Os02g0654400
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Contents
Annotated Information
Function
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Expression
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Evolution
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References
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Structured Information
| Gene Name |
Os02g0654400 |
|---|---|
| Description |
Transcription initiation factor TFIID component TAF4 domain containing protein |
| Version |
NM_001054146.1 GI:115447662 GeneID:4330186 |
| Length |
6763 bp |
| Definition |
Oryza sativa Japonica Group Os02g0654400, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 2:27283362..27290124 |
| Sequence Coding Region |
27283687..27283862,27283959..27284208,27284277..27284342,27284825..27284968,27285051..27285107 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008395:27283362..27290124 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008395:27283362..27290124 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atgtctacccaattaacggaacacgatcaccagccagaacaagaaccaccacattctgaaaaccatctgaaacaggcagagccaaacagcttccagttcgctgaaaaggaaacaggctatgctggtctacagaatttcacaggccccaaggtggatgtgggtcagacttcaggagagcagcagcatgtaaaacagatggtcggtcagcaagcaccacctggtgcacaggacgcaaggaagcggggataccaaccgtctataccatttaatatgttgattccaatcctacaggctcatcttgacagagacaaggatatgcagcttcaaactgtgtgggcaaaacttaggcgtaatgaagttcataaagatgatttcttgagagttatcaggaacatcgttggagatcaaatgctaaagcaagcagcccataaagtttttgcacagatgcaagcccaggcacagagaagtggccaggcaaatgcaaatcagcaggctaatgcaaatcagtattctttacaatcccaagtatcttccagcggttcagctcaattacatgatcagcaagttcacgtgtccaccacacctaatcagggccaaaaaaaccaagcattgtcttcatcccaaacctttgtgcaatctggcactcaggtgcagagcagtatgactgctcatgataattccatccaacggccagatgcaaagggaatgcatgttacgccgaaccgacctcctgttatgaactcagcaatttctgcacaaacaatgaacaaacagcagcaacccacacaagtccagcaagcctcacagcaaatatatggaacaactaatcgccctgaccagccatacactaggccaatcggtggttcaacacctcttagctcactgagttcagaatcagaaataaggccttcctctcatcctgcaaaaatggagattcttccttctcatccaatgacacaacaaaatgcagctgcgcagcaaatgcaacagaacaaggatgtgaagactaatgcttctaatccaaggagtaatgcaaagcaagattcggggacaggtaagggtcgtgcagttggcactggaggttcttcaacgaaatcgcaagggaagcagggcccccctaacttttccacacctcccgctgcaaagagtaacaagaaaactgctgggcagaagaagtcattggaaacatcaggctctacaccaccccctcctagcaaaaagcagaagacttctggaaccttccaagaacaaagcttcgatcaactaaatgatgtcacggctgttagtggtgttaatcttagggaagaagaagaacagctactctctgccccaaaggaagagagctgggcctcagaagaagcaaggaaaattgcacaggaagaagatggcaagctttttctgcagaaaggcccacttctgaagaaactagcagcaatcgttcctaaatgcaatttgaagagcattggtggtgatgttgagcattgtttatcaatgtgcgtggaggagcgattgcgaagatttatcagtactctcataagagtttcaaagcagagaattgacacagaaaagtctggccatcaactagttataacatcagatgttggccggcaaattttgcggatgaaccagaaagctaaggaagaatgggataaaaaacaagcagaggaaacagacaagaacaagaaacaaaatgaggttgacggcggtggcactgtggaattagacaaggaaaaggaggaaactcgttcaaagaatgcaaagcccaacaaagaagaagatgacaagatgagaacaacagctgcaaatgttgccgcccgacaggctgttggaggaagtgatatgctgtccaaatggcaactgatggctgaacaagctagacagaaacgcgaaggccttgatctggctgcttcttcacagcgcgggacagcttccaggtcgcatatggctgggaaaggtcccacagatcaccacgaagcttcgaagaggacccattctgcagcgtttggaactggaggcatgaacaggcaaggcaggggtccatttgcagcgtctcatccaaaaggaccacaaagaactatttctatgaaggatgtaatatgtgtcctcgagagggaacctcagatgacaaaatcgcggctgatatatcggctctatgagcggttgcctggagattccaccagagattag</cdnaseq> |
| Protein Sequence |
<aaseq>MSTQLTEHDHQPEQEPPHSENHLKQAEPNSFQFAEKETGYAGLQ NFTGPKVDVGQTSGEQQHVKQMVGQQAPPGAQDARKRGYQPSIPFNMLIPILQAHLDR DKDMQLQTVWAKLRRNEVHKDDFLRVIRNIVGDQMLKQAAHKVFAQMQAQAQRSGQAN ANQQANANQYSLQSQVSSSGSAQLHDQQVHVSTTPNQGQKNQALSSSQTFVQSGTQVQ SSMTAHDNSIQRPDAKGMHVTPNRPPVMNSAISAQTMNKQQQPTQVQQASQQIYGTTN RPDQPYTRPIGGSTPLSSLSSESEIRPSSHPAKMEILPSHPMTQQNAAAQQMQQNKDV KTNASNPRSNAKQDSGTGKGRAVGTGGSSTKSQGKQGPPNFSTPPAAKSNKKTAGQKK SLETSGSTPPPPSKKQKTSGTFQEQSFDQLNDVTAVSGVNLREEEEQLLSAPKEESWA SEEARKIAQEEDGKLFLQKGPLLKKLAAIVPKCNLKSIGGDVEHCLSMCVEERLRRFI STLIRVSKQRIDTEKSGHQLVITSDVGRQILRMNQKAKEEWDKKQAEETDKNKKQNEV DGGGTVELDKEKEETRSKNAKPNKEEDDKMRTTAANVAARQAVGGSDMLSKWQLMAEQ ARQKREGLDLAASSQRGTASRSHMAGKGPTDHHEASKRTHSAAFGTGGMNRQGRGPFA ASHPKGPQRTISMKDVICVLEREPQMTKSRLIYRLYERLPGDSTRD</aaseq> |
| Gene Sequence |
<dnaseqindica>6263..6438#5917..6166#5783..5848#5157..5300#5018..5074#4889..4944#4656..4791#4480..4567#4275..4378#2577..3242#2325..2420#1436..1783#ggttggaacacaggtcgggttcagagtggcaatcagtaggtcgtcccagggccagcgccgatccccatccgtcccgcgagcaagcagaggcggcgccgtcgctcgtcctgctgcttccgccgcatcctccgccaccgccgcctgcgccgatcccccaaccgtcccgcgagcgagcgagcgagcgagcaggggcgccgtcgttcgtcctgcttcttccgccgcttcctggttagcacatcctctttcccatctctctctacccaagcactctttatatatatatatatatatcgaatttgcgttaaccctagcttctgttctagaaatttgccttaaccttcacactaataacagtttgtttgttcccaaaaagtttgggggttcatctgaatccccatgtcccatgttagatccgcccatgttgccgcctgctgcgtgttgggaacctgctaggttaattgttcactaacagctagtagtagcatgaaaacactctcgtgcttccctgttgctaagcgatcttcttgactcaataagagagagtcatgtcttgattgctagggcatgtctggttgtttgctgattcgggctatagctcgccgaggtaaaccgaagcgaacctttccttggaaagctatttggttggtttgctttgcacactagcttttcactcggttttgcataaaacttgtgcgagagacgagcttgccatcaaaggcgagccaaatgggctctcctgcgcgagccagttttttcttgcgcgatatggcttgatttttttactgctaccaaatgcctctcctcactgggcaaggcttagatccaaacgagcacgtgctgtcttgtaccatattgttcaagtagccatgcactgaagtctgttggtaccctggtagaggtgaccagactgtggagaggggtcaatatttagaaatgaatttatttggtgctaaacttacccaaaaatagatgcccttttacaatacattcaatcaaaccttaaaaaccttgtccaccaataatacccaaaaatagatttgttatgcgaaaactgcatatgattaaaaaacaattgttccttaaactgcatttgcacacctgtgtgctttgagttggtctcttgttttctttgctttttaaaacttgatgtccattttacttgcaggttgctgttcctatggacttcacatatcatatcttttgaatattgtgatcaccccattttcttgttgagggtacatgaataatctccatttttgcatttcaggtactttaccccagaatagcagtgatgtgtcaaaatctatagttggtcaggtgcaagcagaagagcaggaaggaaatggccaggcaaaccaacaagcagtgcagcaacatatgattttagcaggccagttgtctcagccaaaatcgttaactgaaggtttggaaaataatgtctacccaattaacggaacacgatcaccagccagaacaagaaccaccacattctgaaaaccatctgaaacaggcagagccaaacagcttccagttcgctgaaaaggaaacaggctatgctggtctacagaatttcacaggccccaaggtggatgtgggtcagacttcaggagagcagcagcatgtaaaacagatggtcggtcagcaagcaccacctggtgcacaggacgcaaggaagcggggataccaaccgtctataccatttaatatgttgattccaatcctacaggctcatcttgacagagacaaggatatgcagcttcaaactgtgtgggcaaaacttagggtgcgcttttgtctcactcctctgttgttagctgctgtttttcatcaatttgattggctagggaaactacacagccttgttgaggcgaagtggggagcaaagttaacctgcttcgcacatctattaatttgttcaaagttatatatcctctatgttgttaatatcgttgttagacttctaaaatttgttgctaaaattaggacttagggcgtgtttggtttgtggccgaacccaaccaagccaaaagaaagacatctatttggtttgtggccaaaaaattggcattgccaaattatttcgcttagtacactacataaatgcaactttggtagtaaaccaaacaaaagcctagccaattattgccatttttaatccatttgaataaaagaggcgcctgggatctttttttttctttttttttttggggggggggagggtgagataaatgaatgctagcaaagatgcctcatcatttaaaatggagtttgcaccatttccactgaaatgaaactaactcagctgtaccattctatgtttgtagcgtaatgaagttcataaagatgatttcttgagagttatcaggaacatcgttggagatcaaatgctaaagcaagcagcccataaagtttttgcacaggtgaacggattgtgttaacttcattgctgccatttgtttccctgataactgtttaataaatatcaatcaagtttgatgaaagtgaagtcactcttaattgtcatgttggacgagagatcactgagtaggaaatatctttatttaatttgttttcagatgcaagcccaggcacagagaagtggccaggcaaatgcaaatcagcaggctaatgcaaatcagtattctttacaatcccaagtatcttccagcggttcagctcaattacatgatcagcaagttcacgtgtccaccacacctaatcagggccaaaaaaaccaagcattgtcttcatcccaaacctttgtgcaatctggcactcaggtgcagagcagtatgactgctcatgataattccatccaacggccagatgcaaagggaatgcatgttacgccgaaccgacctcctgttatgaactcagcaatttctgcacaaacaatgaacaaacagcagcaacccacacaagtccagcaagcctcacagcaaatatatggaacaactaatcgccctgaccagccatacactaggccaatcggtggttcaacacctcttagctcactgagttcagaatcagaaataaggccttcctctcatcctgcaaaaatggagattcttccttctcatccaatgacacaacaaaatgcagctgcgcagcaaatgcaacagaacaaggatgtgaagactaatgcttctaatccaaggagtaatgcaaagcaagattcggggacaggtaagggtcgtgcagttggcactggaggttcttcaacgaaatcgcaagggaagcaggtaattcaattcctgcatcatctcacctatctgtcttatgatatattcaaatcaaatttccagattcatatgcaacccaattcctcgatccatctaaatagtctgaattaccaataattttcatttatgcaattccccatgttacaaagggatagttacatgcataaaaaaattcctacaagtttatttgcattccatcacaattagtttttgttggactcaacacaattaattttgatgaacgccataataaacggaaatgatcaatgttagtgagatctgatgccataattcttcaggtagaagattgatcaaacttacctaggatagcctgcacttgattgtatcaatatcttggaggaatggaaatatgtagtaccagaacagagaacctccactgttttgaagttttaatttttgctgttacactaagttgcatacaaattcactcagtaattgccctttttatttgctcatacgaccactcttatcattttgagaatgtggccatctgtagtacatcccgctgttacatgcagggttatttcattgttatcaaggtgtttactaagtagtggccacttgccccaccatctgacacctcacctgggtccctgtgtctggacagggccttaacacctgacacaaaaaataggggatgggggattggttcatggagagggctaaacattagtcacaacttttgggatctttgtttttctgccatttctcttttctcaatctatttcactccagtttcctctactttctgctgcatcctggtcaaccaggtgatggcttgagtgcttttttttttgtgaaggccttattatcctatgaaaataattttgtgaaggccttatttctgaggagtaacatgtgatttagtcagaaaatggctgaaagtgtatttggttgatttccagttgtatggctatgcatgcatacttcaataggttcacagcaaccatgaaactattatatgccttctcacatgtagctgtacgtataattatctgactggactgtcagggcccccctaacttttccacacctcccgctgcaaagagtaacaagaaaactgctgggcagaagaagtcattggaaacatcaggctctacaccaccccctcctaggtttttgtagttcatttcaccccatatgctctttcattagcagattgttcagtacattcaatttttggataatcctaaggtgatttcctttttgtcactagcaaaaagcagaagacttctggaaccttccaagaacaaagcttcgatcaactaaatgatgtcacggctgttagtggtgttaatcttagggtacgcatctccctctatgattctcatttgatgtttgttttatttttgtatatcctctttatattccatcactgttttactttaacaggaagaagaagaacagctactctctgccccaaaggaagagagctgggcctcagaagaagcaaggaaaattgcacaggaagaagatggcaagctttttctgcagaaaggcccacttctgaagaaactagcagcaatcggttaggaccttggaatttcatattgacactgtaaaacaatattacatggcaatatatactatcgaagcaatactaactgatgaaacatttttcacagttcctaaatgcaatttgaagagcattggtggtgatgttgagcattgtttatcaatggtgagctattcatatgattgtccttaagaattttttcagagtaatgcagtatatctaacataaatgccttcagtgcgtggaggagcgattgcgaagatttatcagtactctcataagagtttcaaagcaggttattttacacaacattcaattactaaatttatggtattgttgttattttgatgtactaaccatgattttcttattgctagagaattgacacagaaaagtctggccatcaactagttataacatcagatgttggccggcaaattttgcggatgaaccagaaagctaaggaagaatgggataaaaaacaagcagaggaaacagacaagaacaagaaacaaaatgaggtgttccataatatctatgttatttgcttgtgtacaattttgcatgacatgcttgttccgttgaactatcatgttattactatggcacatcatcttcagttatttatcactacctttatgctgtcctaagtcctaaattattatttgttgttcttttatccatttttatactgaaatatctaaacacctctctctctctctctctctctctcacacacacacacatgcatgcctaccccgcacacatcccacactctcctgtacaacttatcccaaaggaaaactgaacgatttaattaatatatttctattttcaattttgacacgaaacagtttataagcagcttcacatgaaaagggactgtagcagatttctttgtcttctcactgttgaagatcatacattttttatggttacgaaaggtccatcaagttgcgatgttgcagttagtcattctaattaaccatatccttacacacaggttgacggcggtggcactgtggaattagacaaggaaaaggaggaaactcgttcaaagaatgcaaaggtaactttactaatgtgatatttaggtttggtggcagcccttgttttcctaatatgcttgacctgtagcccaacaaagaagaagatgacaagatgagaacaacagctgcaaatgttgccgcccgacaggctgttggaggaagtgatatgctgtccaaatggcaactgatggctgaacaagctagacagaaacgcgaaggccttgatctggctgcttcttcacagcgcgggacagcttccaggtcgcatatggctgggaaaggtcccacagatcaccacgaagcttcgaagaggacccattctgcagcgtttggaactggtaaatcagcaaccttgcattgatttattttccgccctttcatattatgctagaaaaagctgcaacttcagtatccatgtcatattgctattgcaggaggcatgaacaggcaaggcaggggtccatttgcagcgtctcatccaaaaggaccacaaagaactatttctatgaaggatgtaatatgtgtcctcgagagggaacctcagatgacaaaatcgcggctgatatatcggctctatgagcggttgcctggagattccaccagagattaggcttgaatcgtcatttatttggtgtatgtatgcacatttgtgtaacaatatcgagctataacttattgctctactccttccattttctctggtttggagttgcgaggtgtgggtgggtgtgttgggggaggggggggggggacaaaactagtgtaacaagttagctgacatggtactcttagaatatgaacacataagatgtacttccaaacaaaatggtcatgtaaagattatcacagtgtaacagatggcaagattgcccattgctgcctgctggtgcatgcgcttgctcattgtactgttataattcagtgagataatttgg</dnaseqindica> 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