Os06g0721600

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Revision as of 09:35, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os06g0721600| Description = Protein of unknown function DUF544 family protein| Version = NM_001065141.2 GI:297606524 GeneID:4342094| Length = 73...")
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Gene Name

Os06g0721600

Description

Protein of unknown function DUF544 family protein

Version

NM_001065141.2 GI:297606524 GeneID:4342094

Length

7300 bp

Definition

Oryza sativa Japonica Group Os06g0721600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:31522087..31529386

Sequence Coding Region

31522087..31522129,31522531..31522608,31522953..31523018,31525008..31525055,31525141..31525304
,31525459..31526314,31526406..31526519,31526586..31526729,31526808..31527037
,31527317..31527457,31527543..31527620,31527705..31527786,31527861..31527915
,31528015..31528138,31528279..31528372,31528449..31528525,31528604..31528713
,31528789..31529386

Expression

GEO Profiles:Os06g0721600

Genome Context

<gbrowseImage1> name=NC_008399:31522087..31529386 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:31522087..31529386 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgggatccaactatccgcggcgagatcctccgcccgatcggcaggggcaggttccaccgcggggagatcctccgcccggtcggcagcggcaggttccaccgcggggagatcctccgcccggtcggcagcgggtaccgccgcggcttctgatcactcccttccgcgacataggtcagaggctgagcaccggtcaggccttcaagccgatcggtcaggtgtccgtcagccggatgttggccggcccgcagttgttcggccggctagcttcgcagctcttcgaggttgaccgctcgctggccttctctaccgctggtgactccgcagaggagggtgatgaggaggacgaggagggcgaggaggaggagaccgctggtgactccgcagaggagggtgatgaggaggacgaggagggcgaggaggaggagaccgaagaggagtgtgtacagaaggatgaaggaggggagagcactttgcctccaccgcaagtgcctcgtgtgcccagagatttttgtgaaacaaaactcatatcctttctgggccgggggtataagatcatcctccagtccaagaatggaccctgctccttgatagccatatgcaattatctaatccttaccaggaaactctccttgccaccatccatgacaattgtttaccttgattatttagttgaccgtgtgtttagtcaagttttcagcaaaatgaaggatgacagctataaaactgcacaggcaacggtggaacaaacggctacaggactagatattgatatttattgcacaagtgtcgacgggtttgaggacacccctcagtatgggctttttagaatcctggatatccctttatatcatgcctgggtactagacatgaacaatcaggaagacaccattttattgaatgcagttgatggacgttcatacaatcagctgaatatcgatagggctaaatacaactcaaagaaagatgctgattttatgatagatgctgctgaaactagaagatatgagttgattcacacgttcttgaaagataatcctggacaagtcacagagtttggtttacacactttgaaagcagcaactcctgataggaagttgttcattttctttcaaaacgagcacttcaacgttgtatacaagtaccatggaagattttttgttctggaatcagatgtgggcttccggaactaccaaaatatttggcgatctgttgattctcctggtgaaagcggtgtgttggttcatgatatcacaatctcaagggaccaacattctgtgttgaaaagtggcaattattttgaaggtgctaagcaaagctttaagaagaagcctcacagtgccaggcaaacccagcatcatagcgtaagctcgtcacttgagtcaagccaaggtcctcctccagtacggcattcccgtatggcaggagaacatggtagcagctccagtgttaagccaaggccatcacccaccaatgcgcagctagaaaccaggcctccctctcctggaacagtgagagcagattttgcgtcttatttcatgagtggaaaagaccaaaagctggaacacatgttcctcgactttttaagaagcttcgagcggaacaatataccatattatggagcaattgttgattctatgaagaccctgagctctcctgagatgcacatacatttcgatcatatttggagttatgctcctgaactcgcacatgacttgtgccaatgctacccaaggattcagaagaatcttgaaaatgctgtgcgcacatttattcatgatttgaacttaccaggttttcattgtgaaaatccagtaatatgcatatgtgacatgcccaaaccggatagatggattccgttgaggacatttctgaagctacgtgggtatcatctgaccaagccccgccatattagatgtgatggttttttcctgccagtgatagataccacccagattgggagaatcattttaaccaatctgttgacaatgataacaaggtctcataagggaggtagatcttggaatggccattgggatttggatcatgttatggtcagtgactcgttggatgttaagatcgatttgccatgtacttatcaagcggcatgtaaaacagaggcacatgattttcttagagttgctactgacgttcttccagagtatgaggtaggtggtaaatggccaggcctttttaggcatcttgacaagtcacttagaaattacattgatcatctgaggtacggcagtgcgatgctaagaaagtttcaaagatttatcaccatccatcctgcactgaagtcgtccttgacaagattacaaataattgataatatttattcagcccatcaagcaacaactggccaagtgaagagattacttcaatcaattctgaactctgtgacacttcgacaagactggagagtccgatgtcaaaagcaggatggtagtgtatcctctgtctccccaattcatactgttgtatatgaacaccacagagctaagatggaaaaaagtgaatccaatgaacaaggagatgagaatgcagaaaaggaaggtcatgaacttggaggctatgttgggaatgatggtggaaatgaagaatgccctgaacaacgtgaagagtatgaaccctttgagaattcagtggaagatggcatggtttacttacgccatgttcgtcatcatggttggaaaggctcaaaagacaatatgggcaaacaacaattcttgcggctgtctgatttggaactggtaaattcaaattccttggatgaaattttacctgcaatggtggaatgtctaatattgcataaagatgattaccaccacatgtatgacaaggatatctatgatagagttttgggatggattgatgaaatattggagaactatgaactccttgagttccctaaaagttacggcatagattttcctgctataactccaacaggtcacgatgatgccttccccgatcctcacaggagtgctccaccgagtggtcattataatccaattggtccaccagatgtgccagggcttgagccttcttgctctgcgaggcgtccaaagcaggaggccccccttcaaaggccaccttcctaa</cdnaseq>

Protein Sequence

<aaseq>MGSNYPRRDPPPDRQGQVPPRGDPPPGRQRQVPPRGDPPPGRQR VPPRLLITPFRDIGQRLSTGQAFKPIGQVSVSRMLAGPQLFGRLASQLFEVDRSLAFS TAGDSAEEGDEEDEEGEEEETAGDSAEEGDEEDEEGEEEETEEECVQKDEGGESTLPP PQVPRVPRDFCETKLISFLGRGYKIILQSKNGPCSLIAICNYLILTRKLSLPPSMTIV YLDYLVDRVFSQVFSKMKDDSYKTAQATVEQTATGLDIDIYCTSVDGFEDTPQYGLFR ILDIPLYHAWVLDMNNQEDTILLNAVDGRSYNQLNIDRAKYNSKKDADFMIDAAETRR YELIHTFLKDNPGQVTEFGLHTLKAATPDRKLFIFFQNEHFNVVYKYHGRFFVLESDV GFRNYQNIWRSVDSPGESGVLVHDITISRDQHSVLKSGNYFEGAKQSFKKKPHSARQT QHHSVSSSLESSQGPPPVRHSRMAGEHGSSSSVKPRPSPTNAQLETRPPSPGTVRADF ASYFMSGKDQKLEHMFLDFLRSFERNNIPYYGAIVDSMKTLSSPEMHIHFDHIWSYAP ELAHDLCQCYPRIQKNLENAVRTFIHDLNLPGFHCENPVICICDMPKPDRWIPLRTFL KLRGYHLTKPRHIRCDGFFLPVIDTTQIGRIILTNLLTMITRSHKGGRSWNGHWDLDH VMVSDSLDVKIDLPCTYQAACKTEAHDFLRVATDVLPEYEVGGKWPGLFRHLDKSLRN YIDHLRYGSAMLRKFQRFITIHPALKSSLTRLQIIDNIYSAHQATTGQVKRLLQSILN SVTLRQDWRVRCQKQDGSVSSVSPIHTVVYEHHRAKMEKSESNEQGDENAEKEGHELG GYVGNDGGNEECPEQREEYEPFENSVEDGMVYLRHVRHHGWKGSKDNMGKQQFLRLSD LELVNSNSLDEILPAMVECLILHKDDYHHMYDKDIYDRVLGWIDEILENYELLEFPKS YGIDFPAITPTGHDDAFPDPHRSAPPSGHYNPIGPPDVPGLEPSCSARRPKQEAPLQR PPS</aaseq>

Gene Sequence

<dnaseqindica>7258..7300#6779..6856#6369..6434#4332..4379#4083..4246#3073..3928#2868..2981#2658..2801#2350..2579#1930..2070#1767..1844#1601..1682#1472..1526#1249..1372#1015..1108#862..938#674..783#1..598#atgggatccaactatccgcggcgagatcctccgcccgatcggcaggggcaggttccaccgcggggagatcctccgcccggtcggcagcggcaggttccaccgcggggagatcctccgcccggtcggcagcgggtaccgccgcggcttctgatcactcccttccgcgacataggtcagaggctgagcaccggtcaggccttcaagccgatcggtcaggtgtccgtcagccggatgttggccggcccgcagttgttcggccggctagcttcgcagctcttcgaggttgaccgctcgctggccttctctaccgctggtgactccgcagaggagggtgatgaggaggacgaggagggcgaggaggaggagaccgctggtgactccgcagaggagggtgatgaggaggacgaggagggcgaggaggaggagaccgaagaggagtgtgtacagaaggatgaaggaggggagagcactttgcctccaccgcaagtgcctcgtgtgcccagagatttttgtgaaacaaaactcatatcctttctgggccgggggtataagatcatcctccagtccaagaatggaccctgctccttgatagccatatgtgagattttgtttgttgtttatactatacccgctgataaactgtcccatgtagcttaactactctgttttgcaggcaattatctaatccttaccaggaaactctccttgccaccatccatgacaattgtttaccttgattatttagttgaccgtgtgtttagtcaagttttcagcaaaatgaaggttcgatctgatccacttatcaaaacaatatattccatttttttaattgaagattattaatcacattgcaatgtgtaggatgacagctataaaactgcacaggcaacggtggaacaaacggctacaggactagatattgatatttattgcacaaggtttgtggttaagcgagttcttaagcaataatatagcctccatttgtatattttgatgtgtaattggtatgcgcagtgtcgacgggtttgaggacacccctcagtatgggctttttagaatcctggatatccctttatatcatgcctgggtactagacatgaacaatcaggtatgctactgggagatgtcttttagtatgattgaaccatggctacttattacatggattaatttagtgttgtagtcatgttaatattttttttcttgggtttttcctaattttttcttctgtggtatgtttgtgaacaggaagacaccattttattgaatgcagttgatggacgttcatacaatcagctgaatatcgatagggctaaatacaactcaaagaaagatgctgattttatgatagatgctgctgaaactagaagatgtaacgatcttacatttttcacctgtcaactatttacggatgcaaatatgtttctttctttgatcgctaatgctctgtttttaaattgtttatttgtagatgagttgattcacacgttcttgaaagataatcctggacaagtcacagagtttgggtatgcatgctagctataggtaaatacaattgtcattttgtttcttctattgacatttttttttaaaatcacagtttacacactttgaaagcagcaactcctgataggaagttgttcattttctttcaaaacgagcacttcaacgttgtatacaaggtattgtaatttacgagttgtgatacctgcctttttttaaataaacttggtatgctagttttcattctattttcttcttttcagtaccatggaagattttttgttctggaatcagatgtgggcttccggaactaccaaaatatttggcgatctgttgattctgtaagcccttagtaattctgccactttctttgattaagcagtgcatttttttaattactgaccttttttgtttaaaaataattagcctggtgaaagcggtgtgttggttcatgatatcacaatctcaagggaccaacattctgtgttgaaaagtggcaattattttgaaggtgctaagcaaagctttaagaagaagcctcacagtgccaggcaaacccagcatcatgtacgtttttgttgccttaaatgttaactgctatcccatgcttagcacattgttgttctaaatgtagaattgccatgttacttcagcatgttgctagaaatatgcattcctttgattgtaggattttagtggcaaatctactgtgttcaaagccacttctattgtcacggtctttttgatgttacctgtaaacactcatattgctataaccatgtaatatattcatctagttgatttgatctagcaaaatgccttcatcattttttttctctgttctagagcgtaagctcgtcacttgagtcaagccaaggtcctcctccagtacggcattcccgtatggcaggagaacatggtagcagctccagtgttaagccaaggccatcacccaccaatgcgcagctagaaaccaggcctccctctcctggaacagtgagagcagattttgcgtcttatttcatgagtggaaaagaccaaaagctggaacacatgttcctcgactttttaagaaggtaaaaatctatcattcttaggaaatatgttttatggcttatgaaatcaaagcagcatctgatctgttttttaatcagcttcgagcggaacaatataccatattatggagcaattgttgattctatgaagaccctgagctctcctgagatgcacatacatttcgatcatatttggagttatgctcctgaactcgcacatgacttgtgccaatgctacccaaggtgactttcttgtcctagatcatcttcatatgagagtcagtgtcttaatttctatattttttgcaggattcagaagaatcttgaaaatgctgtgcgcacatttattcatgatttgaacttaccaggttttcattgtgaaaatccagtaatatgcatatgtgacatgcccaaaccggataggtattttacttgagtccatttaaatttggtcaataacaatggcttgatgttaacattattaggaataaataatagagtactatatttgcagatggattccgttgaggacatttctgaagctacgtgggtatcatctgaccaagccccgccatattagatgtgatggttttttcctgccagtgatagataccacccagattgggagaatcattttaaccaatctgttgacaatgataacaaggtctcataagggaggtagatcttggaatggccattgggatttggatcatgttatggtcagtgactcgttggatgttaagatcgatttgccatgtacttatcaagcggcatgtaaaacagaggcacatgattttcttagagttgctactgacgttcttccagagtatgaggtaggtggtaaatggccaggcctttttaggcatcttgacaagtcacttagaaattacattgatcatctgaggtacggcagtgcgatgctaagaaagtttcaaagatttatcaccatccatcctgcactgaagtcgtccttgacaagattacaaataattgataatatttattcagcccatcaagcaacaactggccaagtgaagagattacttcaatcaattctgaactctgtgacacttcgacaagactggagagtccgatgtcaaaagcaggatggtagtgtatcctctgtctccccaattcatactgttgtatatgaacaccacagagctaagatggaaaaaagtgaatccaatgaacaaggagatgagaatgcagaaaaggaaggtcatgaacttggaggctatgttgggaatgatggtggaaatgaagaatgccctgaacaacgtgaagagtatgaaccctttgagaattcagtggaagatggcatggtttacttacgccatgttcgtcatcatggttggaaaggctcaaaagtgagttttaatctctgattttcttttttgttgtatttatcaatgcacatgcatatgatagtttttgctgtagtgtaccatttgattaacttctatcatggtatcgtaagtgctgctataaacactcttaactaaaaagtgatttcatttgaaggacaatatgggcaaacaacaattcttgcggctgtctgatttggaactggtaaattcaaattccttggatgaaattttacctgcaatggtggaatgtctaatattgcataaagatgattaccaccacatgtatgacaaggatatctatgatagagttttgggatggtaggtatttttcttcttctcaattgtttgatttcaaaaaagaactgccttgctctctgttatatttgcattatttgttctgcaggattgatgaaatattggagaactatgaactccttgagttccctaaaaggtacgtattcaatactactagactactctacacactattgtgctttggtcttaaaaataataaaatggtagactggtgctgatctaagggaacacatcctatgcacacaaggctttttcgtgtacacaccaactaacaaatatcacaaaaattctggaaaaaaatgtacatgaactttaagtcgtattatatatatgtgtaaaatctcaacttcaaattcattatatatagggggtaacaaaaaagacaattctggcagatttactcttaaaactgtcagagtttttatcttatttgttacgtctaaaatgtattgaatttaaagttaagactttacatataagtgtaacactaatggaaatacatatgtacaatgttttctaggatttttggtctaatttgttagttggtgtgcacggtgtgtatacggaaatcttatgtgcacaggatatgttccattgatctaacatcatcaatatatttcttttagttgttcaaatctaaatattctgctagttaaggaaaatacttgtgaaacatgtaattgaaagtcgaagcttctcaagtaagaaaaaactttaattacgttcattaactggtattctccaaaagtttttctaacataaggcgcttgtgttccagctatgaaaatcaagacctcaaaactactgaacggtatgaccttaaggctaaactcatttctccttttgctttctttgtgtatattcttcattgttgggcttgcgctttcttctctctacctttacacaacctgttatcaaacttaaggggcagtttggcagagctccacctccacctctcctagagctggagcccaacctaacagtttcagctccacccaaaaagggagtgaagttgctggagtgctctcacaaaatgaactagagagttggagttggagtggggttcaggctgctccgcaactatactccaaacccaactctgagttaaatttaagagttggatccctgccaaacgggccctcactatattatttccgctcttgctcaatcattaatgacatgtacacccatggattaacctctgaagaacactggaacagtaggtcataaagataggaatgaaatggcacagtaaatcctttgttttctggaatagatttgctgcagtagccacaagttgggtgattcattttgatgttgccgctagctgtgtcattttcttagactattttggataagttggcaaagcattagtgcaatgctatatgtgaggtaaagactacaaataatgaatgctcgagtcttttgtgaacagaatgccattcgaaggtagcaatgagccaatgattgtgatggattttatctgtgattattactgaaattatctttaatgttttttatgagccatcaaaatttaatgcagtcattttaaggccatactactctttcatgtcttgtatttcttgttattactgtgatactgaactaacattgtcgcctacataaacaaggaaataacaagagaacaatacactcgtgcatattaaataaagtgtttagtgttcatatgtcagctcggcatcaacatgttgaggcctagccagtagagataatatgtacttaaaacaactataaggttactttccaggtttcactggcaactataagcttatttccagttttcactgaatgaagcctttgcttggtccttatatatgaacttgtctgttcagtgcattcatgaaactttgtgattcattagtgacttactgatacatatgtgacgatgtgcgctggatatgaaggttcattccaagcactagtcatatgtaaaaaaaaggtgcaatatgcacctgataattgtagtgctgtgtatgtacatttaatctaacatagttagtagttcattagagtaattagagtggttcatgatattagttcattagttactctaaacatagttatatgatgtgatctttcttgtgatttctgttgtgttacacagttacggcatagattttcctgctataactccaacaggtcacgatgatgccttccccgatcctcacaggttcgtctccaatcacctaaagtataggtaaatcatactcacatagttaatagtttctgtttttgtatgcagtggtattggtggtggcagcagccagcatgttggtaatatgacacccatggaactctcaaaaatatttctttttatgtttctgcatctctacagtcttgttttaccacttatttatacaacagatccaaatgatccaagcttctttccttctaatcccttgcatgtacccttaagtggcacagggtaatccactttttctttttattatcttgtcattttagtacacatgaggtcatttttacttatgaatggactttaatatttgaaaataggagtgctccaccgagtggtcattataatccaattggtccaccagatgtgccagggcttgagccttcttgctctgcgaggtaatatagttgttgaggaacagtatttatacacaatattcttagcaaatctgtaagttccaagattgccagatactgtacttggctgcgtttaaaacccatgaccaacaaatcaaccttctttttcatatacttcaatttctggcccaacctcctgtttccttagcaaaggactatttatatctcacctcctgttgtaacaatatagtaataatgttggattagcactatcctacataattcttatattcccttggcattacaaagctctaaaagagtgtccatttacatctggttaaaactgtcaaaatgattttgggtgataccattttgattgggagttgctcatcctctgatcaacaggcaatgctaacctaatatagatttttctttacatgcaggcgtccaaagcaggaggccccccttcaaaggccaccttcctaa</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0721600, RefSeq:Os06g0721600