Os06g0731900

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Revision as of 09:36, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os06g0731900| Description = Protein of unknown function DUF707 family protein| Version = NM_001065202.1 GI:115470135 GeneID:4342160| Length = 51...")
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Gene Name

Os06g0731900

Description

Protein of unknown function DUF707 family protein

Version

NM_001065202.1 GI:115470135 GeneID:4342160

Length

5112 bp

Definition

Oryza sativa Japonica Group Os06g0731900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:32089405..32094516

Sequence Coding Region

32089535..32089627,32089760..32089912,32090129..32090212,32090354..32090472,32090672..32090773
,32091974..32092093,32092188..32092253,32092466..32092532,32092623..32092676
,32093345..32093437,32093907..32093939,32094033..32094131

Expression

GEO Profiles:Os06g0731900

Genome Context

<gbrowseImage1> name=NC_008399:32089405..32094516 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:32089405..32094516 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgaagcctccgcggcgccgctatggtttactcgcggtggtcgtcactctcatcgtcctcgcctccctccagatccagttccaccacctcaaggaggaccgtctcaccggggaccgcaccttcgccaccaccaccaccgaccccgttcactggcggaccggcgccgagggcctgccacgcggcattgttcactccaactccgacatgtacctccgccctctctgggactctggcgccaaccccaagaataaaaacgataatcacaatgctcttttggcgatggcagtcggcatttcacaaatgcagaatgtagacattatggcccgtaagtttcttaaccaaaactacacagtcatgctcttccattatgacgggaatgtagatggatggcacaatcttgagtggagtgataaggccatacacatacttgctcgtaaccaaacaaagtggtggtttgctaagcgctttctacatcctgatgttgtggctatctacggttttatctttttatgggatgaagaccttggagtggacaactttgacccgagaagatatcttgatataatggtttctgaaggattggaaattacacaacctgctctggaccctgatctatcgactgatattcaccatcggatcacaatccgcaacaagatgatgaaagtgcataggagaatatatgataaccgtgcaagtatgaattgttctgatggaagtaaaggacctccatgcacagggtgggttgagggcatggcacctgttttttctcgggctgcttggagatgtgtatggcatttgattcagaatgacctgatccatggatggggccttgacatgaagcttggttattgtgctcagggtgatcgagctgagaaggttggcgtaatcgacagtgagtatgttgttcatcaaggaataccatcgttaggaggaccatcactaagcagtaagacccctcggagatctctggatttacggacccacattagaagacaatcgtctgctgagctggagaagtttaaagagcgctggaacagagctgtaagggaagatgaagaatggacagatccttttgatacttga</cdnaseq>

Protein Sequence

<aaseq>MKPPRRRYGLLAVVVTLIVLASLQIQFHHLKEDRLTGDRTFATT TTDPVHWRTGAEGLPRGIVHSNSDMYLRPLWDSGANPKNKNDNHNALLAMAVGISQMQ NVDIMARKFLNQNYTVMLFHYDGNVDGWHNLEWSDKAIHILARNQTKWWFAKRFLHPD VVAIYGFIFLWDEDLGVDNFDPRRYLDIMVSEGLEITQPALDPDLSTDIHHRITIRNK MMKVHRRIYDNRASMNCSDGSKGPPCTGWVEGMAPVFSRAAWRCVWHLIQNDLIHGWG LDMKLGYCAQGDRAEKVGVIDSEYVVHQGIPSLGGPSLSSKTPRRSLDLRTHIRRQSS AELEKFKERWNRAVREDEEWTDPFDT</aaseq>

Gene Sequence

<dnaseqindica>131..223#356..508#725..808#950..1068#1268..1369#2570..2689#2784..2849#3062..3128#3219..3272#3941..4033#4503..4535#4629..4727#gcggatcgcgccgcgccgcactcctgtctgtctctgcactctcggactcgtctcccatccctggggcgtgggatccccttccgaccaaggcaaggcgaggcgaccacctgtcgccgccgccgccgccgccatgaagcctccgcggcgccgctatggtttactcgcggtggtcgtcactctcatcgtcctcgcctccctccagatccagttccaccacctcaaggttctctcctctctctatatctataatagcttcgccatccatttttaggtagggtattagagcatctccttctttgaggagctcctcttgcctgctatcaaaatccaacccattgatgggaacttccatcaggaggaccgtctcaccggggaccgcaccttcgccaccaccaccaccgaccccgttcactggcggaccggcgccgagggcctgccacgcggcattgttcactccaactccgacatgtacctccgccctctctgggactctggcgccaaccccaaggtctccctccctccctccctccctccctccctctctgcttgcttcttcttcttggtaatattagccttgctcagtctgggtctggttttatagtagcatcctatcctatataaccctaccacccatctctactatcatcatctgcttccagtttcaacttaacaggcgattcgtttgcccattttattgctaatgtatactctgttaattgtgcagaataaaaacgataatcacaatgctcttttggcgatggcagtcggcatttcacaaatgcagaatgtagacattatggcccgtaaggtgtgtctttatctcatatttcttcttcttgcataaaaataatatatatttcttcttcgcctttattgttttttcttatttatgttgtttggtaaaaaaaattacctattctaatatggttttaaccatttacttgtttagtttcttaaccaaaactacacagtcatgctcttccattatgacgggaatgtagatggatggcacaatcttgagtggagtgataaggccatacacatacttgctcgtaaccaaacaaagtggtaattcccacgtagcttgcattccattgctttactttttatggtaattagatatatattccctttcctcaaaagtgtagtattgagcgtccccattcttcaatatatacaagatgtaatagtcctttgctaaaatagtgcaatgttccatttcattagattttcccacttccaaagcaagcatatgttcctgctgcaggtggtttgctaagcgctttctacatcctgatgttgtggctatctacggttttatctttttatgggatgaagaccttggagtggacaactttgacccgagaaggtatggcccaggttgtaggccttctgctctaggcagatatgttattcagtgctcagtatgaagtaaaacataccatctcaccatccaagatcttgatatcagcacctctttgctagtgtacttagttcagtcaatttgaagtttcatatgctttcatgttatgtgctgcagggaactgaaattttgcttatgattcaatagtttgtcctgcgaactcttagcccctgtacagattgtgggggcctttttcagtttcccgtgggaaatgaaacggttcacgtgaaattcctgagctctaaagtctaaaacctgtgttttgttgaacaacattgataccttgggcagcacatttgccgatttatgaaatttaacatgtgttgacctttctcctgtgttcatgttctaatctcggcatcttacatgctaatgctactatgctactccctccgttccaaaatattgcaacctaggatgggtctactacgaatctggacaaagattcgtagatgagacatgctgctgaaacgtgggcagcgtttgttgttgatacgactcctgtgagttgtgacacctaatccttgcgatgatggaatggaaaaattgacacctaatcagattcgtattactaggatgggtctgatcccaggcccatcctaggttgcaatattttgggacagagggagtagtaattagtcagctatactagctcttcctgtcactgtatatagaccaaaatctgatcagccaatatgttggtagcttacaaatctactacttcctccgtttcaaaatgtaagactttctagcattgcccacattcatatagatgttaatgaatctggacataacatctgtatgaatgtgggatatatgtctagattcattaatatctatatgaatgtgggcaatgctagaaagtcttatattgtgaaacggagggagtagcatttattcagatggaagagtgtatttttcttttttagccttttgcatgaggttttgggacggagtttgttgttgatgatatatatattttggtggagcgatctttacttacttttttttgacgtaaaacagtaggagaggctcctactatgctagatctttacttactttggtcattgatgttcttgtatccgtagtatattgctcctctttttgtgctgaaagtgccttctcatttgcatgttctcttcctagatatcttgatataatggtttctgaaggattggaaattacacaacctgctctggaccctgatctatcgactgatattcaccatcggatcacaatccgcaacaagatgatgaaagtgcataggtgccatgtctttgtaattttcaattttttcacatctcaaaacgtcatttgtttttgctaataaatgcaccattcttttttaatgattatttaggagaatatatgataaccgtgcaagtatgaattgttctgatggaagtaaaggacctccatgcacagggtaaagattgtttagcctcatgagcttacttttgattctattccaagtcatattttgctgttgctgttttgttcgttggcctagagtttatctggttatctgcccttctttattttaaatcttgacacaatttatttttctaatatttagtaaccgccagatcatgggttgaatgaatgtttgagaatattgtacttttctttcttggataggtgggttgagggcatggcacctgttttttctcgggctgcttggagatgtgtatggcatttgattcaggtgcaaattctgatagtgcagtctcaatttaccctgccatctgattatattgatgttgactgaaatgttgtaactcttttcttgacgcagaatgacctgatccatggatggggccttgacatgaagcttggttattgtgctcaggtactcaagataatacacaatcatgcactacagctctatgcaagaatcatgaactgtttgatttcttttttgttattttctaggacatcctgttaaaggcattcactgatagtacaagatggcctgacaatgtttgttcatttattgtttatatccaccatcgcttgtaaaaaggtttttcacctgtgagatgtgtaagaagccacaatccaccgaattccagttaggtgttttttttggaggaaggtgctttattaattagctaggagttcacaattgacaagggattgagtataagttggagcttgcaatctccaaaacgcacaatgcctagcccttctagctttgcactaactcatgagctactaaattacaccctctactaatacaccttactatgacctgtgaaagcatctgcatcaaccctcgaatttctaaaattgtgtagttaggtgtctttttggtcctcggtttaatagttcctgtcatgttatcttctttttcttatgtatcatgtggctttgttgctactttattgctcaaatttcgccgatgtttgatctatcatctcatcattgatgaagattcatttttgttttacatagcatatgttgattgagaatgaaagtaaccaaaatattaatgaatgtagcgccatgggatttcagggtgatcgagctgagaaggttggcgtaatcgacagtgagtatgttgttcatcaaggaataccatcgttaggaggaccatcactaagcagtaaggtctgtttgtcgtcacaaattggtacttttgaaagtaaaatgatgcacctattccttacatttgtacaacatatgatcatgtcttacattccaaacattatggtacattttgatgtagcatcatatatttttatttttttaattgtaattttcatctccaagaccacaaaaatgctaagctggacctgacattagtacattacagattaaacatttccagactcagaagacaggagcatccaggcagacttgagatgccctatttgatgataatttctattccatgaaaaacaaaacttagattttagggcttcttactgtcatcttctttaacctagagtgttttaaaataaaaatagaaatttgtttggcatatgcctgcaagattataatattagtttatcacctttatcaaggctcaagaatgaaggctatacatactgttactgacctagttttctcactacagacccctcggagatctctggatttacggacccacgtgagtataattttatggtctcttgttagaccagtataacaattcggtctttgtatacttttaatttcaatcatgttactcttgtttcaatagattagaagacaatcgtctgctgagctggagaagtttaaagagcgctggaacagagctgtaagggaagatgaagaatggacagatccttttgatacttgattactttgaaagaagaatccgatacaaatatacaagcccacctgatacaaatatacaagcccacctcacattagagttgcaggacagtccacatcgattacaataattggactcgagatcatctcacatggcaatctgtgggcttcatagtaaacggtttgttacagacatttatctgactagcgttcaccattatgtcctcaagaggtgaagagccactggatacggtaccatcaacacaaggatcaaggtgcaactgaacggcaacccaaactaaccagagacttaacacagtgtcttgtaatttaatttaattcctcatttcactacgggtgtatagtgacatgatatacacacttgtgcagttatcttaatagcaagtttc</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0731900, RefSeq:Os06g0731900