Os05g0102000

From RiceWiki
Revision as of 10:02, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0102000| Description = SAM dependent carboxyl methyltransferase family protein| Version = NM_001060917.1 GI:115461564 GeneID:4337529| Lengt...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os05g0102000

Description

SAM dependent carboxyl methyltransferase family protein

Version

NM_001060917.1 GI:115461564 GeneID:4337529

Length

1836 bp

Definition

Oryza sativa Japonica Group Os05g0102000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:94475..96310

Sequence Coding Region

95119..96240

Expression

GEO Profiles:Os05g0102000

Genome Context

<gbrowseImage1> name=NC_008398:94475..96310 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:94475..96310 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgatgcagagtgcagctggagcaatggagctgctggtggcgtcgcaagaagcaggcggcgttgtggtggtgggcatgaacagtggcgacgccggagagctgagctacgccaacaactcggacatgcagcggacgatcgctgcggcgacgaggaaggagcggcaggagatggcggcggccgttcggcgcggtcggcggcaggcgagagccatagccatcgccgacctcgggtgcgccacagggccgaacgcgctgctgatggccggcgacgccgttgaggccatgctgggcgacgcggagcggcagcaggaggcggcgcctgcagagttccacgtcttcctcaacgatctccccagcaacgacttcaacagcgtgttccggcagaagcagaagctggtggtgccgagcaataatgccaatagcagccggtgcctggtgtcggcgtggccggggtccttctacgggcgcgtgttcccggcggatagcctggactacgtggtgtcgtcgtcgagcctccacttcctgtctagggcacccgcagatgcggcgcccaacgaggggaggatgtacgtgtcggcgtcgtcgagctcgagctccagctccagggtgctgcacgcctacagggctcagttccaggccgacttccgcctcttcctctcctgccgcgccgaggaggtccgccgcggaggcgtcctcctcctcaccttcgtggccaggcgggaggcggtgccctcgccgcacgactgccacctctgggacctgctcgccgaggccgccgccgacgacaggaggctcgtcgactccttcgacgcgcccttctatgggccctgcccggaggagctgagggaggccatccgcgaggaggggtccttccaggtgacgaggatggagctcttcgaggtgagccgctcccgctcatgccaatcccaagcagatctagatcagctggcggctcagacaagcagcaccatcagggcggtggttgagcctatgcttggaccacacttcgggtgggacgccatggacgccctcttccggaggtacacccacctgctccacaattactaccgccacaacaacgaccagctcaccaacgtcttcctcgccttgcacaagatttga</cdnaseq>

Protein Sequence

<aaseq>MMQSAAGAMELLVASQEAGGVVVVGMNSGDAGELSYANNSDMQR TIAAATRKERQEMAAAVRRGRRQARAIAIADLGCATGPNALLMAGDAVEAMLGDAERQ QEAAPAEFHVFLNDLPSNDFNSVFRQKQKLVVPSNNANSSRCLVSAWPGSFYGRVFPA DSLDYVVSSSSLHFLSRAPADAAPNEGRMYVSASSSSSSSSRVLHAYRAQFQADFRLF LSCRAEEVRRGGVLLLTFVARREAVPSPHDCHLWDLLAEAAADDRRLVDSFDAPFYGP CPEELREAIREEGSFQVTRMELFEVSRSRSCQSQADLDQLAAQTSSTIRAVVEPMLGP HFGWDAMDALFRRYTHLLHNYYRHNNDQLTNVFLALHKI</aaseq>

Gene Sequence

<dnaseqindica>71..1192#atgctgttgtgagtagtgattagctaggcggctattagcagcagcaaccagttctttttgcgtatgatagatgatgcagagtgcagctggagcaatggagctgctggtggcgtcgcaagaagcaggcggcgttgtggtggtgggcatgaacagtggcgacgccggagagctgagctacgccaacaactcggacatgcagcggacgatcgctgcggcgacgaggaaggagcggcaggagatggcggcggccgttcggcgcggtcggcggcaggcgagagccatagccatcgccgacctcgggtgcgccacagggccgaacgcgctgctgatggccggcgacgccgttgaggccatgctgggcgacgcggagcggcagcaggaggcggcgcctgcagagttccacgtcttcctcaacgatctccccagcaacgacttcaacagcgtgttccggcagaagcagaagctggtggtgccgagcaataatgccaatagcagccggtgcctggtgtcggcgtggccggggtccttctacgggcgcgtgttcccggcggatagcctggactacgtggtgtcgtcgtcgagcctccacttcctgtctagggcacccgcagatgcggcgcccaacgaggggaggatgtacgtgtcggcgtcgtcgagctcgagctccagctccagggtgctgcacgcctacagggctcagttccaggccgacttccgcctcttcctctcctgccgcgccgaggaggtccgccgcggaggcgtcctcctcctcaccttcgtggccaggcgggaggcggtgccctcgccgcacgactgccacctctgggacctgctcgccgaggccgccgccgacgacaggaggctcgtcgactccttcgacgcgcccttctatgggccctgcccggaggagctgagggaggccatccgcgaggaggggtccttccaggtgacgaggatggagctcttcgaggtgagccgctcccgctcatgccaatcccaagcagatctagatcagctggcggctcagacaagcagcaccatcagggcggtggttgagcctatgcttggaccacacttcgggtgggacgccatggacgccctcttccggaggtacacccacctgctccacaattactaccgccacaacaacgaccagctcaccaacgtcttcctcgccttgcacaagatttgacttcattcatcccatccttccttccttcaaccatatatatataccacattccctacagtatcagtatgtattactgtatttccaaaacgtacctacaatatataccacgtgtcagttctacgatatatatatactacccggataaaatgatagtatcgtttctaaaatcgggataccaactgtttcatgtactagacaatatttaaattcaaaactatttaagtgtatttgtgtttatgtatcttcaaaatcaatcttaaataaaattattagaactagtgagtggctttctcttgacaaatgtctcttttcatgtactattctatttatttagaatggctatatatatttaatataaatattaaattaaacttaaaaaaataaaatattatatatcccgatactacgatgcgattaaacaatccgatactactcaccttctacatgttcaaagtgtatagtacaacttccattctagcagtatattatatactagtatatatctgttcaaagtgtatagtacaacttctcttctagatgtgatcctcctatcttattataaatatgtttttattgtgtttgtgttgtaattaacatatataaatctgttgtgactggaatggattttaaacctcttgagggat</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0102000, RefSeq:Os05g0102000