaaggctcgtacaatcactgcgaacacaaagataagatggaactcattgtactgtatgcattaaagcaggttgcatattacttatgtttctttggtctgcatgcggcccatttgtacattagcaacctgactagaagcttggaaaacactcctgagaggttaaaacatattctatggtccatttctgaagcacagaggaaatctgagaggcaactgtttgaatctcatccgtcattgtcatgcattgagactatcctgagatctaataaacaaatcgaccaaaagatccttatagttgctgatagagctttctggctgccactgggtcaaaagctagcatccatgaggatgacatttgttgagtttggacaaaaccctgcaacaacttttgtggatctggtgaacaagacaaactctacagcttgggtgctggaagaattactgaaatcagattgcattctgctagataacaagaacattccagcttcattcccttttgacaagtttggcatcatactggaatatggaggcccgaataaatcatctaccttgttatctctcgctcctaaattagatggtttgccacctctgcatttcctctatgtcaaagttgatggcaaggactttccagctgctctagtcgaggacaaccataaagaccaggatttgaaatctacattggataaagttttgcttacacttcagaaggatttgcaggagaggatgaataaaatgcgtattgttgattcgttaaacttcataccagcaacaaatcaactgcaaggtcttcaagaaaaacggagcaaacattttgctgctgatgctacaaaagaactgcttccagatgatcaaccacacagattacaaaatcttaacaagaagaatacttttgattcacataacgttgtgcttgctgatgaacagctacatatacagcaaacactgagtaataaacctgttgtcaattcacaatgtgtacccacagttgagaagagtagctctacttcttctgtatctgccaatgtgctgaaagaccctcaagagaatcagtccactactgacttaccttcctgtgtgaaaaatgactgcatcatgccaggaagactgtccgtcccagatgtagtgatagttgtaaatactggaaatcatggaaagacgatgcttgtttcgcgaagatcatcttatcagcagatactagctctggagaaaggaggaatgcaggtcgtggagcgagatattgatctgcctgtggatctgatactcagtgctgctgtctgcctagtatggtatgagactgcgctctttgaggccaatgaactaacaacatcagcagagacatctggtataaaagaaaatgtagagaatattgcgaccaacattctgatgtcagttagtttctctttcactggctgcatcatgaacagtttccttgtacttttgcaggtctttgagggagaagctgacttcctttctgctgtaatggactcatctgattcattgtatactgcagctgctagtttggacatgaacttgcagctgttcttctcacacacacccaggtcaacagatgaaataattctcaattgcattacaaatgtgactagctgttataaagctcctcttccagatatacctgaatcagaaagcctggctgaatcatttctcacaagtttcccttccatcaatcccgtgtctgcatatatgttactttcttctggaggcagccttgtggagttcctcagttggccacatgagcgccgtattcaagcagttggaaagtatcttttgtctccaaagatcatttccctatttaatgctttgtgcaaatttggtgagttaggtgaatcaaggtctgtaatgactgaatgctcttcagtcgattcagatatcagtagtgcattcctgcagtctccgaggaaaaggaaacagcgttcattgcaggcttgtgcagtaccaactaataagctcctcttttctgattctctaaaccaaatacctggtgactatgcagaacatgctgaggtattctcaccttctaagttgaggaagttctctgacatggataatacaattcccgagctcccagatgtctttacattcgacgaaagtttgaatatgagaagtgagggattctcttatcaacaaaagaagcatgatgtggatgcaatacctggtaatcaagtcattaatgatgatttcagcaatggattgacaccaaataatcaagcatataacagaaggactggcaatatggtggacacattcgacttaccctggcaacctgaatttggtggtacgcatccaagcaaaagcacttttcacacaagcagaccatcttgcagcagaactcatagcaatccagtattttcaactgcatttgagatcaacgatgatcctggtgagtggaacatttcaggaggtacaaaacaaacatggaaggggcttgcacatggaggtactgtagacgactcttacagatatgatatggacaacagatatcatgaaccaagagatgaaattatgcaacatccagcaagttcgcttgcttttcagaaactagattttggtagccatgcaacttcacaggggtcatgctgggaaattgattatctaaggcaaatgagtgcaaagagaaaagcacgtcaggagagatctagatgtagtaattcaccaggtatgtcgatcccaagaatgagagatagcaactcaaagattctaaatcctccacctaaagaatccttcagataccgaggagatagagacactccttcgagggaccagagcccttcaattgggactcagcattatgggaaaggcaaggaaggagctaaagcacagaatcgcagagcaaggaaagatttcaatgtacaaccaacaagtcacaaaaagaggatagaaccgtccattgatccaacatggactcctattgacaagagagcaagacagaaactttcatttgttacatatgggaaggaaaaacagagcaagctggtctggcgaaaccagaacagccctggtgttgggtgtggcttccggaaaagattccgagaggaaggtacgtag</cdnaseq>

Protein Sequence

<aaseq>MKIHLDFIDIETDIKIRYQSDLPESVYQVEKVPVKDNDGNGHSS LREDCCLEIAALDHGAVIPRLEVSRNSWELDDCLTETDRYGVFDNVVRHLDEAQIQHS VFKSTEFLRSTDMDMLTFVCEDAPCHDIQVDKPAEIKAAVEMDVVRINGNILLEKNSA LYPLKPDGTCSDLPCSILLEEVQIIDFPSDNVFKMLVQSETNKMNISDEIFKDDFDPA RRLYESMVSCELALVDDTFRSLPTPILNDDIAVRSRVPPIQEILCSLKPHPLSASDGI YLDWHLLLEGPCNREICCSYASMVEEAKTCHLSSELQRSCQSTSVFVSDFLEDFQRSP KLQDEDKHSDIYVPAPLSHDPQKLEATQKCEQEGGTRNHSSMKRPSPEKSSSFPELIS HSGDLNFYLNVRSATKSGTNNENTSTLDVPHSEEQALSLSTRAKVDKLIEIHPVSPSN LIQGLIEQIHASYTSALQESTYWRHSFSDEQGLGISKQKLLELITGEGSEGSYNHCEH KDKMELIVLYALKQVAYYLCFFGLHAAHLYISNLTRSLENTPERLKHILWSISEAQRK SERQLFESHPSLSCIETILRSNKQIDQKILIVADRAFWLPLGQKLASMRMTFVEFGQN PATTFVDLVNKTNSTAWVLEELLKSDCILLDNKNIPASFPFDKFGIILEYGGPNKSST LLSLAPKLDGLPPLHFLYVKVDGKDFPAALVEDNHKDQDLKSTLDKVLLTLQKDLQER MNKMRIVDSLNFIPATNQLQGLQEKRSKHFAADATKELLPDDQPHRLQNLNKKNTFDS HNVVLADEQLHIQQTLSNKPVVNSQCVPTVEKSSSTSSVSANVLKDPQENQSTTDLPS CVKNDCIMPGRLSVPDVVIVVNTGNHGKTMLVSRRSSYQQILALEKGGMQVVERDIDL PVDLILSAAVCLVWYETALFEANELTTSAETSGIKENVENIATNILMSVSFSFTGCIM NSFLVLLQVFEGEADFLSAVMDSSDSLYTAAASLDMNLQLFFSHTPRSTDEIILNCIT NVTSCYKAPLPDIPESESLAESFLTSFPSINPVSAYMLLSSGGSLVEFLSWPHERRIQ AVGKYLLSPKIISLFNALCKFGELGESRSVMTECSSVDSDISSAFLQSPRKRKQRSLQ ACAVPTNKLLFSDSLNQIPGDYAEHAEVFSPSKLRKFSDMDNTIPELPDVFTFDESLN MRSEGFSYQQKKHDVDAIPGNQVINDDFSNGLTPNNQAYNRRTGNMVDTFDLPWQPEF GGTHPSKSTFHTSRPSCSRTHSNPVFSTAFEINDDPGEWNISGGTKQTWKGLAHGGTV DDSYRYDMDNRYHEPRDEIMQHPASSLAFQKLDFGSHATSQGSCWEIDYLRQMSAKRK ARQERSRCSNSPGMSIPRMRDSNSKILNPPPKESFRYRGDRDTPSRDQSPSIGTQHYG KGKEGAKAQNRRARKDFNVQPTSHKKRIEPSIDPTWTPIDKRARQKLSFVTYGKEKQS KLVWRNQNSPGVGCGFRKRFREEGT</aaseq>

Gene Sequence

<dnaseqindica>7217..7333#5606..7132#4726..5463#4140..4347#1650..3604#1177..1191#agtagaacacacaaggcaatgcagcggaaacccaccgcaactccgcattccgcaagccaagatcaaaagttggcgtatcaaaacattttgaaaaccaaaaaattcgtcttcaacctcctgctcccctcgcttcgttctccgccgcgccattcgccatgaggacccgcttcctcgccaccgactacttcgcgccgtcctcctcctccgccgccggcaaagcgctagccctagagttcttcagcttcccctctctccccgtccccgcccttcctcccgatccccacttcctcccgttcacctccgccgacgaactcccagccgccacggtcgccgacgatggtctcggccctctccccatcgcctccgcgctctccgatttcctcgccgcggttatcccgcaggccctgcctgtgccgactgtgcccgcggccgacgaggtgagcgagccacctgcgaattcgggtttcgcgttctcgagtcgtgcggggcttggttgggggtggctcggggttgctgttgcttgctctgtgctgtttttggttgattgatatttctatgtgagaaaatcgtgtggcatctgtgagttgcaacagctcatctgctagattctgcttcacgcaggtattggacgacttcctgtacgacagaggcggatacggcgaggatttcagctcatgggagtttggtgcattcagaatccctaaggcaagtgaagtttttatgtttggattctgtaggctgaatttcctatggagcatttgcgaacacttttttgtttttctataggggtatggcgtgatcaaccgcgagaaggatgaaaagggggagggctctagatcagacggtctggagatctcctcagttatgaaggtgacatagtagttagtttgctagccttgtacatgctttgactgttcttagggaattgatgttcgatttatgcattatgtggtgctagaggtgggaacaattgaaggagcttagatttgaggttgtagaggtggatctcctaatggtgagcagcgtttcagtgatattggttgatattattatgttgtttccttttcaaattcaaactcgattgttctggtgtctaaggctttgcaagaagacattgcatcctttggtgaagaggagtctggtggtggtgtcacgttgttgcttcgtgttccagatatgaaaatccatttggtaactacatcatctcatcacaatatcaaataattcgctcctctatactcccaaaagatcaataatgcgcatggagctgcagttcagctatgggagacatatgaacatgttgtacttagagttaaatggttatgatacttccgttcttataccatgttgtatttcgattgtaatgcgcgcatcacccaaaatatatacttctacacaataacatgataagcggttatctcctaccttttgtgttaattgtggattcactagtaatatttgtatcctccctgtcatatttctgtattatgtaactatcactatcataccatcaaagttgcaaaaacataaatcagttgaagttgcttatgcctgctggtgaacatgttgatttgattcccttgtgttttattaactcaaacatattctttgatacatcatgctcacgttctcgtctctgtttctcacaggatttcattgatattgagaccgacataaaaataagatatcaatctgatcttccagagtcagtgtatcaagtagaaaaggtccctgtaaaagacaatgatggcaatggccattcttctctgagagaagactgctgcttggagattgcagcactagatcatggtgcagtaatacctcgattggaagtaagtaggaattcttgggagctcgacgattgtctgactgagactgacagatacggtgtttttgataatgttgttagacacttggatgaagcacagattcagcattcagtgtttaaatcaaccgagttcttgagatcaactgacatggacatgctgacctttgtttgtgaagatgcaccatgccatgacattcaagtagataaaccagcagaaatcaaagctgcagtagaaatggatgttgtgaggatcaatggcaatattctgcttgagaaaaattcagcactctaccctctcaagcctgatggcacctgttcagacttgccttgctccattcttttagaggaggtacagatcattgattttccttcagataatgtattcaaaatgcttgttcagtcagagacaaataagatgaatatatctgatgaaatattcaaagatgattttgatccagcaagacgtttgtatgaatcaatggttagctgcgagttagcactggttgatgatacatttaggtcattgcctacacctattttaaatgatgatatagcagttaggtctagggtccctcccattcaagaaatactatgctccctaaaaccacaccctctatcagcatctgatggaatttatttggattggcatctcttactggaaggaccatgcaaccgggagatttgttgttcttatgcaagcatggttgaggaggcaaaaacttgccatttaagttctgagctgcaaaggagttgtcagagtacatcagtatttgttagcgattttctggaggattttcagagaagtccaaagcttcaagatgaggataaacatagcgatatttatgttcctgccccactgtctcatgatccacaaaaattggaagcaactcaaaaatgcgaacaagaaggtggtactagaaaccatagttccatgaaaagaccgagtccagaaaagtcatcttccttccctgagttaatatcacattctggtgacctaaatttttacttaaacgtcagaagtgccactaagagtggaaccaataatgagaatacttctactttagatgtcccgcattcagaagagcaagcattatctctttcaaccagggctaaggttgacaaactcatagaaattcatcctgtcagcccctcaaatcttattcaaggccttatagaacaaatccatgcaagctatacatctgctctgcaagaaagcacatattggaggcattctttctcagatgagcaaggtttaggaatctcaaagcagaaacttcttgaactgataacgggagaaggttcagaaggctcgtacaatcactgcgaacacaaagataagatggaactcattgtactgtatgcattaaagcaggttgcatattacttatgtttctttggtctgcatgcggcccatttgtacattagcaacctgactagaagcttggaaaacactcctgagaggttaaaacatattctatggtccatttctgaagcacagaggaaatctgagaggcaactgtttgaatctcatccgtcattgtcatgcattgagactatcctgagatctaataaacaaatcgaccaaaagatccttatagttgctgatagagctttctggctgccactgggtcaaaagctagcatccatgaggatgacatttgttgagtttggacaaaaccctgcaacaacttttgtggatctggtgaacaagacaaactctacagcttgggtgctggaagaattactgaaatcagattgcattctgctagataacaagtaagtccatttgataaataaaccaagccaattttctttccaattccttgcttttcattttcttattacaaatcaacttcaacaagcagataggctggttcttgggggttagctagttatttgctgtacctttttctactgtacaagaattagtgcaggatttattgaattcattctggtgagctaaatgaatgtgttacattaacagtccctccatgtttgccacaactttcatttcttagtgcatggagtcatggacatattacaagacgatcatgtttttagaagtagcttgccctttaagaaggatcaattgccttgtgagccactgagtcatcttgcactggttgttcatattgttgatcaactgtggttagagtttagacatatttttggggtcttttttacaataacttaaatgtaccagaagttcattggctctttttgtcaaaaaaattgtttctatgcacagtttagtttttgcttgtctgatattaaatattatgccatatccattcttgtcatcattttgaaggaacattccagcttcattcccttttgacaagtttggcatcatactggaatatggaggcccgaataaatcatctaccttgttatctctcgctcctaaattagatggtttgccacctctgcatttcctctatgtcaaagttgatggcaaggactttccagctgctctagtcgaggacaaccataaagaccaggatttgaaatctacattggtgattatcactcactccatgctgccatttattctgttgtcatatgccaatcatgttgtttattattaagccagcctttgtatgtgttggggaggggggcactacatgaaaatttttatatcttgtacacacagctcattgtaatatgaaacacttagtctcagctctgtaatcataacttctatccattgtagttgagtacttcaattgagcatgagtttcctgcatgatcttgttagagggaaaaccatacaaatgagttttttccccacatatttgtttttgagggcctacacttagtaatagggcagtaggtgtttgtagcaaatgatcaacatggaacatcctaacttcctaagaatgcttcactatttgcaggataaagttttgcttacacttcagaaggatttgcaggagaggatgaataaaatgcgtattgttgattcgttaaacttcataccagcaacaaatcaactgcaaggtcttcaagaaaaacggagcaaacattttgctgctgatgctacaaaagaactgcttccagatgatcaaccacacagattacaaaatcttaacaagaagaatacttttgattcacataacgttgtgcttgctgatgaacagctacatatacagcaaacactgagtaataaacctgttgtcaattcacaatgtgtacccacagttgagaagagtagctctacttcttctgtatctgccaatgtgctgaaagaccctcaagagaatcagtccactactgacttaccttcctgtgtgaaaaatgactgcatcatgccaggaagactgtccgtcccagatgtagtgatagttgtaaatactggaaatcatggaaagacgatgcttgtttcgcgaagatcatcttatcagcagatactagctctggagaaaggaggaatgcaggtcgtggagcgagatattgatctgcctgtggatctgatactcagtgctgctgtctgcctagtatggtatgagactgcgctctttgaggccaatgaactaacaacatcagcagagacatctggtataaaagaaaatgtagagaatattgcgaccaacattctgatgtcagttagtttctctttcactggctgcatcatggtaattaattttgtatccctctagaagtatttactttttcgtatatagttagcatcacaggccattgctatgttattgatgcaaatgcacctgtctgttttggtttggtgtgaatgtgataattcttgatctatcataagagaacagtttccttgtacttttgcaggtctttgagggagaagctgacttcctttctgctgtaatggactcatctgattcattgtatactgcagctgctagtttggacatgaacttgcagctgttcttctcacacacacccaggtcaacagatgaaataattctcaattgcattacaaatgtgactagctgttataaagctcctcttccagatatacctgaatcagaaagcctggctgaatcatttctcacaagtttcccttccatcaatcccgtgtctgcatatatgttactttcttctggaggcagccttgtggagttcctcagttggccacatgagcgccgtattcaagcagttggaaagtatcttttgtctccaaagatcatttccctatttaatgctttgtgcaaatttggtgagttaggtgaatcaaggtctgtaatgactgaatgctcttcagtcgattcagatatcagtagtgcattcctgcagtctccgaggaaaaggaaacagcgttcattgcaggcttgtgcagtaccaactaataagctcctcttttctgattctctaaaccaaatacctggtgactatgcagaacatgctgaggtattctcaccttctaagttgaggaagttctctgacatggataatacaattcccgagctcccagatgtctttacattcgacgaaagtttgaatatgagaagtgagggattctcttatcaacaaaagaagcatgatgtggatgcaatacctggtaatcaagtcattaatgatgatttcagcaatggattgacaccaaataatcaagcatataacagaaggactggcaatatggtggacacattcgacttaccctggcaacctgaatttggtggtacgcatccaagcaaaagcacttttcacacaagcagaccatcttgcagcagaactcatagcaatccagtattttcaactgcatttgagatcaacgatgatcctggtgagtggaacatttcaggaggtacaaaacaaacatggaaggggcttgcacatggaggtactgtagacgactcttacagatatgatatggacaacagatatcatgaaccaagagatgaaattatgcaacatccagcaagttcgcttgcttttcagaaactagattttggtagccatgcaacttcacaggggtcatgctgggaaattgattatctaaggcaaatgagtgcaaagagaaaagcacgtcaggagagatctagatgtagtaattcaccaggtatgtcgatcccaagaatgagagatagcaactcaaagattctaaatcctccacctaaagaatccttcagataccgaggagatagagacactccttcgagggaccagagcccttcaattgggactcagcattatgggaaaggcaaggaaggagctaaagcacagaatcgcagagcaaggaaagatttcaatgtacaaccaacaagtcacaaaaagaggatagaaccgtccattgatccaacatggactcctattgacaagagagcaagacaggtacgtgctgaaacattttctgatattgtgaattttctagtgtttgagatgcaatgaagataaaacctgaataattttgtgcagaaactttcatttgttacatatgggaaggaaaaacagagcaagctggtctggcgaaaccagaacagccctggtgttgggtgtggcttccggaaaagattccgagaggaaggtacgtagattatcatgtcaggtcagataagctccctgtgccctatcctcaaatagatttcgagaggaaagtacgtagattttcatgtcaggtcagataagctccctgtccctgtatcctcaaatttaagttgctggtgttttattttgtaaagatattccatgaagatatgtctaaactcttaacttac</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0642600, RefSeq:Os02g0642600