Os06g0728700

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Revision as of 09:36, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os06g0728700| Description = Homeodomain-like containing protein| Version = NM_001065180.1 GI:115470091 GeneID:4342135| Length = 3023 bp| Defini...")
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Gene Name

Os06g0728700

Description

Homeodomain-like containing protein

Version

NM_001065180.1 GI:115470091 GeneID:4342135

Length

3023 bp

Definition

Oryza sativa Japonica Group Os06g0728700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:31902963..31905985

Sequence Coding Region

31903276..31903929,31904022..31904387,31904563..31904624,31904729..31904840,31904977..31905114
,31905691..31905714

Expression

GEO Profiles:Os06g0728700

Genome Context

<gbrowseImage1> name=NC_008399:31902963..31905985 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:31902963..31905985 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcttccatgccgcagctggaggaaaaggattcatccgatttggcaatcaacaaaggcccgtcgctggatcttgtcaaatctcccttgatgatgaatgatgcatctgcaactgtaactgcaatgcagcccaacgaggggatggaggagttccctgtcaaggttcggaagccttacacgatcaccaagcagcgggagaagtggacggaagaagagcacgacaagttccttgaggcattgaagctgtatggtcgctcttggcgtcagatacaagagcacattggcacaaagactgctgtccaaattcggagccatgcccagaagtttttctcaaaggtggtgcgtgagcccggttccaataatgcgattgagatccctccacctaggccaaagagaaaaccacttcatccgtaccctcgaaagtgtgcgaattctggatcggacgcaaatccagcaacagcgcaattgaagcttgctcctggctcatcttcatctggctctgatcaagagaatggttctcctatatcggtgctatctgcgatgcagtcagatgcttttggatcgtcagtatccaatccatcaaccagatgtacctccccagcgtcatctgacgatggaaataacattcccacattcacgagtggggaagataataatgtgccttgtgaaccaacagtgatagatccgtcccagtcccacaaggaaatagaccaagatagaaaagacgtgaataatatgtctgaagaggattcttcagaagaagaggtgcaagaaacaagcttgaagctatttgggaggacagttgtcatcccagatccaaggaagagaagctcctcagatccgaagcatgaaagtgaggagcagatatcacagccttccaatgaagaaatgttgcaggcttcttcatcggttggggagattccagcggcatattgtgcaccaaatggttggtttatgtcatacaattctttcccattccaattcggtgaatcagcggcagatgctagaattccccctttacacgtgtggtggccttactacggttttgctcccattagccatcctagaggactaagcacagtgatgcagcagactgaaggtagtgacgagagtgacggtgtgaagagccactcatccgaatcaagttcggactccggggaaaatgtgcagatgaccgctccccagagctcgagaatagtggaatcacttggagcgatttacgtccgagactcaggttcaagttttgagctaaaaccgagcgcaaattcagcgtttgtaagagtgaagccaagcaacagcggagatgaagaggtaataaggggatttgtgccttataaaagatgcaaatttcaataa</cdnaseq>

Protein Sequence

<aaseq>MASMPQLEEKDSSDLAINKGPSLDLVKSPLMMNDASATVTAMQP NEGMEEFPVKVRKPYTITKQREKWTEEEHDKFLEALKLYGRSWRQIQEHIGTKTAVQI RSHAQKFFSKVVREPGSNNAIEIPPPRPKRKPLHPYPRKCANSGSDANPATAQLKLAP GSSSSGSDQENGSPISVLSAMQSDAFGSSVSNPSTRCTSPASSDDGNNIPTFTSGEDN NVPCEPTVIDPSQSHKEIDQDRKDVNNMSEEDSSEEEVQETSLKLFGRTVVIPDPRKR SSSDPKHESEEQISQPSNEEMLQASSSVGEIPAAYCAPNGWFMSYNSFPFQFGESAAD ARIPPLHVWWPYYGFAPISHPRGLSTVMQQTEGSDESDGVKSHSSESSSDSGENVQMT APQSSRIVESLGAIYVRDSGSSFELKPSANSAFVRVKPSNSGDEEVIRGFVPYKRCKF Q</aaseq>

Gene Sequence

<dnaseqindica>2057..2710#1599..1964#1362..1423#1146..1257#872..1009#272..295#gtttcctcttcctctcgcatcctagcggcagcggcagcggcagcctcctcctcctccgccgccgccgctcctcttccctctcccaactcccgtacgggcgtacggccgcctcgtcgccggattttttttttcgttcccccggcgagcttgcactctcttttcttcgattctctttcggctttgcttcttcggtcgcttttttttttggctgttcctggtcgatcccggcgaaggaggtggtcgggaagcaagatttgaactactcctcctcatggcttccatgccgcagctggaggtaaagatctcctcatatatagccaggttgctcttctttttctttttctggccttgcgcaaccgctgatagagagtttgatgatgatttgtgtggtcatttgcttaactttgcagattttatttgcaaaaatatatttttcctggaccgatccattattattgcctaaaaaaacaaatgtattgcaattttttagttaaaaaatgggagtgttctagatgcttctctcctggttctggggcggatacacgtcataattatctatctttagaggcttccagaacgacatgggatggccaatactcctcctatactctctctctccaataacggcacgaatcctcaattaacaaatccttctgcctctgcttactggagtactacactacactaggtagcaattctgtttctactactactttttactagtaattatccctccctttgcagcggtaagtggtactagtaactacggagttgttgttgtaaactgtctgcggcaattgcaaattatacgagtacttgtgtatgcttttgctaaagcactgaactttgtgttcctctcctggccatctaggaaaaggattcatccgatttggcaatcaacaaaggcccgtcgctggatcttgtcaaatctcccttgatgatgaatgatgcatctgcaactgtaactgcaatgcagcccaacgaggggatggaggagttccctgtcaaggtacttttgacatctatgcaagccgatccttcttcactagcatgtcttactggcagagaggaacagaaaaaattgtacttctagcttacagcgttgtcactgtacctaacaatctccaacccaatgtttgaagcaggttcggaagccttacacgatcaccaagcagcgggagaagtggacggaagaagagcacgacaagttccttgaggcattgaagctgtatggtcgctcttggcgtcagatacaaggtgcgttttggcctctctctctctctcttcatatttttgccttacattaggctttaaacaagttcagtgagtagtatgtctgatttgtccaagctgttctctagagcacattggcacaaagactgctgtccaaattcggagccatgcccagaagtttttctcaaaggtgatataataatccttcatgtaccaattgatcaatctgattgatttattactacactgccgatgctatatttttctctatatatatattacatgtgcttgtaaagcagaattggtaacagtaaacttgaaatggcatgctcaaacgtttctaatgcgggggctttatttagcaggtggtgcgtgagcccggttccaataatgcgattgagatccctccacctaggccaaagagaaaaccacttcatccgtaccctcgaaagtgtgcgaattctggatcggacgcaaatccagcaacagcgcaattgaagcttgctcctggctcatcttcatctggctctgatcaagagaatggttctcctatatcggtgctatctgcgatgcagtcagatgcttttggatcgtcagtatccaatccatcaaccagatgtacctccccagcgtcatctgacgatggaaataacattcccacattcacgagtggggaagataataatgtgccttgtgaaccaacagtgatagatccgtcccagtcccacaaggtaaacatccatccttcgaatgaatctttttgtcaaacatggtaaatcgccacttcatcagcttattagggttatacatgtttctgtcacaggaaatagaccaagatagaaaagacgtgaataatatgtctgaagaggattcttcagaagaagaggtgcaagaaacaagcttgaagctatttgggaggacagttgtcatcccagatccaaggaagagaagctcctcagatccgaagcatgaaagtgaggagcagatatcacagccttccaatgaagaaatgttgcaggcttcttcatcggttggggagattccagcggcatattgtgcaccaaatggttggtttatgtcatacaattctttcccattccaattcggtgaatcagcggcagatgctagaattccccctttacacgtgtggtggccttactacggttttgctcccattagccatcctagaggactaagcacagtgatgcagcagactgaaggtagtgacgagagtgacggtgtgaagagccactcatccgaatcaagttcggactccggggaaaatgtgcagatgaccgctccccagagctcgagaatagtggaatcacttggagcgatttacgtccgagactcaggttcaagttttgagctaaaaccgagcgcaaattcagcgtttgtaagagtgaagccaagcaacagcggagatgaagaggtaataaggggatttgtgccttataaaagatgcaaatttcaataacgcaggcaagcgggtattttcttgaaagctgctaatttaacagagaagagtaggagcacgaacgttgcttgcatcactgtatttttttttgtttgtttgcggggattggtggtgcattaatgaattgtttgctgcttgcaccttaaaaaggatagagatggtgtaagcagtttgttgctgtaagaatgttacatgtagactagtacttaaaattataggggatgccaatctctgccctgatgatgttgtaaaagcagtacgcaccatgttttacctctggttgaaagctaagctgttaatggaaattgatctc</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0728700, RefSeq:Os06g0728700