Os02g0720200

From RiceWiki
Revision as of 19:22, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os02g0720200

Description

Similar to 65kD microtubule associated protein

Version

NM_001054485.1 GI:115448340 GeneID:4330548

Length

4204 bp

Definition

Oryza sativa Japonica Group Os02g0720200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:30764110..30768313

Sequence Coding Region

30765016..30765069,30765186..30765389,30765819..30766076,30766189..30766404,30766498..30766653
,30766764..30767075,30767163..30767250,30767423..30767571,30767758..30768090

Expression

GEO Profiles:Os02g0720200

Genome Context

<gbrowseImage1> name=NC_008395:30764110..30768313 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:30764110..30768313 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtctgctttgctccgtgaaacttcgtgtggatcattgctgcaaaaactgcagtcggtatgggatgaagttggtgaaagcgaggaggaccgcgacaaggttctatttcagctggaccaggagtgtttggatgtctacaagcggaaagttgatcaggcaaccaaatcaagggatcttcttctccaggcactggattactcaaagacagagcttgctaggcttgcttctgcccttggtgaaaaatccatagatataagtcctgagaaaacagcacggactatcaaggaacaactaactgctatagctccaacacttgaacaattgggcaagaagaaaaaggagagaataaaggaattagctaatatacagtcaagaattgagcaaatacgtggtgagattgctggtactctggagatgggacagcaagtggcactaccacagattaatgaggatgatttgacagttcggaagcttcgagagttccagttacagcttcaagagcttgagaaagagaagagtcgtaggctggaaaaggttcttgagcatgttggtatggtacatgatctatgcaatgtgcttgggatggatttttttagaacaataactcaagtccatagcagtctagatgactctattggtaacgaacacaagaacataagcaatgaaaccctgtcaaaacttgataggaccattggtactcttaatgaggacaaaaggttgagacttgagaagcttcaagagcttgccactcaactctatgatctatgggatcttatggacaccccggtggaagaaaggagcttgtttgatcatgtttcgtgcaatagaacagcaactgttgaggaggtcatggttcctggtgcacttgctgttgatgtgattgatcaagcacagactgaggttgaaaggttggatcagctaaaatacagcaagatgaaagaaatagcttttaagaagcaagccatactggaagatatttatgctagcactcatgttgtattagacacagcagttgcccatgagaaaatacaggcactgattgagtcagggaacatggaaccttcagaactgattgctgacatggatagtcagatactgaaagcaaaggaggaagctctgagcagaaaagaaatattagataaagttgagagatggatatcctcatgcgaggaggaaagctggcttgaagactatagcagagatgacaacaggtataactcaggccgaggtgctcacctgaatctcaaacgtgcagaaaaggcccgtattctagtcagcaagattccagcccttgttgaaactctggtggctaagacgagagcttgggaagaaaatcacgggctgccatttatgtatgacggtgtttctctgctagcaatgctggatgagtatgtcattcttaggcaagagagggaagaagagaagaaaagaatgcgggaacaaaaacgccagacggaacagctactaaacatcgaccgtgaggggccattcggaacacgggtcaatccctacagagtgaccagtgcaaagaaggtggctggcacaaagccaaacggtggcgcatcaaacgggacaccgagtagaaggctatcaaccggcaatcagctgaacgagagcaagagtactggccggtctgctggtaaggatgacaagaaaggcgcgtcgaagaacacggcaacttcactgaacgaagcagctcctgcagacaaggaagctgcagactcatccaccgaaaacttcgacgctgatccggttcctggctcgacatga</cdnaseq>

Protein Sequence

<aaseq>MSALLRETSCGSLLQKLQSVWDEVGESEEDRDKVLFQLDQECLD VYKRKVDQATKSRDLLLQALDYSKTELARLASALGEKSIDISPEKTARTIKEQLTAIA PTLEQLGKKKKERIKELANIQSRIEQIRGEIAGTLEMGQQVALPQINEDDLTVRKLRE FQLQLQELEKEKSRRLEKVLEHVGMVHDLCNVLGMDFFRTITQVHSSLDDSIGNEHKN ISNETLSKLDRTIGTLNEDKRLRLEKLQELATQLYDLWDLMDTPVEERSLFDHVSCNR TATVEEVMVPGALAVDVIDQAQTEVERLDQLKYSKMKEIAFKKQAILEDIYASTHVVL DTAVAHEKIQALIESGNMEPSELIADMDSQILKAKEEALSRKEILDKVERWISSCEEE SWLEDYSRDDNRYNSGRGAHLNLKRAEKARILVSKIPALVETLVAKTRAWEENHGLPF MYDGVSLLAMLDEYVILRQEREEEKKRMREQKRQTEQLLNIDREGPFGTRVNPYRVTS AKKVAGTKPNGGASNGTPSRRLSTGNQLNESKSTGRSAGKDDKKGASKNTATSLNEAA PADKEAADSSTENFDADPVPGST</aaseq>

Gene Sequence

<dnaseqindica>907..960#1077..1280#1710..1967#2080..2295#2389..2544#2655..2966#3054..3141#3314..3462#3649..3981#agcagcagcagcagtgaatgctactctcgctctgctactcactcctggcgccggtgacctctctgccactccaccggacggcgacggcgaggcgggtgagctctctcgccgcctccggctctcctgccaccgggcctccacattcggcgtcgcactccttcgtcttcgcgtgatccggtaagccgtcgccgctcgtggcaacggagatctggttattttggtgcttgatgtgtgtggatgagctgagagtttcgtggattagtggagtctaagagatggccttggcttgggtggtgggattggcgcgtcgcggcggcggaatgcgcttgtctgtctctcgacccctgatttggttagtctcgatggttccggtggttttgttcttaggaatttccgaagaacttcatccagttgtcgaccaatggcgttgtttgtagttctagatttggtccagttgcgtgctcggtggagatgatctcgatgcagagctatctccatatgaattatcgattttggttgcgtttcacggatggatttgtttaggtttgagataaatgttgttggcctgttgaaactcccaggtattgagctgttttgttgttgttgttgtgtgcggcagtaattaatgttttttcccttgggccatcagctgtttctgcgattggcatttaatagtatttctgtcaattggtgggggagatgtgatgctagaacgatttaaaatgctagtagttatatgtgtctcttataatcatatctgaccaattcaaatgctcagcctggcagatcgggatcgactaagcattggcctttgcaagttttgaagtgcatttcaccgttgcttttgtcttgagcaagagtttatagagccatacagctccgacaaaaggattcacctattccagaatgtctgctttgctccgtgaaacttcgtgtggatcattgctgcaaaaactgcaggtatgcgtgtgaactgctccatacttgttcatgtcataactcattagagatttttttttttgcttgtgtatttgtgttcaagtagaggttcttcttttctatttttgaattatcagtcggtatgggatgaagttggtgaaagcgaggaggaccgcgacaaggttctatttcagctggaccaggagtgtttggatgtctacaagcggaaagttgatcaggcaaccaaatcaagggatcttcttctccaggcactggattactcaaagacagagcttgctaggcttgcttctgcccttggtgaaaaatccatagatataagtgtaagtaaatatgcgcgtcttcttccagtacgcataggctaatttcagtctgaattaatactggaaagaatgaggcaggcacgattcactaaaattttcagtattcaaatatgagttgttgaaatactgactactgatccactttcgtgttgttctgtgtcattgtgtttcttgcatcttgacttaccagttctgccatgctagagtatgtttggtgttgattgctggcactattagtacttgcatagaagttcagtaaaaatgcagttggttttttagtaacggtgtgcaagtcctcttgaaactgatgattatggttaataggatctggcattgtagttcagaagtcagatggcacttcacatgtttgctaaattattatgcttaaatattagtggatgcaaaagtgacaattttttatctgtacagcctgagaaaacagcacggactatcaaggaacaactaactgctatagctccaacacttgaacaattgggcaagaagaaaaaggagagaataaaggaattagctaatatacagtcaagaattgagcaaatacgtggtgagattgctggtactctggagatgggacagcaagtggcactaccacagattaatgaggatgatttgacagttcggaagcttcgagagttccagttacagcttcaagagcttgagaaagagaaggtacaaactttgtctgtttcatttggttttcataagtaatttatattgcttggtgatctctgtgtttttggtttcatagagactataatatatgtttccatgaatatcacagagtcgtaggctggaaaaggttcttgagcatgttggtatggtacatgatctatgcaatgtgcttgggatggatttttttagaacaataactcaagtccatagcagtctagatgactctattggtaacgaacacaagaacataagcaatgaaaccctgtcaaaacttgataggaccattggtactcttaatgaggacaaaaggttgagacttgagaaggtaactcatattttctttctttcagttttatacttagcaaccaagagccattcttatcctggatctcatgtatgatttatactgtttattcagcttcaagagcttgccactcaactctatgatctatgggatcttatggacaccccggtggaagaaaggagcttgtttgatcatgtttcgtgcaatagaacagcaactgttgaggaggtcatggttcctggtgcacttgctgttgatgtgattgatcaagtgagtcacacaatatactaattggtcttttattggaccaccttcagcatcccttcatatatattttttacttctcgtttgattttgatcttcattacccaatatttcaggcacagactgaggttgaaaggttggatcagctaaaatacagcaagatgaaagaaatagcttttaagaagcaagccatactggaagatatttatgctagcactcatgttgtattagacacagcagttgcccatgagaaaatacaggcactgattgagtcagggaacatggaaccttcagaactgattgctgacatggatagtcagatactgaaagcaaaggaggaagctctgagcagaaaagaaatattagataaagttgagagatggatatcctcatgcgaggaggaaagctggcttgaagactatagcagagtatggttgttctgactactagtgaaacgtgttatcccacctatattctgaagctatgaagtactgagcatgaaattccttttgcaggatgacaacaggtataactcaggccgaggtgctcacctgaatctcaaacgtgcagaaaaggcccgtattctagtcagcaagattccaggtgcctactgtgatgcataagtaaatagttttggcagtaaatgataattctaagctttacacaatccaactcaagaagctctgcatttgggcataatgcaggataggctatatcttttctcctgtaaatattgtttttcctgttcgttgctaatgacagcaattttttttagcccttgttgaaactctggtggctaagacgagagcttgggaagaaaatcacgggctgccatttatgtatgacggtgtttctctgctagcaatgctggatgagtatgtcattcttaggcaagagagggaagaagagaagaaaagaatgcgggttagtgacacttcctttcttatactatcagaagctccttagtatcgactggatattgcatccaaatgcccttgtcaacaaggattctatggtggtgctacttatccacgcttcgatcaatcaaatgatgagtcagatgttgcaattggcatcaaaatcatctgttctatttctttcacattccaggaacaaaaacgccagacggaacagctactaaacatcgaccgtgaggggccattcggaacacgggtcaatccctacagagtgaccagtgcaaagaaggtggctggcacaaagccaaacggtggcgcatcaaacgggacaccgagtagaaggctatcaaccggcaatcagctgaacgagagcaagagtactggccggtctgctggtaaggatgacaagaaaggcgcgtcgaagaacacggcaacttcactgaacgaagcagctcctgcagacaaggaagctgcagactcatccaccgaaaacttcgacgctgatccggttcctggctcgacatgatctcgatgtggtacagatgaatggtgatttctgtcttttttgacaccctttattgtgttcgttgtagtatcttgttgttaggttttagacctgtcgtttctttctgttgactggtggttagtgcctgagtggtgttcaaacatatgggcggtttatattagctgtttagctctaatcttgccgtcagaagtaaaattagcctctcgtaagttttattggtttt</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0720200, RefSeq:Os02g0720200