Os06g0724600

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Revision as of 09:35, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os06g0724600| Description = Similar to Transformer-SR ribonucleoprotein (Fragment)| Version = NM_001065149.1 GI:115470029 GeneID:4342102| Length...")
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Gene Name

Os06g0724600

Description

Similar to Transformer-SR ribonucleoprotein (Fragment)

Version

NM_001065149.1 GI:115470029 GeneID:4342102

Length

4800 bp

Definition

Oryza sativa Japonica Group Os06g0724600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:31656798..31661597

Sequence Coding Region

31656926..31656928,31657020..31657042,31658833..31658973,31659231..31659333,31659413..31659562
,31659660..31659734

Expression

GEO Profiles:Os06g0724600

Genome Context

<gbrowseImage1> name=NC_008399:31656798..31661597 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:31656798..31661597 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcggagacccccgagcgcaggaggtactcagggtccccctctccttacaggggaaacccaaaatcaaggtcaagatcacgatcacctgctgctcgatcccagtctaggtctccagtccctgaccctagatctcaggcaaggtcaagatcaagaagccgcgagagggagcctgatgctgtaaatcatggaaatacactgtatgtgactggactctcttctcgagtgactgaaagagaacttaaagattacttctctaaagaaggaagggtgactagttgccatgttgtccttgaaccccatacacgtgtttctcgtggatttgcttttgtcaccatggacactgttgaagatgctgaacgctgtatcaagtatcttaaccagtctgtaatggaaggccggaacatcacagttgaaaagaagagattgtgcaagctatgtgcaacaatcaagatgctgagttcatcaatttcaactttagctcatacagcttga</cdnaseq>

Protein Sequence

<aaseq>MAETPERRRYSGSPSPYRGNPKSRSRSRSPAARSQSRSPVPDPR SQARSRSRSREREPDAVNHGNTLYVTGLSSRVTERELKDYFSKEGRVTSCHVVLEPHT RVSRGFAFVTMDTVEDAERCIKYLNQSVMEGRNITVEKKRLCKLCATIKMLSSSISTL AHTA</aaseq>

Gene Sequence

<dnaseqindica>129..131#223..245#2036..2176#2434..2536#2616..2765#2863..2937#ggttggaagcggagaccgagagagagaagcagcacccaaaccctagccctcccctctcctcccgcacgcgcgcgtcggcgccaccaccgggagctccgccgccgccgccgcctcatccgccccgtgccatggtgagacctgcttcctcttctctcctcggcgcagtctgtatttctccgctgatttggctgatctcggtgctgacgcctctcctctttgcaggcggagacccccgagcgcaggaggtaacgacctcctcgatctcccgatttggtgcctggtttgctatttcgttggttggccaccttctggctcctccgatgcgagcttttccgcctagaatcgtagctgcgtgattcgagctggatgcccattaggtttaggggcaaggcaacacacgaagattcgtagcatatgcctgtggatttcctttttgtttgagcatactatgtcagcaggctgattacatgtgttcatatggtgctcaatatgttagcatcatgttctaagttgcagttctctagtgacataattagttcggtagtgtttcaacctactgttccttacgattaattatgttttggcatgtcgccaatgaactttgaatttctgcgacgtagatgcccttgttcatttgtacaaggatttctttcctggtgcttatagaaagcatgatagggtttgcctttaagcatcaggacattgtgctatggaagtatgatttgatatgagtgcatggcttactttctatcatcccatctcagtggaaatattcatgtttgcatcttgtaattagatttaaactactatgttttgccaataatttttcctagtggttggcgacaaacttgacagtataggggttattcaaatggctgtttgagttacatgctttcttctgaaatcgttttccacttttgtcattcgtatcatagaagctaatgtctagattagttaaattgcactactacattcgtctgggtattccaatttttatttccttttccccaccagtttctcaaaagttcttttagaacatgaggtgaacttacataacatttccttgagaagatggttaatgccattggacatgtcagtaaatactggctttatattagttatgttgcttgtactgttactcataacttcgggcaactaaataagctataggttgatgccaggtgtttgccgctgtagaaaggcaatgctcttcagtttatattactgtagtaaaaaatgatagtagtatgatcctgaagccatatgaggactttgtttagtgttgcattcagccgtaacacattctaagtgtggctcgtatgcttgttggtccatgaacaaaagctcaatcgtagacattttgtctacagttacttatcagcatttggtatcataatcatgatgccacttcaataaggatcatgtcatgttcgattcataatgtatgctgctgggagtgctcatgtttctattagactgttttgtactccctccatcccaaaatataagcatttttgaacttcgacacggtcttcgatatgctactttgaccaacaatatctatggacataaaatgttttaaataaaaagagttacatattatgatagtttgattaatgataattctagtaacatcaattttacttgattgatcttttttattttttgctattaatagtcaaagttaaaaacaattgacttggaactatgctaaaatgcttatattttgggacggagggagtactcttcattcgggaaagtttgttatgctttctcccaatgttttatttggcttcagaatggtgtccatcgttttgtcttttctctacatctattccctaccagtaaacatgggatttcctttgctaatatttttcatagtttgcattgaggatgatagtagggaactggtttccatgaatttaaatatttgtcttcctatttttgttgttttcttgcaccaatcaagatcatccttgttagaacttttatgaatgtttaatatttcatgcatgcgacaacttcttactttcaggtactcagggtccccctctccttacaggggaaacccaaaatcaaggtcaagatcacgatcacctgctgctcgatcccagtctaggtctccagtccctgaccctagatctcaggcaaggtcaagatcaagaagccgcgagaggtatttgcttatattgcatatgctgccatctatttcacatagtatttgctaatattgcatatgctgccatctatttcacatataatgtttctcttcacaaatggatgaaagaaagaggggtagagggactgatggatgttttgtgttctgtaaacaaaattattgtagtacagtaacagctgacttgtgtattgtgtgttctgtatttacatggaaatcaatcaacatccatgttattaacttgtttttggttgcagggagcctgatgctgtaaatcatggaaatacactgtatgtgactggactctcttctcgagtgactgaaagagaacttaaagattacttctctaaagaaggaagggttagttgacttcataaagttaccgcaatatgttcctattctgcagaatcactgtcttatgtaatttcctgtttgttaggtgactagttgccatgttgtccttgaaccccatacacgtgtttctcgtggatttgcttttgtcaccatggacactgttgaagatgctgaacgctgtatcaagtatcttaaccagtctgtaatggaaggccggaacatcacagttgaaaaggtaatttgtttgttcatatctgcttgggttgtttgatcagtatgcaaccttgtatttcctgaatgttgacctggaggtttttttggttatcattcagaagagattgtgcaagctatgtgcaacaatcaagatgctgagttcatcaatttcaactttagctcatacagcttgatcaatggacagcccaaagggttactatgcaccacaagattcacaactaaacatagcaaattttcaactaaacccctgagcattcatcttcaacttccaacatcaactaatcaacgggcattcacaactcgttagacaagcatgtgtggtgacgtacgcatagcaaatattggatccctgctagttggagtttgcgctcttcattacatatttcctccattggtccgtaattgcggcatatgttgattgatcgtaagaggaacttgtaattacctacacaatccagactgacacttctcatatcctagtttggaccctcgactttgtgctaatggatttctgttttatttcagtcacgtcgaggtcgcccaaggacgccaactcctggaagctatcttggtatgtaaattgtaaaggagctgaaacttgctgcataactctgtaaatatgcaatactagtgttttgcactgtcctgtttaaatttccctttttcttttgtgctggtccctcttgtgctttatgtttttcaacttgaggtgttacctttacaggtcatcgatatgaccgtagagagccacgtgggagataccgcagcagaggaggtggctatggccgtgatgagtactacggcaatagctaccgcaggtctccgcctccaatgtacccatcctacagggacacaagggactaccctccatacagggacacaagggactactccccccacagggatgctcgagattactacgacggaaggggaggcaggggatactccccacatagatctcctccttatggcggtggcagggcccggagggagcgatctagatcattgccgtattctccctaccggatgcctgagagaggctatggacgccaagccggtggtggtggctatgacaggtaaggttgctcccttggctcttgttgcattagatacctgaattccaagctggaaaacgtgctgttcctgttagccctgatgaatgttagattgctgtagctttgtactatttgaaagatgcattcctggatttaatgaacgttgttgtatggggtacctatagacgggggtgtttagatggggctaaaactttttaacccatgtcacatcggatgtttggacgctaatttagagtattaaacatggactaataaaaaaactaatttcataaatgagagctaatccgcgagacgaattttttaagcctaattaatccataattatcaaaagtttactgtagcatcacattgtcaaaatcatggcgtaattagactcaaaagattcgtctcgcgaattagtccaagcttatgaaatgggttatgtaattagtgtatgtttaatactccaaattagtgtccaaacatccgatgtgacagggacttagaataagtctctggaaaccaaacagcccctagtctgtaatctggaatgattttaagtacgactggtatgtcttattttggcacctttattggagtgtttgaaatcgtggggggcagagtggcagtagctgctacgtggctattatttgacatgggccataatgcgcatccttgaaaggtgaaagctggaatattcacctggaggacagcgcggtaagtttgatgtaagtaaaagtgcggtggtgaaaaaacgtgggtgtgtacatatgagaagacaaaaggctttgatgtgccggtcctgcagcccctgcatcatcattgtgtctgatgccatggaatggaatccagccagagaagtgagattgcaactttgcaagatcgatgcatgtgacggcgtttgtggttttttgttgttggattggatgatggaaccgaatggatcatgtgagttaatctactagtacagtattaaaagcc</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0724600, RefSeq:Os06g0724600