Os02g0664000

From RiceWiki
Revision as of 19:20, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os02g0664000

Description

Similar to Phospholipid hydroperoxide glutathione peroxidase, chloroplast precursor (EC 1.11.1.12) (PHGPx)

Version

NM_001054194.1 GI:115447758 GeneID:4330235

Length

2634 bp

Definition

Oryza sativa Japonica Group Os02g0664000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:27816631..27819264

Sequence Coding Region

27816631..27816888,27817199..27817275,27817965..27818026,27818165..27818283,27818694..27818861
,27818955..27818987

Expression

GEO Profiles:Os02g0664000

Genome Context

<gbrowseImage1> name=NC_008395:27816631..27819264 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:27816631..27819264 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgccgtctcgcaccgccccgttcatctctcgcctccggctcctccgaaccgccgccgccctctccccgttctcgtcctccgcgccgccgcggcacagcccccgcatcctccgcgctatccctgtcggtgcgcctcacccgccgcgcgtctccgcagccgtctcgccgctggtccgtccggtcgccgccgggttcgcgctgttcagcatggccaccgccgcctcctccgccgcatccgtccacgacttcaccgtcaaggatgcaagtggcaaagatgtggacctgagcaccttcaaggggaaagtcctccttatcgtcaatgttgcatctcagtgtggcttgaccaattccaactacacggagctgagccagttgtatgagaagtacaaggaccagggttttgagatccttgctttcccatgcaaccagtttggtggacaggaacctggcactaatgaggagattgtccaatttgcttgcacccgcttcaaggccgagtatccaatttttgataaggttgatgttaatggtgacaacactgcacccatctacaagtttctgaagtccagcaaaggtggtcttttcggtgacaatatcaaatggaacttctccaagttcttggtcgacaaagaggggcgtgttgtggagcgctatgcgccaactacttctccactcagcatggagaaggacatcaagaagctgcttggaagttcttaa</cdnaseq>

Protein Sequence

<aaseq>MPSRTAPFISRLRLLRTAAALSPFSSSAPPRHSPRILRAIPVGA PHPPRVSAAVSPLVRPVAAGFALFSMATAASSAASVHDFTVKDASGKDVDLSTFKGKV LLIVNVASQCGLTNSNYTELSQLYEKYKDQGFEILAFPCNQFGGQEPGTNEEIVQFAC TRFKAEYPIFDKVDVNGDNTAPIYKFLKSSKGGLFGDNIKWNFSKFLVDKEGRVVERY APTTSPLSMEKDIKKLLGSS</aaseq>

Gene Sequence

<dnaseqindica>1..258#569..645#1335..1396#1535..1653#2064..2231#2325..2357#atgccgtctcgcaccgccccgttcatctctcgcctccggctcctccgaaccgccgccgccctctccccgttctcgtcctccgcgccgccgcggcacagcccccgcatcctccgcgctatccctgtcggtgcgcctcacccgccgcgcgtctccgcagccgtctcgccgctggtccgtccggtcgccgccgggttcgcgctgttcagcatggccaccgccgcctcctccgccgcatccgtccacgacttcaccgtcaaggtctgcactgcctcctgccctcctcaaaacttggacacccctttcccctctggtgatttggtcccctttcagcagcgagagactgaagctttatacccataccccatacccctctgggggaaagtatttgcacatcgatgcctccgtgatgctgctacgattcggcccttttgggacttcttaagccaatatctttttggttttagctgcagatttttttacccaaatctttggaggttttctacaagctgttatactgcttgaattgtgatcctaatgtttaaaggactatgctttttggtgtttgcaggatgcaagtggcaaagatgtggacctgagcaccttcaaggggaaagtcctccttatcgtcaatgttgcatctcagtggtaccaattattaccaatccctcacctccacagtgtctacgttttaattttgtaaacttggaaattattctagaatgcataatgtgatttatctttttcatgttgaaatgttccatgaacaacgaaaccttggaaccctagtactgcgttatcaagcgcttaagttgaatgatatgctcatttgatgcctaatataatgtatattttcgatcaaacttccattcatgttgcaaagtaaagatgccgaatttatatggtttcatatggaacacattcgagtttctatctaggccatatgagacaaatcgaaatttgaagtattgttctgctaaatgaaactttaaaaagagccatggtagtgtttgtcccggaggatcagcctttgcatgtagattatcgatatatggaaaaaataataatctggtcagcaggtaagttggttttagctggacaacaggatgttgatctcttgccaattggaaagtttgtgcagattgtcataccattaactatttttctatttgcgtctcatcctccttgtgttaagggatacatgttctttagaggacggccattttttttttactaattttaaagaccaatgagatgcagatataataaaataacatacaaactgatatcattatcctcaaattaagaaatcttgttgctctctgtcattgttgcagtggcttgaccaattccaactacacggagctgagccagttgtatgagaagtacaaggaccagggtgagtgttagatgcatctcatcatttgttccctcattatgaaatctctcttgtgcgctgaattgctcatatgttctttcatttggagtttatgaccaaccaattgctaatgtcattgtcaatttgatttgacgacaggttttgagatccttgctttcccatgcaaccagtttggtggacaggaacctggcactaatgaggagattgtccaatttgcttgcacccgcttcaaggccgagtatccaatttttgataaggtaaatttgggcacattataccactacctcttgcatttttgcactttttttttcatttatctttcaagcggaaagaaacaactaactcaagtatatgttcaccttccagagccgtcataatattttaaaggaaattaatcccattccgaaagtgttccctttcatatgtagcctgtgatgtatttccagatacttgtctagtacttaaaaggaaattgatcaagtccatgaagtttttatccgattcttatgcatttcgtatgatgtatgcgatcgataagcctgataccagttttatcctttcatttatcacaagaaagaatcatggatgtttataatgtgatgatcaattgatttttattgtttagagaggtgagatctagaagttctaactaccattatcttaataggttgatgttaatggtgacaacactgcacccatctacaagtttctgaagtccagcaaaggtggtcttttcggtgacaatatcaaatggaacttctccaagttcttggtcgacaaagaggggcgtgttgtggagcgctatgcgccaactacttctccactcagcatggaggtaaatcccgagctccaagtgggtgtaatttgagttccatctcatcaagcttccttgccttcacttacagcgattgctttaatcatattacagaaggacatcaagaagctgcttggaagttcttaaaaccttaccgccggcgccaccagatgcactgctgcgttgcattgagcacttggaacttccaataatgttgtaataaaactgtgcttggaattgctgtattttcatttgcgtagccctgctgtgtaatgtataaagtattaacgtgtaatgaaattggcttactgcatcactttgcccctttattgaaatattatctcctgtatctgtgttcgttattgagacctgcgactgcgatgagcaagttttgacgtgtaacgtgtactcgttctatctgtgc</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0664000, RefSeq:Os02g0664000