Os06g0727400

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Revision as of 09:36, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os06g0727400| Description = Similar to Protein kinase APK1A, chloroplast precursor (EC 2.7.1.-)| Version = NM_001065172.1 GI:115470075 GeneID:434...")
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Gene Name

Os06g0727400

Description

Similar to Protein kinase APK1A, chloroplast precursor (EC 2.7.1.-)

Version

NM_001065172.1 GI:115470075 GeneID:4342126

Length

3564 bp

Definition

Oryza sativa Japonica Group Os06g0727400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:31830103..31833666

Sequence Coding Region

31830399..31830805,31830917..31831040,31831147..31831289,31831695..31831830,31832372..31832721
,31833361..31833445

Expression

GEO Profiles:Os06g0727400

Genome Context

<gbrowseImage1> name=NC_008399:31830103..31833666 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:31830103..31833666 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgggcaactgcgccagcgccatagattccttcttcttcaccaaaagggccaataacgagaacgacgatgacgatgctgccccaggaatgtctgcatccaagaggactactagctccaccaccaccgggaagctgtcaacacttagtaacagtactttcattccatccaccattagcggtgtaagcactgacgatgcttatccagacggccagattcttgagtcccgaaatctcaggatcttcacctttgctgaactcaagaatgctaccaagaatttcaggactgatacagttcttggggagggtggatttgggaaggtttacaagggatgggttgatgagaggaccatgaatccatccaagagtagcaccggtgtggtggttgctgtcaagaagctcaaccctgagagtgtacagggaacggagcaatgggagtctgaagtgaatttccttgggaggatttcacaccccaaccttgtcaaactcttgggctattgcaaggataatgacgaactacttcttgtgtacgagttcatggcaaaggggagtttggagaatcatctgttccgcagaggagcagtttacgagccactgccttggagcctcagactgaagattctcattggtgcagctcgtggccttgccttccttcattcatcagagagacagatcatctacagggacttcaaggcttccaacatcttactagattcgaacttcaatgcaaagctctcagactttgggttggccaagcatggtccagacggtggattgtcccatgtgacaacacgagtgatgggtacttatggctatgcggctccagagtatgttgctaccggccacctgtatgtgaagagtgatgtgtatggcttcggcgtcgtgctgcttgagatgctctctggcctgagggcgctggacccaagccgccccagtgggaagctgaacttggtagactgggcaaaaccgttactggctgaccggaggaagctgagccagctgatggacagtcgtcttgaggggcagtatcattccaggggagccctccaagctgctcagctcactctcaagtgtctgtctggtgatcccaagagccgaccatccatgaaggaagtcgttgaggctctcgagaagatcaagttgattaagagcaagtcgagggagcccaggaacagctcctcactggtgcgtggacaggggaattctccgaggagcgatagcgcgaggacgagctccaagggcagatga</cdnaseq>

Protein Sequence

<aaseq>MGNCASAIDSFFFTKRANNENDDDDAAPGMSASKRTTSSTTTGK LSTLSNSTFIPSTISGVSTDDAYPDGQILESRNLRIFTFAELKNATKNFRTDTVLGEG GFGKVYKGWVDERTMNPSKSSTGVVVAVKKLNPESVQGTEQWESEVNFLGRISHPNLV KLLGYCKDNDELLLVYEFMAKGSLENHLFRRGAVYEPLPWSLRLKILIGAARGLAFLH SSERQIIYRDFKASNILLDSNFNAKLSDFGLAKHGPDGGLSHVTTRVMGTYGYAAPEY VATGHLYVKSDVYGFGVVLLEMLSGLRALDPSRPSGKLNLVDWAKPLLADRRKLSQLM DSRLEGQYHSRGALQAAQLTLKCLSGDPKSRPSMKEVVEALEKIKLIKSKSREPRNSS SLVRGQGNSPRSDSARTSSKGR</aaseq>

Gene Sequence

<dnaseqindica>2862..3268#2627..2750#2378..2520#1837..1972#946..1295#222..306#gtgaccatccccctccgagagagacgcacggttgggttggtttcctcttcttcgctcttgagagatttgagctgagagagagagagagagagagaggagggctctcgatcgtcttccttgttgcgcgcgcgcgttctctaatcgaagtcgataggataggaggatagtctcccccgcttgactcgatcttctccttcctctcaaccggggaaagcaaggccatgggcaactgcgccagcgccatagattccttcttcttcaccaaaagggccaataacgagaacgacgatgacgatgctgccccaggtccgtatcccatcccatcttgctcttttcttttctgtatttatatataaaagattcaatctttctgtttttattatgcctttcatatggactttcaccatctctcttgtttgttcctgcaaacaatcatcttttccaacagcactatacccacccggattacttcttctattgctaattaatttacttctatacactcactctgtaattcgctctattcattgatttatctattttaactgaaaaatccattcattcacctcctagattgattgctgccaactgcacaacctttttttttatttttttctctcacaaattcactccataaaacatactccactaaacggtagtaccgttccccctcaaattaattatttttcagttctataaacaaattcccctgtatccttttttttttttttgctatgctccatcggtgccgtcacattcgaccatcacaaacatcaacaccacatttctacacattcactgaattatacttccaaattttaaccattaacctcgcttaaggaatatatatcccagaaatctttgttctaacaataatgtatatgagactgctgatttgtatccgcttaactcaaacctcacatttaatatcttcataccatgtaggaatgtctgcatccaagaggactactagctccaccaccaccgggaagctgtcaacacttagtaacagtactttcattccatccaccattagcggtgtaagcactgacgatgcttatccagacggccagattcttgagtcccgaaatctcaggatcttcacctttgctgaactcaagaatgctaccaagaatttcaggactgatacagttcttggggagggtggatttgggaaggtttacaagggatgggttgatgagaggaccatgaatccatccaagagtagcaccggtgtggtggttgctgtcaagaagctcaaccctgagagtgtacagggaacggagcaatgggaggtgattatcatgtcccaccaattgcttatctaaacatatttcttttgttaatttcattataaattgcttaattgattctcaggaagattctattttttcttgaaatcagggggctaaggcagccagtgttcaatattctcaaaccattggtagatttagttttgaaaaatactgtcatatagtttggaattgctcaagctgcaatcaccattttcatgctcatgacagggtggagcttgctggccctttgcattacttgccactcttgtcatgatctgataatattgcactacttatgtgatgtcttctctgtgccttgttaactgttatgtcggttgattctattaataaccagcaataaaaatctctggtggctctagtttgtttttcttgcctacatcatttcatactctatttacttacttttagagcataatccagtaccgttctcccatgagttgctgatggtaaaagtggtactactttccatgcttttctgttacgtgcttctctcaaaaggaactatgtgtttccgatgcagtctgaagtgaatttccttgggaggatttcacaccccaaccttgtcaaactcttgggctattgcaaggataatgacgaactacttcttgtgtacgagttcatggcaaaggggagtttggagaatcatctgttccgcagtgagtcttttcttggattccctttttttaatgataatatctgaaacatttctttttatgtcaatttgtttacctctctttatgcctactctctatacaatgcatcactttgcagatgttggtgcaattgcaacatcgttttcatcatgtattatatattaagcaccatattccatagtgctatacaactaatgaaacggactttttgaggacatcagcatcaacgaaattgtctggacctagacagttccttgttgctgctaccttccattattctttccttgttatgttaatgtttcaatataatatgaaaattattactctaatttttttgctagggtgtcaagggaatttatgatcaaacatcctattttcctagttctgatgctaattcttcatcatcaggaggagcagtttacgagccactgccttggagcctcagactgaagattctcattggtgcagctcgtggccttgccttccttcattcatcagagagacagatcatctacagggacttcaaggcttccaacatcttactagattcggtatatactctttagataactaactaattataattgataagcagctccctgttgcgcaaaacacaatagtctctaatcggtttgcaatcatgttgattgtgttcagaacttcaatgcaaagctctcagactttgggttggccaagcatggtccagacggtggattgtcccatgtgacaacacgagtgatgggtacttatggctatgcggctccagagtatgttgctaccggtatgtttcatcagtcacatccttgtgcttggactatttaaacaagaaagaaagtatctgttcattgcactaaatagcaaatactggttgatttcatctttcatgagctaggccacctgtatgtgaagagtgatgtgtatggcttcggcgtcgtgctgcttgagatgctctctggcctgagggcgctggacccaagccgccccagtgggaagctgaacttggtagactgggcaaaaccgttactggctgaccggaggaagctgagccagctgatggacagtcgtcttgaggggcagtatcattccaggggagccctccaagctgctcagctcactctcaagtgtctgtctggtgatcccaagagccgaccatccatgaaggaagtcgttgaggctctcgagaagatcaagttgattaagagcaagtcgagggagcccaggaacagctcctcactggtgcgtggacaggggaattctccgaggagcgatagcgcgaggacgagctccaagggcagatgatcgtagagatacataagattgggctgattctgttggtggtggtgtaaagtttaactatagtagatctcaattcttgatgtcatgacgaagtttgcaccgatcatgatgatcaatgtaacagtacaaaaatatactaaatctttatagctgtcatatagtcatatgcataaattcaattatttttgtattgaagcatcacgggttgcatcaggttgcactgagaacagcaagaagtcattgtcagtttatatgctttcctttcatttggttatagttttatacaagtgatgaaattc</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0727400, RefSeq:Os06g0727400