Os06g0730300

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Revision as of 09:36, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os06g0730300| Description = Protein of unknown function DUF829, eukaryotic family protein| Version = NM_001065190.1 GI:115470111 GeneID:4342146| ...")
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Gene Name

Os06g0730300

Description

Protein of unknown function DUF829, eukaryotic family protein

Version

NM_001065190.1 GI:115470111 GeneID:4342146

Length

3252 bp

Definition

Oryza sativa Japonica Group Os06g0730300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:32004432..32007683

Sequence Coding Region

32005543..32006213,32006299..32006404,32006635..32006837,32007114..32007405

Expression

GEO Profiles:Os06g0730300

Genome Context

<gbrowseImage1> name=NC_008399:32004432..32007683 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:32004432..32007683 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgatggcttcgctccaccgccccctctctgccatggcagttgccgcctttgccgccgtctcctcccttgagctgcctgacaggctgtctcaccacaagttgcctgacacaaccgtggatgccgaagctgtcgtctcgattccagccagcaggcccgatgtatcagcagcaccttctgcttctgccatgtctcgcctgcacttcctgccacgcaatctgcagacttcgcacccggctaaggcgcctcctgcatctttgcctgtcatccacacggtttaccactatgcaaagtttgccaaatactactcggaagaggaggcagtgacgactgcgatgccatcctcgtcatcgccggatgttctgtacctctggcatctgccggaccctaaggtctgcggtgactcacatggcaagtctcagacagtggtggttctgctcgggtggttgggctcgaggcagaagcacctcaagagatatgccgattggtatacctccaggggttaccatgcagtgaccttcaccctccccatgtctgacattgttagctacaatgttggagggaaggctgagaagaatgtagagatgctctcagaacatctcgctgattgggttagcgaggaggatgggaagaagattgttttccacaccttcagtaacactggctggctttgctatggggtgatactggagaatttacagaggcaggatccttctgcaatggacaaaattaagggctgcgtagtggactcagcgcctgttgctgtccctgattctcaggtttgggcttcaggcttctcagctgctatcatgaaaaaacacagcgtagcggcaaaaggagtgaaaccaaatgatgcaaggcccgatgtcctagttgtggagtctaacaaggatcatcccaagccagcagttagcgaggccattctactttcagcgctggagaagttgttcgatgttgttttaaactacccagccatcaataggaagttgtcgggtgtgatggagctattgtcgtcgaagcagccaaaatgcccacagctgtacatatacagctctgctgacagggtaatcccggccaagtcggtggagtcgttcgtggagagtcaacggcgagccgggcatgaggtgagagcatgcgactttgtgtcgtcgcctcatgtcgaccactaccggagcaatccagagctgtatacctctcagctcactgaattcatggaggactgcgtgttggcccgctgccaggcgaaggaggaggaggaggaggtcaccaactaa</cdnaseq>

Protein Sequence

<aaseq>MMASLHRPLSAMAVAAFAAVSSLELPDRLSHHKLPDTTVDAEAV VSIPASRPDVSAAPSASAMSRLHFLPRNLQTSHPAKAPPASLPVIHTVYHYAKFAKYY SEEEAVTTAMPSSSSPDVLYLWHLPDPKVCGDSHGKSQTVVVLLGWLGSRQKHLKRYA DWYTSRGYHAVTFTLPMSDIVSYNVGGKAEKNVEMLSEHLADWVSEEDGKKIVFHTFS NTGWLCYGVILENLQRQDPSAMDKIKGCVVDSAPVAVPDSQVWASGFSAAIMKKHSVA AKGVKPNDARPDVLVVESNKDHPKPAVSEAILLSALEKLFDVVLNYPAINRKLSGVME LLSSKQPKCPQLYIYSSADRVIPAKSVESFVESQRRAGHEVRACDFVSSPHVDHYRSN PELYTSQLTEFMEDCVLARCQAKEEEEEVTN</aaseq>

Gene Sequence

<dnaseqindica>1112..1782#1868..1973#2204..2406#2683..2974#gaggttaactaggttgaggttgggcgagagagggaggaagggaggcggcgccggcacccccctccccgtccccggccgccgcgcccccccccccccaagcttccctccctcccttccgcaatctctcctctcctcttggcgacagctaccaggtaaatctctctccttccttccttgtgcctgcctgcctggtaagcgtcgacgacttccccctccatccatgatccatggattcaattcgattctccttcatcctgccttgcacatgcacccccctgctatagcctacagatcgatcgatgatttgttttccttcaattaattgcgacgaccaagggggcgaattgatttccttccagctttcctggaacaagttcctttctccgagtcagagtcaaagcacccttgttgttctttcttccttccttcttctacgcatctcattctccctccctctaatgctgcgtgaagggaaagcaggagctcctcctttcttgcttgccgtgtcacctctagtctcctcttgtgaatttgtgacgacgcctccttcctttattgtttctttgttgcaaaagaaaaagaaaggcgtttcttcggtttcgtttttactaccgtcccatcaatttctgactaactgccttcttcccttgtctgacgagttggatttctcgattgcaggaaacaaggaaggagcaacgcaacagtgggagggattaattaagcttaccgggcttggctgtcaatttgacctctccaattccacctccacaggtaaaaataacttattttgacccttccgacaaagacatcatcatcaacccattttttttctttcttctctgctgagattattgcgagatttggtcaattgggacacaaataatgtgcctatcatacttgttcaattgcctacgccacgcatatgcttttattagtatttccaaccgaatcctattcaattcaatttttgcaaaccgcgtgttatgaccggatcggactgacagctaactctggttgttcctttcctctcctcctatgaaacagggtagggcaacacgaggccggagactaaacaacaatctgattattcacaacaacttctctcctctccatgatggcttcgctccaccgccccctctctgccatggcagttgccgcctttgccgccgtctcctcccttgagctgcctgacaggctgtctcaccacaagttgcctgacacaaccgtggatgccgaagctgtcgtctcgattccagccagcaggcccgatgtatcagcagcaccttctgcttctgccatgtctcgcctgcacttcctgccacgcaatctgcagacttcgcacccggctaaggcgcctcctgcatctttgcctgtcatccacacggtttaccactatgcaaagtttgccaaatactactcggaagaggaggcagtgacgactgcgatgccatcctcgtcatcgccggatgttctgtacctctggcatctgccggaccctaaggtctgcggtgactcacatggcaagtctcagacagtggtggttctgctcgggtggttgggctcgaggcagaagcacctcaagagatatgccgattggtatacctccaggggttaccatgcagtgaccttcaccctccccatgtctgacattgttagctacaatgttggagggaaggctgagaagaatgtagagatgctctcagaacatctcgctgattgggttagcgaggaggatgggaagaagattgttttccacaccttcagtaacactggctggctttggtattaattatgctcttcctctcgttaacaattagcattcattctgagatttcgggcttaattttttttatatctgttgcttcagctatggggtgatactggagaatttacagaggcaggatccttctgcaatggacaaaattaagggctgcgtagtggactcagcgcctgttgctgtccctgattctcaggtatattagaacacgtaactttattggaacaaaagtagggtttgctatttaattgcatggttcaaagaactcatcgtgagcattcgagatgattttatgcttcttgaactgttggctaattgtctctttgtgcgcacctgtgttgcattgttgtgtcaaatggacgtgcttcattattatttcattctttcacatttgcagttactttgccatgttttgttggaacacaggtttgggcttcaggcttctcagctgctatcatgaaaaaacacagcgtagcggcaaaaggagtgaaaccaaatgatgcaaggcccgatgtcctagttgtggagtctaacaaggatcatcccaagccagcagttagcgaggccattctactttcagcgctggagaagttgttcgatgttgttttaaactacccagccatcaataggtaaacatctcagccatgttcacaagtagtcattagcattttgagaaaagttgggtcttatctctgtgccttttattccatccaatccaactgttgtggtctgtctctgtctggtcacaccacaattgtgcattgtttgattgatgcttagaaaaattggtccataaagtgtatgactttgattgaatctcagttaagtatagaagatagatgcaggccgttgacaataacaaataactgattgataagcaactttacttttggttttaacaacaggaagttgtcgggtgtgatggagctattgtcgtcgaagcagccaaaatgcccacagctgtacatatacagctctgctgacagggtaatcccggccaagtcggtggagtcgttcgtggagagtcaacggcgagccgggcatgaggtgagagcatgcgactttgtgtcgtcgcctcatgtcgaccactaccggagcaatccagagctgtatacctctcagctcactgaattcatggaggactgcgtgttggcccgctgccaggcgaaggaggaggaggaggaggtcaccaactaactaagatgatgatggtggtgatgtgcaactgccataaaatagagataggcatacataccaactgttattttcattcattcttcactggcgctcaattgcaaagagaaaaataggtgccaggagaggagtattactagtacttttttttagacaggagagcgagtacactactgttttctttcgtctcgtctcatactctcattggtgggattgactttcaatcaattgtaaacacgttgctagaagaaaacaaaaaggaaaatggtggttactgactc</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0730300, RefSeq:Os06g0730300