Os02g0743700

From RiceWiki
Revision as of 19:22, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os02g0743700

Description

Similar to RING-H2 finger protein ATL1Q

Version

NM_001054632.1 GI:115448634 GeneID:4330702

Length

4273 bp

Definition

Oryza sativa Japonica Group Os02g0743700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:32077828..32082100

Sequence Coding Region

32077887..32077998,32078175..32078353,32078619..32078702,32078994..32079158,32079886..32080008

Expression

GEO Profiles:Os02g0743700

Genome Context

<gbrowseImage1> name=NC_008395:32077828..32082100 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:32077828..32082100 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggaggtcgcggccgcggaggacgcgctggaggagagcggcgtggcggtgtacctccccaggcttctcgccggcgtcatctccggcgctctcaccggcctcttcgctctcgctggggccttgaccggagcggtgaccggcgcgctggccggaagggcttcagacagcggcgtgctccggggagctggattgggggcgttcgccggagctgtgctctccattgaggtcctcgaggcttctcgtgcttattggtgctcggaccggctgggctctcatggcacatcctccatggcagatttcatagagcagctcctccaagcgcggtttgtgcaagagcaaattgtaccttcaggatatgcaacgcatcgttggcaggtcagcatttcagattttggtcatgatgatctgtatgatatttttggagattgttcatccaaagggctttcacgggagtcactgaataaattaccacactatgtggtcactgaccaaacacggaactcgtttggtgaagacctctcttgcactatctgcctgcaggatattgtaaccggtgaaacggcgaggagattgccgaattgctcccacactttccaccagccttgcgtggacaaatggctcgttggccatgggtcttgccctgtatgtaggcaatgtgtgtaa</cdnaseq>

Protein Sequence

<aaseq>MEVAAAEDALEESGVAVYLPRLLAGVISGALTGLFALAGALTGA VTGALAGRASDSGVLRGAGLGAFAGAVLSIEVLEASRAYWCSDRLGSHGTSSMADFIE QLLQARFVQEQIVPSGYATHRWQVSISDFGHDDLYDIFGDCSSKGLSRESLNKLPHYV VTDQTRNSFGEDLSCTICLQDIVTGETARRLPNCSHTFHQPCVDKWLVGHGSCPVCRQ CV</aaseq>

Gene Sequence

<dnaseqindica>60..171#348..526#792..875#1167..1331#2059..2181#gcacgcggcataccaagaaaccgcgcggcgcgcgcttcccgggggggcgcctgccttcgatggaggtcgcggccgcggaggacgcgctggaggagagcggcgtggcggtgtacctccccaggcttctcgccggcgtcatctccggcgctctcaccggcctcttcgctctcggtactcaccaaaacacccgccccttctttccccccttgctcgagctgttcatgtgattctttgacgccagcgacagcgagcattgcccgtgagagctcgttctttgctggcctcgcgtcgcgtacgtgttccgatttttttttatgtccgttgtttgatgtggtgctttgtaaaagctggggccttgaccggagcggtgaccggcgcgctggccggaagggcttcagacagcggcgtgctccggggagctggattgggggcgttcgccggagctgtgctctccattgaggtcctcgaggcttctcgtgcttattggtgctcggaccggctgggctctcatggcacatcctccatggtcagtaagcttcttccatacttgcatatttgtttgtccaagaagttatattaatgcgtttgacttcagatgatgtgacctgaagtatttgacgaatttatttctctgaaagatatatgctcattagcctgatgtaacttcttccaatatgctgtgccgtttactttactcctcgacggcttgacaccatgattttgaaatgtatctctcgtctgtgtttgtaagatacgcctctaagaaaaattcataacgatttggtgttcaggcagatttcatagagcagctcctccaagcgcggtttgtgcaagagcaaattgtaccttcaggatatgcaacgcatcgttggcaggtcagttacatgttctgctgatgcaattttgtttgccatggttctcattttataaaatgtttttttatgtgaaaaacctgatctgctggccatcatttcattattctatttgcaaaattggtagttttaaaccactttatttagttgagacaacggtacaaatttattggctagtaggcccgggtactttggaaacgatgttcggttcgcagaatcaccgtttattggaacacatcgttatttattgaagcattttcttttactgattttttttatgttctttgtcaacaggtcagcatttcagattttggtcatgatgatctgtatgatatttttggagattgttcatccaaagggctttcacgggagtcactgaataaattaccacactatgtggtcactgaccaaacacggaactcgtttggtgaagacctctcttgcactatctgcctgcaggtacatttatcaaaattagctttatgttgtcgacaaacctgcctggctgccttgcacaattttgcacatggtttaggttcaacaacgataataaaagcaaaacaacatccatttcatgattgcagacaatatagtgaatgtttagttagcatatttgagctttctcctttttggcaaagtttgttaagaaaatcaagatcaccagtgatttgaaaattggtgatagcataccactacaagtctccatctggttgttagtgatggctgatcacatatagtagtaactgttctaaacataattgccaagggggtaaatgggaagacatcttcaaattattcatgaaattcttttgaccttcttcatagaacgttttaaacctaactcgtcctgaccattgaatacggtctattacttgatcaatgatttccaaccagaaaccaaagcttttcccgaccttgttgaaccaggaaatgcggcccattttttagattgataaatgaaacattcaagtacatatatatagctggatagtagatatgacatgattgttatggtgtgatatgtagagcagggagatgcaacgacctccgtttttatgttccccttttgtggcaacttgcataccaaattatgcctgctactaaatgcaatgtggttaggatttgctttgcaacttgctcactccctacacacactcaatgtcactgcttaattaccgctttgcaggatattgtaaccggtgaaacggcgaggagattgccgaattgctcccacactttccaccagccttgcgtggacaaatggctcgttggccatgggtcttgccctgtatgtaggcaatgtgtgtaacaacagaaggtaaaaaaaaccctgcattctgcaggctctccatcttattagaagagactagttgtgcaaatgtttgctcttgatagcacccaccacagagttaattatacacagtagctttgtaatttactgtactactagataggcgtatcttttaccagcgtaaacagaggctgtaaatcagaggatttgacactgtttcttacgctgagtttcaatgtaaaatggaataaaggtttctctgtcgcggagctcttcaaggccctggacctggagaatatgctaaggccatactaggaaatggctacatagtcagccgtttttacttgctgttgtacagtgtacggtgtatacaaatgtgatggttttttttagaatatcgattaattatagcccgtgcatgtgggaagcccagcaactccaagatcgtgtagtgatggccgcattgataatctgatagggcttccaaagattaggcaggacccgttgtcgtggtcgccatgcctccctgttgtgcccattcctcattcccatccaagcaactatgcaaaggcatcaacagatcaacttacggcggttcatcagtccatggcaacgttcaatcgcccggccatgctgccgatgtcccttgcagaatagctgtatcatgatatcatcagctgcatcactgttcctacgtagtgctgcggctgtgcctcctccgcctgtgcgcgtccgtttcgctcgccactgtttggctatggggaggagaaagagaaaccggggcagtgcgcgtacgagaaagttgattgggttcctgatgttgatggaggcggcagcatcctagtacagcgtcgcatctcatcagagagtaggcgagcagcagccgccaactgctggatggtcgtagtcgcggctcagaatctttgcccaccttggcgctgctgatgttagtccccctgtcacccgccaccaacaatccgcccagataggctgccctcagggctcgcaggccagcataccaattccggccgcattcagtacaaataagaactactcgtagcctactactactatagtactacaacgtactgcagaatacaggataaaagattccccagaaacaagagcaaaaaccaaagagagaggaactgcatttgctttgtagatgccgatatccatttgcacaaccaccagagcttagagcacaaaatctcgaccatgttactgctgagtagatacaggataaggtgtttaagaggaaggtttctgaataggtgcagcttcatgtttatagactaacattgtgtgactaccaggctatgattcgaggattactagttaccatagagctaaatcgtactagcagagaagtcttcagtatttgagcttcctaacccggtacaaaaaagatgatgtgaccttctgttctgtgtctgaacttctattctctgtcaaaggatgatgtatgtacacttcttgggttcaacatcctcaatttttgccttaggaatccatatgcgagtactgcaagaaatagctgcatcagatacattgaagcaccaacaaacaaacggtggcaaagtacaaacagaactacaggattcagaaaatgagaggttaaagaaaaagggaggaaaggtagcagaaagcctgaaactcgcctgggcattcttcagaagttcctcttgctggatatcatcacttgttgcaggatccatagctctctgatgaatcaatcagaaatgtgaagacaaattagtaaacttgatcagtggtaactgaatcgattgtgcatgaaggggcagaaattcattgccttgggcaatccatgacttagtatcctcacaatagtctctttggcctcaacatcacaatcacggagttcaggtactttcatgtcgcgggggtcaagttcagggtcaccttttatcactgatgtccaccattccttctggttttcctttgtcaaaagtatagacagtgtattcccatcctctgaaggaattatcacaaaataatgcatgtcaagtcagtaacaagagtcatgtaggtattgctatcgatgagaaatgtaacaagtatcatcaaactatgtatgtaccaatggtcc</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0743700, RefSeq:Os02g0743700