Os06g0724100

From RiceWiki
Revision as of 09:35, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os06g0724100| Description = The start codon is not identified.| Version = NM_001065144.1 GI:115470019 GeneID:4342097| Length = 5633 bp| Definit...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os06g0724100

Description

The start codon is not identified.

Version

NM_001065144.1 GI:115470019 GeneID:4342097

Length

5633 bp

Definition

Oryza sativa Japonica Group Os06g0724100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:31639492..31645124

Sequence Coding Region

31639494..31640249,31641506..31641592,31641692..31641823,31641919..31642065,31643278..31643343
,31643422..31643532,31644136..31644225,31644454..31644487,31644570..31644646
,31644732..31644809

Expression

GEO Profiles:Os06g0724100

Genome Context

<gbrowseImage1> name=NC_008399:31639492..31645124 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:31639492..31645124 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>aaaggcgcccaccactcgctcctctcttttcctctccttcccctcctctcgccggagactacctcgccgtcgccggagtccccccgccgatccgatcccgacaagccggagatgcatccctccggtgagtactccccttactaccagccctacccctcgcccacctccgcgccgctcgccacctacccctccgcctccgcgccgccctacacgccgtaccccgccaccgactacgccgcccccgccgcgtaccccacctacccgccgccgcccgccgatcccccccagtacgcgcctcccccggccgcgccgcagccgcagccgtactacccctacgagccgcccccgcacaacccggctccctcgccttacccgtcgctagatcgggcaggaagctacggctacggatccggatcccaggagctgtacccgcccaagcctgccgggggcgggtggtcggatgacggggtgtacgcgtacagcggcggcggcggcgacgcgccggagccgtacggcgcgaggggcaccgcgccgaggtcgaattccccgctgtttgatgactacgggaggtcgattggttcgaccaaggagagaggtggcggtggtggtggcggtggaggcagttcggcgagccccaaggtggtgcgggcagtgcccaaggtggagacgtcggaggacacgagtggtggtgtgcagaagttccgggtgaagctgctgccggagggcgcgggcagccccatggatgtgctctgccaggttggtttggatgggattcggatgcttgatcccaatactagtaggacattgagaatatacccccttgaaactgtaactagatgggatgtattagattcttctatctttgccttttggtctaagagctcagttgattttgaagcaagaagaataaggctgaagtcaaacagctatacaaccaacaccattcttgacactgtgacagccgcgagtgtgcagttcaaggaaatgggcggaagtagcatttcgagaagtagagcaattgctgatgctgccaaacctcctgaacaacaaaatgataggaggaaaaatttccttgattggaggaacttaatgaagcccatgaacgaggagaaagaccactgggtcccagatgaagccgtcactaaatgcacagcatgtacagcagatttcagtgctttcaatcgcaggcatcactgtcgaaattgtggtgatattttctgcgacaagtgcacccagggaagaactcctttaactactgatgctgatgctcaaccagtgcgagtttgtgacagatgcatggctgaagtttctcaaagactgaacaatgcaagggaagcggcaaatcggcctattgttcacagccatgaggatcttgccaaaaaacttaaggatgcaatggatataaataagaagtcatcttcagcctcgtcaaggtctacggatggttctagcaggcgaatgagggaggttgcatgccccacctgcacagtccaccttcaggtgcaagtcccaacatctggttcagagaccatagaatgtggtgtctgccagcaacctttcctcgtcagtgctcgatga</cdnaseq>

Protein Sequence

<aaseq>KGAHHSLLSFPLLPLLSPETTSPSPESPRRSDPDKPEMHPSGEY SPYYQPYPSPTSAPLATYPSASAPPYTPYPATDYAAPAAYPTYPPPPADPPQYAPPPA APQPQPYYPYEPPPHNPAPSPYPSLDRAGSYGYGSGSQELYPPKPAGGGWSDDGVYAY SGGGGDAPEPYGARGTAPRSNSPLFDDYGRSIGSTKERGGGGGGGGGSSASPKVVRAV PKVETSEDTSGGVQKFRVKLLPEGAGSPMDVLCQVGLDGIRMLDPNTSRTLRIYPLET VTRWDVLDSSIFAFWSKSSVDFEARRIRLKSNSYTTNTILDTVTAASVQFKEMGGSSI SRSRAIADAAKPPEQQNDRRKNFLDWRNLMKPMNEEKDHWVPDEAVTKCTACTADFSA FNRRHHCRNCGDIFCDKCTQGRTPLTTDADAQPVRVCDRCMAEVSQRLNNAREAANRP IVHSHEDLAKKLKDAMDINKKSSSASSRSTDGSSRRMREVACPTCTVHLQVQVPTSGS ETIECGVCQQPFLVSAR</aaseq>

Gene Sequence

<dnaseqindica>3..758#2015..2101#2201..2332#2428..2574#3787..3852#3931..4041#4645..4734#4963..4996#5079..5155#5241..5318#aaaaaggcgcccaccactcgctcctctcttttcctctccttcccctcctctcgccggagactacctcgccgtcgccggagtccccccgccgatccgatcccgacaagccggagatgcatccctccggtgagtactccccttactaccagccctacccctcgcccacctccgcgccgctcgccacctacccctccgcctccgcgccgccctacacgccgtaccccgccaccgactacgccgcccccgccgcgtaccccacctacccgccgccgcccgccgatcccccccagtacgcgcctcccccggccgcgccgcagccgcagccgtactacccctacgagccgcccccgcacaacccggctccctcgccttacccgtcgctagatcgggcaggaagctacggctacggatccggatcccaggagctgtacccgcccaagcctgccgggggcgggtggtcggatgacggggtgtacgcgtacagcggcggcggcggcgacgcgccggagccgtacggcgcgaggggcaccgcgccgaggtcgaattccccgctgtttgatgactacgggaggtcgattggttcgaccaaggagagaggtggcggtggtggtggcggtggaggcagttcggcgagccccaaggtggtgcgggcagtgcccaaggtggagacgtcggaggacacgagtggtggtgtgcagaagttccgggtgaagctgctgccggagggcgcgggcagccccatggatgtgctctgccaggtactctctattctgctccttggttgaggacggtgataacttttgtggacattgtacatgctattctaaaatcaatcaatggttagttattaactgtaaatttgatccttgtgcgtcgtaaacggatgctttcaaataggaatgtgtgctgttcttctggttgttaatagcttcattggctgcatatttgcagcatgggaaagtaatgactagaggttgaatatgtattacaaatttggcataatggactatgctctggacctccctttgcataatcgcttgcggagactcaaggattaatttgtggaggtttgatgagttagttttcctatggaaaaattggacacattgaagaatgctagccaattgtggaggatgctaagtatagttgtttgtttcctagctaattaactactccctctatttcacaatgtaagtcactatagcatttcccacattcatatgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacggaggaagtacatattttttagggatagctattacctacatgacatgtaaggaattatatcattgtcatttgatggttaagaaaagttatcaaataatgaagttagaacttaggtagggagatccattactttatcaagtagtcaaagactaagagttatggatgaaggaggccctttcaattgcaggaacaagattgactttctagagccacatgcccacatagtattgagcttgataaagatgtgaaagtaaaagaagaataaaaataaaactgcatgcgcttgataaaacaatgtgacaagcctatcaaatagttagcagaatcaacttcccccaccatccttcctattagcagtactttacgggttgatgaaaaaggttgagaatgagttcaatggagtggttgtcttgctttagtttccttgtagacaaagttccctgtaccgtcctttttgctaacttcatgagacagatgtaatataaaacgatcgcaatgtggaactaactgtctaagtagacatatagttctggacactgcatctacaatgccatcatgataataaaaaatgctgaagaaattattaactcataatatgggaccaaatatgtaagtttttgcattggatgggtgaagttttacgctgttgtacttattgtgtacttgcgtctactcctggaatgacccaataatcattattttattacttatctggttgtaccttgagcaggttggtttggatgggattcggatgcttgatcccaatactagtaggacattgagaatatacccccttgaaactgtaactagatgggatgtaagttttgggctactgttgcatcttgatcagaaagttatagtttttgctatatatttggtgatttcttttactaatttttatgggatacttatgcaggtattagattcttctatctttgccttttggtctaagagctcagttgattttgaagcaagaagaataaggctgaagtcaaacagctatacaaccaacaccattcttgacactgtgacagccgcgagtgtgcaggtttgcatccgtattcatgatattcattttcttcatcgttcagtttttggcaaattcttaagcgtactatgcctggtttttctttggactaacagttcaaggaaatgggcggaagtagcatttcgagaagtagagcaattgctgatgctgccaaacctcctgaacaacaaaatgataggaggaaaaatttccttgattggaggaacttaatgaagcccatgaacgaggagaaagaccactgggtaagttctttctgtataggtctcaaggttttcctatatttcggtattcaaaatgacacacttgtaagttgtaactcatttattgcctgcttatctgtaatgttacattttacataccacgatatagtcttcggtgattcaaatctgcctagtcgtctggaatatcagttgcttaggcagatgaatgcaaaaataagcatgtatacatcttttcttccttttctttatgtttatggtcttaaagctttcactcagttaccattttatgtgtatatgctgaactgctgagaaatacgattaaaaaaaaatctcaaccagcgggggaaggaccgcccccactgcttttcattaagaagaagagcctcagccaacccagccaagaaaggccacgaaccctggcccagtggcccccccacacgcggactcgcccccctatggatcggtccttaacccatgctttgaggcccttgccccctaacgaggctccgccctccataggtcgcttcttaacatgtgtttttacgaggggccagcgagtgaacttttctaaccaggcctgaaatttgctcccgtggggagtcgaacccaggacatagaggttcaacttgagccttgtaaccgctaggctacaagcccttttgctaaatatgattatgtagtttctgatttctgttatactgtaacataatttggcttcactttcttggattgtggtatttcaataaaatcgagaggcaaaagctgatttcatgtgatttgaactttgttatggctattatgaagaaagtcagtttaaattaatttatttgccttattctcatactgcgtgttgttgttgttaacaaatttgtcatttgtgaattattagcaccgcacagtaactctattttttggattcacaattttgttttgtggttattgatcgcatctcgcttattttcctaatgagttatctgtggcttgttctttgcaccgctaactctacttccctttggggtctgtctgtattataatgggccctacctgctattcatgggtctgtccaagcatttatctttccgtccccattaatgcaatcgaatcttcatgtggtctcttggtatatggtttgcatttttggatgtactttcccttttgtcttgttctatttgtagacttatttgtttcagttcttttaactagttatgttattttctgcacttctcctattaggtcccagatgaagccgtcactaaatgcacagcatgtacagcagatttcagtgctttcaatcgcagggtaataatggttcacttttgacctgttgatgataacttgggggttccatcttttaatgttgtgagtctgtattttcagcatcactgtcgaaattgtggtgatattttctgcgacaagtgcacccagggaagaactcctttaactactgatgctgatgctcaaccagtgcgagtttgtgacagatgcatggtagtgtctctcatccttctccatcgagtcctagttattgtttatgttatacagatctctttggtgtttccctgtgcttagagggtacatgcatcggaaaaatgaatttgtcacatgattatataatcctaactgtgagttgtaacataagatattaaaatgtgaggcctcattgctcatgtgaattactgatgctaggcttggacaatatcaggattttgtagtggagttataccttaattttctgaatgatgctatgcttcttctttctgcattactgggagataaacagggagttacctatgcacttttctgctcttgaaggaggatgtggcattaagttttgtttcaaccatcagatctacactgttttaatgactacccatctatcattttaaggacaaaattactgctgacttttaatatgagttatggtgttgagatagtcactttctgtttctgtcaagtggtctatgttgtgggcttgcacccattctaaatgtcactgttacagactaggaatatgctgttgattttattgacaaaactagatgtgtggttatcaatggatgataccaaaatcacgcttttctatttccataggctgaagtttctcaaagactgaacaatgcaagggaagcggcaaatcggcctattgttcacagccatgaggatcttgccaaaaaacttaaggtgcacacttctttcagctttgtgaattgtgatgcaagagccttctagttggccattgtattacttacctatacactgttcaaatgtatggaaatgctccgttaactggaggcatctgcaaccttctgtagtatcattccattttggatgaatttgcctgtgtgccactagaattaactgtaagacaaatatgcatgcttactgaagatgatctgtggtttgatacaggatgcaatggatataaataagaagtcatcttcaggtttgcctatttatgtgtactctgtttcagaaatgtcctcttttcaccttagcatctaaaaccatgttggtttcatcgacagcctcgtcaaggtctacggatggttctagcaggcgaatgagggaggttgcatgccccacctgcacagtccaccttcaggtatagtaaccgtgatattccttcttggacggtttattggtttcactgcatggacccatttgatccaaatgaaccattcctacaggtgcaagtcccaacatctggttcagagaccatagaatgtggtgtctgccagcaacctttcctcgtcagtgctcgatgaattccatcatcacgcaggctctacattgatccacaaagaaaaagattctgttgctgtcaaggttgctgcttcggtcattcattgtcttgatggggtccgttgctcctctgtatatgatgatgatctaatttagtacaatcatattcagaagtaaggaagaggcgaataaagaagagtgttagtgtttgtttaccatgtttgacgtttagcctgttcttgtctgaacttttccttgtgtacattgcggatatattgcttcgagttccatgtgacatggtgtaatttactgctggtatactgcattttgatccatcg</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0724100, RefSeq:Os06g0724100