Os06g0731200

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Revision as of 09:36, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os06g0731200| Description = Similar to ABC transporter-like protein| Version = NM_001065197.1 GI:115470125 GeneID:4342153| Length = 5140 bp| De...")
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Gene Name

Os06g0731200

Description

Similar to ABC transporter-like protein

Version

NM_001065197.1 GI:115470125 GeneID:4342153

Length

5140 bp

Definition

Oryza sativa Japonica Group Os06g0731200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:32046700..32051839

Sequence Coding Region

32047127..32047148,32047240..32047534,32047676..32047824,32047919..32048395,32048481..32048777
,32048877..32049727,32049820..32049893,32050173..32050207,32050380..32050526
,32050612..32050675,32051001..32051273,32051414..32051490,32051589..32051815

Expression

GEO Profiles:Os06g0731200

Genome Context

<gbrowseImage1> name=NC_008399:32046700..32051839 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:32046700..32051839 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgggcatggcggccgtcctgctcctctcctttctcctcttggccgcccccgccgcggccatcaatatcctccggcgctccctcgccgcgcagaccaaaggagacctcgcctccatcaccgctgggaaccccctcgtcgccaatgccatgaacgaccgcctcaagaacctcaccgacgcatttgctcagcagatgggcaaggagttccactactgcatcaaggacacggacgacgagtggaatatcgccttcaatttctccactgatcccaccttcctctccaactgcatgcaggccaccgatggagacgtaccgcagcgtgtgtgcaccgccgctgagatgaagttctactttgaaagcttcctcgacagcaatggaagaaagaactacgtgaggcccaacaagaactgcaacctcacatcatggatggatggctgtgaggctggctgggcatgcagtgcaggcccggaccagaatatcaacttgcaggatgccgtcaacttcccttccagaacacttgattgccgaggctgctgtgctggattcttctgccctcacggcctcacttgcatgataccttgccctttgggagcatactgtccagaatctaccttaaacaaaaccaccgggatctgtgacccatacaactatcagccacctcctgggaagccgaatcatacttgtggtggtgctgatagatgggcagatgttgttagcaccgatgatgttttctgcccagccggcttctactgtccaagcactataaagaaactctcttgtagtagtggtttctattgcaggaagggatcaacttcccaaaccaaatgcttccacaagggcagctgtaaaccaaactctgtaaatcaggacattacaatatttggtgcattgcttgtgggtgccttgagtttagtactgttgatcatttacaacttctcagggcaacttctgaccaaccgagagaaaaagcaagcaaaatctagggaggctgcagcaagacacgcaaaagagactgccatggctcgtgaaaggtggaaatcagctaaagatgttgccaagaagcacgccgttgggctgcagtcatcgctgtcccgcacattctcgcgcaagaaaactcttaggacacacgagccatccaaaggagcggttgaaactgatgtggagccatcgaaaggatcaggagaaaagaagagtaatcttactgacatgatgcgctcgcttgaagagaacccggaaaaaggagaaggcttcaatgtggaaataggagaaaaaaagaaaactaaagggaggcatgcacacactcagagccaaattttcaagtatgcatatggacagattgagaaggaaaaggcaatggaacagcagaataaaaatctgaccttttcaggtgtgatatctatggccaccgatgaagatatcaggacaagacctagaattgagattgctttcaaagaccttactctaaccttaaaggggagtaagaaaaaactgttaaggtctgtgaccggaaagcttatgcctggtcgggtagctgctgtgatgggcccatcaggtgcagggaagaccacattcttgagtgcaattgcaggtaaggcaactggatgcgagacaacaggtatggtacttatcaatgggaaaatggaacccatccgtgcgtacaagaaaatcattggctttgtcccacaagatgacattgtccatgggaacttgactgttcaggagaatctttggtttaatgcacgatgcaggctttctgctgacatgtcaaaagctgacaaggttcttgttgtggaaagagttatcgaggctttgggactgcaagcagttcgtgattctttggttggaactgtcgaacagcgtggcatctctggtggccagcgtaaacgagtaaatgttgggctagaaatggtcatggaaccctctgtgttgattttagatgagccaacgtctggtttggacagctcttcgtctctgcttttacttcgtgcactacggcgggaagctcttgaaggtgtgaacatctctatggtggttcatcaacccagctatacattgtataagatgtttgatgatttgatacttctcgcgaaaggtggcttgacggtttaccatggacctgtgaagaaagtggaggaatacttttcaggattggggattgttgtcccagatcgtgtgaacccgccagactactacatagacatcttggagggaattgtgaagccaaacgcaaatgttgcagttaatgccaaagatctccctctgcgatggatgctgcacaatgggtatgaagttccacgggatatgctgcagagtggttctgatgcagaatcgtcgtttaggggaggaggggatcttacccctggcggtgacactgggcagtctattgctggtgaagtgtggggcaatgtcaaggacatagttgggcagaagaaggatgagtatgattacaacaaatcttctcaaaacttatctaatcgatgcactcctggcattctcaggcagtacaagtactacctggggaggtgtggcaagcaaaggctccgtgaagctagaatacaaggcgttgactatctgatcctgggccttgctggtatatgtctagggacattagctaaagtgagcgacgagacgtttggagcactcggttacacatacactgtcattgccgtctctctgctgtgcaagattggagcgctgagatcattctctctggagaagatacactactggagggagagagcatctggaatgagctcgttggcgtacttcatgtcgaaagacacaatagatcacttcaacacgatcatcaagccgatcgtttacctgtccatgttctacttcttcaacaacccaaggtcgtcgatatgggagaactacgtagttcttgtggcgctggtgtactgcgtgacagggatcggctacacatttgcgatattcttccagccaggatcggcacagctggtaagtggtcagcgctgcttccggtag</cdnaseq>

Protein Sequence

<aaseq>MGMAAVLLLSFLLLAAPAAAINILRRSLAAQTKGDLASITAGNP LVANAMNDRLKNLTDAFAQQMGKEFHYCIKDTDDEWNIAFNFSTDPTFLSNCMQATDG DVPQRVCTAAEMKFYFESFLDSNGRKNYVRPNKNCNLTSWMDGCEAGWACSAGPDQNI NLQDAVNFPSRTLDCRGCCAGFFCPHGLTCMIPCPLGAYCPESTLNKTTGICDPYNYQ PPPGKPNHTCGGADRWADVVSTDDVFCPAGFYCPSTIKKLSCSSGFYCRKGSTSQTKC FHKGSCKPNSVNQDITIFGALLVGALSLVLLIIYNFSGQLLTNREKKQAKSREAAARH AKETAMARERWKSAKDVAKKHAVGLQSSLSRTFSRKKTLRTHEPSKGAVETDVEPSKG SGEKKSNLTDMMRSLEENPEKGEGFNVEIGEKKKTKGRHAHTQSQIFKYAYGQIEKEK AMEQQNKNLTFSGVISMATDEDIRTRPRIEIAFKDLTLTLKGSKKKLLRSVTGKLMPG RVAAVMGPSGAGKTTFLSAIAGKATGCETTGMVLINGKMEPIRAYKKIIGFVPQDDIV HGNLTVQENLWFNARCRLSADMSKADKVLVVERVIEALGLQAVRDSLVGTVEQRGISG GQRKRVNVGLEMVMEPSVLILDEPTSGLDSSSSLLLLRALRREALEGVNISMVVHQPS YTLYKMFDDLILLAKGGLTVYHGPVKKVEEYFSGLGIVVPDRVNPPDYYIDILEGIVK PNANVAVNAKDLPLRWMLHNGYEVPRDMLQSGSDAESSFRGGGDLTPGGDTGQSIAGE VWGNVKDIVGQKKDEYDYNKSSQNLSNRCTPGILRQYKYYLGRCGKQRLREARIQGVD YLILGLAGICLGTLAKVSDETFGALGYTYTVIAVSLLCKIGALRSFSLEKIHYWRERA SGMSSLAYFMSKDTIDHFNTIIKPIVYLSMFYFFNNPRSSIWENYVVLVALVYCVTGI GYTFAIFFQPGSAQLVSGQRCFR</aaseq>

Gene Sequence

<dnaseqindica>4692..4713#4306..4600#4016..4164#3445..3921#3063..3359#2113..2963#1947..2020#1633..1667#1314..1460#1165..1228#567..839#350..426#25..251#cctacagctagcttatcgatcggcatgggcatggcggccgtcctgctcctctcctttctcctcttggccgcccccgccgcggccatcaatatcctccggcgctccctcgccgcgcagaccaaaggagacctcgcctccatcaccgctgggaaccccctcgtcgccaatgccatgaacgaccgcctcaagaacctcaccgacgcatttgctcagcagatgggcaaggagttccactactgcatcaaggacacgtacgtacgatcattcattcatttacccgctcccatctccatgcatcttccaattgtttttcttttctttcttctctacatacatacatacattacagggacgacgagtggaatatcgccttcaatttctccactgatcccaccttcctctccaactgcatgcaggccaccgatggtacggtacttcatttcaatccattattatattcctccttccctccctccgtcttatatattgagatgagtattatatattatactccattgattattaatttctcgattaatatatatattcgatcgatcggtcaacaggagacgtaccgcagcgtgtgtgcaccgccgctgagatgaagttctactttgaaagcttcctcgacagcaatggaagaaagaactacgtgaggcccaacaagaactgcaacctcacatcatggatggatggctgtgaggctggctgggcatgcagtgcaggcccggaccagaatatcaacttgcaggatgccgtcaacttcccttccagaacacttgattgccgaggctgctgtgctggattcttctgccctcacggcctcacttgcatgatacgtacgcattctactagtctactctatcatccatgcatcatcatatcctgtcaattaaaaaaattgcgtacatgtatgtaataccaagagtattaattaattgatcaacggctatctacatatatacataatgagtacatgaggtagatagcacaataccttactgcaaataacacaaatatggtcctctctctatacacacacacataagatcttcaagggagaccttctctggcttgttattttttggagttgagacttaatttcaagatttacttcttgcagtatacaaacattctgattagctacatccactatgcatgcagcttgccctttgggagcatactgtccagaatctaccttaaacaaaaccaccgggatctgtgacccgtaagtacatacttgcatttctctccactctccagtatgtggaaagactctggattgttttaccaatattaaatacttggtgcagatacaactatcagccacctcctgggaagccgaatcatacttgtggtggtgctgatagatgggcagatgttgttagcaccgatgatgttttctgcccagccggcttctactgtccaagcactataaagaaactctcttgtagtagtgggtaatcctatctaacaaatgcttcaattgtaaactgaccaacctcctatagaatggttctcatgctattacatatgctactaattttttagttgctttaggtgacaggaagcattttaagatttatgtcctcgccaaatactgacagatttatgttgcttgcacctttgcagtttctattgcaggaagggatcaacttcccaaaccagtaagttatatatatgccagacccaatggctacttctctactttaaccatgtgacaatgtatgtgtgtgaatcggaatgacacatatctaatacaataaatttgtacatactccccatcttaatgaaatttgatcggcctttccttcggccgacccggcaaaaataaataaatgtaaccacatacttcactgttttttttggtatacatctcctgggtgttacctgcttcttgaaattgccagcttctgagagtagttgctttattttcttaactgcagaatgcttccacaagggcagctgtaaaccaaactctgtaaatcaggacattacaatatttggtgcattgcttgtggtaaagtacaactgtagtgtgctcaatagtactatgattgttccaatctagctatgaagttgagcttactctgctcttttacgactctgtagggtgccttgagtttagtactgttgatcatttacaacttctcagggcaacttctgaccaaccgagagaaaaagcaagcaaaatctagggaggctgcagcaagacacgcaaaagagactgccatggctcgtgaaaggtggaaatcagctaaagatgttgccaagaagcacgccgttgggctgcagtcatcgctgtcccgcacattctcgcgcaagaaaactcttaggacacacgagccatccaaaggagcggttgaaactgatgtggagccatcgaaaggatcaggagaaaagaagagtaatcttactgacatgatgcgctcgcttgaagagaacccggaaaaaggagaaggcttcaatgtggaaataggagaaaaaaagaaaactaaagggaggcatgcacacactcagagccaaattttcaagtatgcatatggacagattgagaaggaaaaggcaatggaacagcagaataaaaatctgaccttttcaggtgtgatatctatggccaccgatgaagatatcaggacaagacctagaattgagattgctttcaaagaccttactctaaccttaaaggggagtaagaaaaaactgttaaggtctgtgaccggaaagcttatgcctggtcgggtagctgctgtgatgggcccatcaggtgcagggaagaccacattcttgagtgcaattgcaggtaaggcaactggatgcgagacaacaggtatggtacttatcaatgggaaaatggaacccatccgtgcgtacaagaaaatcattggctttgtcccacaagatgacattgtccatgggaacttgactgttcaggagaatctttggtttaatgcacgatgcaggtactatttttgtagtagtagtatatttcaatagatcctgtgatggattcactagtggctagggaacttggactgatgaatatattttatcttgcacaggctttctgctgacatgtcaaaagctgacaaggttcttgttgtggaaagagttatcgaggctttgggactgcaagcagttcgtgattctttggttggaactgtcgaacagcgtggcatctctggtggccagcgtaaacgagtaaatgttgggctagaaatggtcatggaaccctctgtgttgattttagatgagccaacgtctggtttggacagctcttcgtctctgcttttacttcgtgcactacggcgggaagctcttgaaggtgtgaacatctctatggtggttcatcaacccaggtaaggttgtttgctctttttctccacaactttatatgcaccactcactcatgcaactttatgctgagtttattttcttttgcagctatacattgtataagatgtttgatgatttgatacttctcgcgaaaggtggcttgacggtttaccatggacctgtgaagaaagtggaggaatacttttcaggattggggattgttgtcccagatcgtgtgaacccgccagactactacatagacatcttggagggaattgtgaagccaaacgcaaatgttgcagttaatgccaaagatctccctctgcgatggatgctgcacaatgggtatgaagttccacgggatatgctgcagagtggttctgatgcagaatcgtcgtttaggggaggaggggatcttacccctggcggtgacactgggcagtctattgctggtgaagtgtggggcaatgtcaaggacatagttgggcagaagaaggatgagtatgattacaacaaatcttctcaaaacttatctaatcgatgcactcctggcattctcaggcagtacaagtactacctggggaggtaaaagaatggagtattttttcttactatatatcactgccattcttaaatatgtatatataagcattactcttgttttcttcattctgttcaggtgtggcaagcaaaggctccgtgaagctagaatacaaggcgttgactatctgatcctgggccttgctggtatatgtctagggacattagctaaagtgagcgacgagacgtttggagcactcggttacacatacactgtcattgccgtctgtaagtttctcagcccatcctggaaaggagtcttttttatccatgaattattttcagagaaataatgtttatataatacgtaatgagaaaataagtaagtagtaaaaataaggtaataagcgtgggatatattaattgcagctctgctgtgcaagattggagcgctgagatcattctctctggagaagatacactactggagggagagagcatctggaatgagctcgttggcgtacttcatgtcgaaagacacaatagatcacttcaacacgatcatcaagccgatcgtttacctgtccatgttctacttcttcaacaacccaaggtcgtcgatatgggagaactacgtagttcttgtggcgctggtgtactgcgtgacagggatcggctacacatttgcgatattcttccagccaggatcggcacagctggtaaggtagtacgtactgttgaattagtacgtagtatatatgatggatgatgaatgattaattgattaagcaattaaaatgatggggatggatcagtggtcagcgctgcttccggtagtgctgactctgatagcaacgcagcagaaggacaccttcttcgcgaacctgtgctacaccaagtgggcgctggaagggttcgtgatcgcgaatgcgcagaggtactcgggcgtgtggctcataacgcgatgcggctccctcctcaagagcggctacgacatcaacgacaggttcctctgcattctcgtcctcgccgccaacggtgtcctcttccgctgcgtcgccttcttctgcatggtcatcttccagaagcactgatgcctgcctgcctgcctgtctcctctactgtacatctatctccatctattatactctctctagtactactgtactttctactctctagctagctagcagcagcatctgtgagcatgtactgtacttgtgtatcctactaatgaatcctagctaagctagtagatcgatcc</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0731200, RefSeq:Os06g0731200