Os02g0735100

From RiceWiki
Revision as of 19:22, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os02g0735100

Description

Peptidase M48, Ste24p family protein

Version

NM_001054579.1 GI:115448528 GeneID:4330648

Length

3645 bp

Definition

Oryza sativa Japonica Group Os02g0735100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:31556078..31559722

Sequence Coding Region

31556153..31557097,31557188..31557339,31559195..31559444

Expression

GEO Profiles:Os02g0735100

Genome Context

<gbrowseImage1> name=NC_008395:31556078..31559722 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:31556078..31559722 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgaattacttgaagaactcgcgctccgtcctctccaggctcctccgccacaagcccaccggctgcccgcggctgccaccgtcgccgccgttgccgcaggcgcctcccgctgggtactacttcacctccccgagtcgcccggaggccgtccgcttcggccgagtgctcctccgaagcccgccgccgccgccgcggcctgcgcaggcgccgccgtctcggtacttctacacctccccgcagcggcagaaggtagtccacttcaaccgccggcgcgggtcccggtggtaccacgacccgcggaagctcaccacggtggtcgtcgtctcgggcggcgccgcggcggccgtctacttcggcaacctcgagaccgtgccttacaccaatcgcacccacctcatcctcctctcgcccccgctcgagcgccagctcggggagtcccagttcaacaatctcaagaaggagctgggccccaagatcctccccccgctacaccccgacagcatccgcgttcgcctcatcgcctcggaggtcgtccgcgccgtccaccgcggcctcgctggaaggcaccacgacgccttcgccgcggatgacgcctcctacggcgacatctccaccgacgtcgtcatcaagaaccacgaggccggcgcggaagacgtgatgctcggccggtcccgtggcaacaagaacgcgagcgtggctgccgcggcccagcgagacgaggaggttctggatgacagatgggtcaccgagagccgcgaccgtgggaaggcacggggagcacagccggagacgaggcatcttgatgggctcaattgggaggtgatcgttgtcagagatgacctcatcaatgcaatgtgcttgcccggtggcaagattgtagtctttactggactgctcaaccatttcaagactgatgctgagattgctactgtgcttgggcacgaggttgggcatgctattgcaaggcacgctgctgagatgattacgaagaacttgtggttttggatcctgcagattgtgatcatgcagttcatttacatgccagacatgattaatgcaatgtcgacgctactcctgaagcttcccttctcacggaggatggagatagaggcagatcatattgggctgctggtacttggtgctgctggttacgatccacgcgtagctccctcagtctacgagaaactaggaaagatcgcaggagattcaacgttgagtaattacctctccactcatccttcgagtaagaaaagagcacagcttttgaggcaagccaaggtcatggatgaagcactgagattatacagagaagttagctctggccaaggcactgaaggtttcctgtag</cdnaseq>

Protein Sequence

<aaseq>MNYLKNSRSVLSRLLRHKPTGCPRLPPSPPLPQAPPAGYYFTSP SRPEAVRFGRVLLRSPPPPPRPAQAPPSRYFYTSPQRQKVVHFNRRRGSRWYHDPRKL TTVVVVSGGAAAAVYFGNLETVPYTNRTHLILLSPPLERQLGESQFNNLKKELGPKIL PPLHPDSIRVRLIASEVVRAVHRGLAGRHHDAFAADDASYGDISTDVVIKNHEAGAED VMLGRSRGNKNASVAAAAQRDEEVLDDRWVTESRDRGKARGAQPETRHLDGLNWEVIV VRDDLINAMCLPGGKIVVFTGLLNHFKTDAEIATVLGHEVGHAIARHAAEMITKNLWF WILQIVIMQFIYMPDMINAMSTLLLKLPFSRRMEIEADHIGLLVLGAAGYDPRVAPSV YEKLGKIAGDSTLSNYLSTHPSSKKRAQLLRQAKVMDEALRLYREVSSGQGTEGFL</aaseq>

Gene Sequence

<dnaseqindica>76..1020#1111..1262#3118..3367#tcacccattccccgcagcgatcaaacgccgcccccgaaaaatccccaaaatacggggcaaaaatagaacaagaacatgaattacttgaagaactcgcgctccgtcctctccaggctcctccgccacaagcccaccggctgcccgcggctgccaccgtcgccgccgttgccgcaggcgcctcccgctgggtactacttcacctccccgagtcgcccggaggccgtccgcttcggccgagtgctcctccgaagcccgccgccgccgccgcggcctgcgcaggcgccgccgtctcggtacttctacacctccccgcagcggcagaaggtagtccacttcaaccgccggcgcgggtcccggtggtaccacgacccgcggaagctcaccacggtggtcgtcgtctcgggcggcgccgcggcggccgtctacttcggcaacctcgagaccgtgccttacaccaatcgcacccacctcatcctcctctcgcccccgctcgagcgccagctcggggagtcccagttcaacaatctcaagaaggagctgggccccaagatcctccccccgctacaccccgacagcatccgcgttcgcctcatcgcctcggaggtcgtccgcgccgtccaccgcggcctcgctggaaggcaccacgacgccttcgccgcggatgacgcctcctacggcgacatctccaccgacgtcgtcatcaagaaccacgaggccggcgcggaagacgtgatgctcggccggtcccgtggcaacaagaacgcgagcgtggctgccgcggcccagcgagacgaggaggttctggatgacagatgggtcaccgagagccgcgaccgtgggaaggcacggggagcacagccggagacgaggcatcttgatgggctcaattgggaggtgatcgttgtcagagatgacctcatcaatgcaatgtgcttgcccggtggcaagattgtagtctttactggactgctcaaccatttcaagactgatgctgagattgctactgtgcttgggcacgaggtggacttgggatttccgggttcatgtgtgattttggttagttgcggtggattggagatttggaactgacagttgtgccttttgttgtaggttgggcatgctattgcaaggcacgctgctgagatgattacgaagaacttgtggttttggatcctgcagattgtgatcatgcagttcatttacatgccagacatgattaatgcaatgtcgacgctactcctgaagcttcccttctcacggaggtattcacttcttccttttgatgtctttcgtggtggtttacagtctgcatgtggtaagttgcatttcatgggaatgagataagaagcattgttataagcttacaagcatttgggttcaagctccgactccctaagtcacattaaactagaggtctggtcaatgagctctcatctaggtcaaagatagtacttatatcctctgctagacctcaaataggtttgaatcatcattatcaaaactgtaattgtgttgattcagctagatagactagtatcaactgctacttgattaggctcataatttgaagatgtatattcctgcaattcagggtttacgtgctaacagtaagttgtcttgaaactaacagaaatcttatatttaaactaaaagaactccttccgcatgaaagttgaagtagaaaaatgtttttattcagtccttgtcccaagcaagacttcacaaaagacatcaaattcttttgtttccacactactttttggaatggtaggttacaatgtcatgtgtagctgcttcttttgttttagaattagataagattcaaatagcacatagcgtggattgtatgacacctactccataataccataagttgctacatgtaactgtgcaactattataactcctatggaaagaaattattgtttacagtgtactacaccttgaattttcatttatcgattattgagaagatgagccaatctatagttgagacagtggttttaataataaaaggcatgtttacgctgttgaattagggtaatgtcagtcactatgtcaagtccattttactccagttcgaagcatcagtcagttataatgttcaatgaggtggattaatatatacaaaaaaggataattgagtggttttgcaggagtaaaatttgaaaccaatgattgcccttcacatttatgtaaaatttgtcgaaacagctgttgcctacctttggctgcatagaaccttttgctttgcgatgagctgttttggaattcataccttccctgtttatttcatctgttacatgtttaaaaattgaaagcattggatatgccagaatcatttgaaattatttttttgggaggtggggtgggggcttgttgaggggggcgcaacgctctgaaccatattaaaatgggacgagtgttgcttcagttgagcagtacattatcccatcacacatcagtttaccctctccccaaattctcaatagttgctttttgacatgagcccccatcgtttggtcaaatatggatatacgccatatggcgtattagcaaaatattaataatttgtaggttaagcttttatatatatgttcttagcgacttaaacgtcaatgctgcaaaataaacttcgatgaaaaaacttcaaaattgagttttaaaatttaaattttggcattgtctgatgctgaatagaggaaacggtgggggtcatggcctagccagccgaacaaagctgttcccagacgttaccaagaagccacggagcatggcaatctcacaatagcacgacatgtacaccattcgtctattagcaatggatatttcatatttgttcatcttctgttgttagattcatgccctttattgattgttttaaacagtttttggccataattgtgtatccggaacaattatggttgtttgatcttgtcattgtttttgtgcataattggaagtcagtggtgaatcatgactgtctttgatatgatgattgatgaaattcaacataatctctcaataaggatcttgcctgaatttacttgtgcgtcatgcagttgtcagcgttgttattgtttgtctggatctcattcgatgttgttacctatgcaggatggagatagaggcagatcatattgggctgctggtacttggtgctgctggttacgatccacgcgtagctccctcagtctacgagaaactaggaaagatcgcaggagattcaacgttgagtaattacctctccactcatccttcgagtaagaaaagagcacagcttttgaggcaagccaaggtcatggatgaagcactgagattatacagagaagttagctctggccaaggcactgaaggtttcctgtaggttctatggcttcagattcagatctcaaaactctcgagctggtttcttactagtgccctaacaaaagaacacgctcttaccagctgcacagcgtcatcctataattttttggttgtttctttctgcgtctgagtgcttggtatcgccagttctgaattctgagggtaaatgtgtaccctcgttaccgaagcaggaagtcagctgcgtcatctgtgactaggaaagagtaaatactagtactacatttttttttgtgtcaataattgttgatttacagc</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0735100, RefSeq:Os02g0735100