Os02g0804500

From RiceWiki
Revision as of 19:25, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os02g0804500

Description

Chaperone DnaJ family protein

Version

NM_001054969.1 GI:115449308 GeneID:4331058

Length

6978 bp

Definition

Oryza sativa Japonica Group Os02g0804500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:35187495..35194472

Sequence Coding Region

35187926..35187971,35188604..35188703,35188866..35188945,35189048..35189208,35189970..35190099
,35190423..35190598,35191241..35191436,35192136..35192257,35192744..35192836
,35193040..35193108,35194139..35194429

Expression

GEO Profiles:Os02g0804500

Genome Context

<gbrowseImage1> name=NC_008395:35187495..35194472 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:35187495..35194472 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgttcgcgacctccacgctcccattcgcgccatccaacccctcgccgtcctcccgctccgccgcagcggctttctctccccgcggcggggtccacttcgccgccgctaggagcggcctcccgctcgcgtgcgccgcgccgaggcaccgagggaggcctcctccgaggaggcgccgcggagggtgcctggtggtgtgggcgtccgccgactactacgccacgctcggcgtgccgcgctccgcgagcaacaaggacatcaaggccgcctaccggaagcttgcgcgccagtaccatcctgatgtcaataaggaacctggagcaaccgataagttcaaagagataagtgcagcatatgaggtgctatcagatgaaaagaagagggcgctgtatgatcaatatggtgaagctggggttaggagtgcggttggaggctcagctggagcttacacaagtaatccttttgatctatttgagacattctttggagcaagcatgggtggcttttctggtatggaccagggaacatttaggacacgcaggaggagcactgctgttcagggggaagacatcagatatgatgtgaatctggggttctcagaggcaatatttggaacagaaaaggatattatattatctcatttggagacatgcgatgcatgtgctggttctggatcaaagattgggtcgaaaatgagaatatgctccacatgtggtggtcgagggcaagtaatgagaactgagcagacaccatttggtctgttctcccaggtttcaatttgccccacctgtgcaggagagggtgaagtcatttcagagtattgcaagaaatgtgctggagaggggcgtgttcgtgttagaaaggagatcaaagtaaaaattcctccaggtgttagcaaaggtagtactcttcgtgtacgtggtgaaggtgatgcgggaccaaaaggaggacctcctggagatctttttgtttgccttgatatagaggagccagcagatattaaaagggatggtatcaacttgtattcaactgtttcagtaagctacattgaagctattctgggcactgttaaaaaggtcagaactgttgatggaaatagtgaacttagaatacctccaggtacccaacctggtgatgtagtggttctagcaaagcaaggtgttccatcattgaataaaccatctgttcgtggtgatcatctattcactattaaggtcactatacccaaacgtataagcggacgagaaaaggagctacttgaggaactggcttctttgagcaatggtggttttgctggtgcacctgtgaagccaaaatccatacgccaagagaatgaaactactgttgcccaagaaaattcggatcaacctgatgaaggggagggtgactggttgaagaaacttcaagattttgcaggatccattgctaatggtgctgccaagtggctaaaagacaacctttag</cdnaseq>

Protein Sequence

<aaseq>MAFATSTLPFAPSNPSPSSRSAAAAFSPRGGVHFAAARSGLPLA CAAPRHRGRPPPRRRRGGCLVVWASADYYATLGVPRSASNKDIKAAYRKLARQYHPDV NKEPGATDKFKEISAAYEVLSDEKKRALYDQYGEAGVRSAVGGSAGAYTSNPFDLFET FFGASMGGFSGMDQGTFRTRRRSTAVQGEDIRYDVNLGFSEAIFGTEKDIILSHLETC DACAGSGSKIGSKMRICSTCGGRGQVMRTEQTPFGLFSQVSICPTCAGEGEVISEYCK KCAGEGRVRVRKEIKVKIPPGVSKGSTLRVRGEGDAGPKGGPPGDLFVCLDIEEPADI KRDGINLYSTVSVSYIEAILGTVKKVRTVDGNSELRIPPGTQPGDVVVLAKQGVPSLN KPSVRGDHLFTIKVTIPKRISGREKELLEELASLSNGGFAGAPVKPKSIRQENETTVA QENSDQPDEGEGDWLKKLQDFAGSIANGAAKWLKDNL</aaseq>

Gene Sequence

<dnaseqindica>6502..6547#5770..5869#5528..5607#5265..5425#4374..4503#3875..4050#3037..3232#2216..2337#1637..1729#1365..1433#44..334#cggctctagaagcttctagaaggcgcagctgcagcgctggctaatggcgttcgcgacctccacgctcccattcgcgccatccaacccctcgccgtcctcccgctccgccgcagcggctttctctccccgcggcggggtccacttcgccgccgctaggagcggcctcccgctcgcgtgcgccgcgccgaggcaccgagggaggcctcctccgaggaggcgccgcggagggtgcctggtggtgtgggcgtccgccgactactacgccacgctcggcgtgccgcgctccgcgagcaacaaggacatcaaggccgcctaccggaagcttgcgcgccaggtgctcgacgcttgtcccctcccgcaccaagcttcaattttactcgtctttataggagtactgtagtttttggattgctttctttatggacgatgtcgtacggttgagagtacacaatcaccaatactggaattcgttggatacttggatcacacaactgaaattattctgtttctgatagtgtatgcgatagttgccgtattacggtattagatcagctctgtgcacatctgagaaggcctcattttgttcgctattgacttcttttgtttggataaagtatgacatttagccatgacttttagaagaactttctgtgatattatcaaatgatgccctcatcacagtgttccggttctccttttagggttaggacacctttgtcactggttctagcagtattgacgctgacaccttcaactctgaaaatcccaatgccatcctcagtggatgaatggcatgagcgtgccatgctggagcaaccaacattggtgccagttgctgcaacactggtcagcaggattctggaatctggaccatgtactatgttgctctgccatctaggacaaagcctagacatctgatccgaaattcgtgcattcaatcatgtgcttttgctagtttgtaaccatcggagcgtatagctgggtttggagcaaaaaaggcaaactggaataatataattgcaaacaaagtaagacctctgaaggttccctttgtttctgtcacctgctttgggctgaactagggaactgtcataaccttagaagcctacatacaaaaagcaggcttttgaacctacgagagggtcttatttggagcttagctaatgcttcaaatacccttcagaccaagtcctcgaggttttactgagctgattttcatggctactaatttactatgggatttatatactttaccaagtggcatgtttttactcttaacatcaagctgctaagattcacacaacatgcacacttctattttaatagataagagttattgataacatcttcgcttttgtttttagtaccatcctgatgtcaataaggaacctggagcaaccgataagttcaaagagataagtgcagcatatgaggtatccaattcagcataatttgttaattcatgtatttgtctgcttttttacttgtatttaatattgctgataagttatagacttttactattgacatgtggatttttttttttgctgtaatagtttacaacgtcactgcttctggtttctctgttttgtgtttcatttccctctttataagtgcttaatttcattgtcatcaggtgctatcagatgaaaagaagagggcgctgtatgatcaatatggtgaagctggggttaggagtgcggttggaggctcagctggagcttacacagtatgacagctttgcttttcaacttaattttttctatcagcacttactccctccatcccaaaatataagggataatgcccttttcatttgtcccaaaatataaaagatattaaatgtagcacaatagcttttgtactagttattctccacctagcaccttttgtactagtttattccccacctgtcaacttttgtactagtttattccttaactactaactttcgtatcacttttttatggatttgacggatgtatttgcccttttgctacttccttattttttgtgaaaaaaatggcataatcccttatattgtgggatagaggccgtacaaggcaatatattgagtgtgattatataattatatgtgtactagctaaaattctttggctaataaggatactagattttgcttattgactagtattgtttacccttttcgctcacagatggcttcagttctttacctgttattttctatatgcagagtaatccttttgatctatttgagacattctttggagcaagcatgggtggcttttctggtatggaccagggaacatttaggacacgcaggaggagcactgctgttcagggggaagacatcaggttctgttgccagatattcatggtcaatgtgtttatctagttgaaatgatcagctaaagctgtttaaatagcatatgaatagcagcactaattattgtagttgttacaaactttaaaaccaatttggtatgtatgcctcggagatctagcattatttgcatacatctcaatctagataaggtattcatacaactttaatgctattttctacctttcccatcgtttatcttccctctgttgccagtatttacgagtgagcacccacactagctattcccttcttaacacccacattagctattcccacattgttccaaagacatggcactaggatatcatggttgtttgccactaccattatcttggtcttataactccccttatgcccatgcttggtcaaaatacagcttacagaaatagcatgtttgggcaacaatgttgattcattctctgtgccaaatgtttcttttttggttcctgtttgtgttttgccttttcgcaaaagctactaatacctaagttcaaacatttctgatattggtattttttttttcttgtgatctttttttttttctgcaaacaaaccagggataccagaccagcagattcttatacaaaattgttcttgctaaaattctcttatcattttgtgataaaaactagtgtactttatagactgacatgaacttataccatcagatatgatgtgaatctggggttctcagaggcaatatttggaacagaaaaggatattatattatctcatttggagacatgcgatgcatgtgctggttctggatcaaagattgggtcgaaaatgagaatatgctccacatgtggtggtcgagggcaagtaatgagaactgagcagacaccatttggtctgttctcccaggtaatagcattcataatattattccagtgctttaccatgaaaacatctggcgataatgtgacagcttttgtcaggtgccatatgtgaaaatgaacattaaacagaacagtagaagatcagaatcaatactataaacaagatctcatggaactacaaaatatattttcaagatatactaggatgtgaacagttttttgttagacaaatataatggtgtaaaatatacataagtggcaaacatatagatcaatgagaagggaaaaggggttaaatctattcctagcttcatcattgcttagtaagaatattagctgtattaacttggttgttttctcactactgattctttattattattaatttataatggataaattaaaacagatcaaaacaactgaagaagaaaatatttactaatttttctatcattgaaaagatataggtaaccgaaatacgtattcaagcacagtagaatatacaggctttgctttttacaagattgttgaagactcgatacgtaaccgaaatataaatatttatagcattagggtggcctgtgtatctaattatctatgcaaacgttttagttcatttgatacttattacatatgtgattaacttctaatatttcttgttttgtaggtttcaatttgccccacctgtgcaggagagggtgaagtcatttcagagtattgcaagaaatgtgctggagaggggcgtgttcgtgttagaaaggagatcaaagtaaaaattcctccaggtgttagcaaaggtagtactcttcgtgtacgtggtgaaggtgatgcgggaccaaaagggtgagtgattcgtttgttatttatcttgtctatacttcatacttgaatatgttaaggcactcaccagtgaaaattgtggtttgtggatattggtcctagaggcaaataaatagatcattggcatcctcatagtattttctggtgctttagcttctgcatgcacatgcgctcttgcttttgccttcatcctctttattgtcttattttactacaccaccctcctctgtctgccttctatatactttttgtgtgcatgcacaaataatccatgtgtaaatgctattaaaaaaaatgcctaaaccctttttgcatttggaaagcagaggacctcctggagatctttttgtttgccttgatatagaggagccagcagatattaaaagggatggtatcaacttgtattcaactgtttcagtaagctacattgaagctattctgggcactgttaaaaaggtaaaatttttcttgttatgattcaaaattgtgatatttagtttgggttgaagcccattgccattcttcattaatgagagtacaactaataggaaatgaatgcctgaaccatctcactttttagtaacggagaatactaacatgcaaaaactgagttttgtgttctgagttctgaccacattggttgtgtataggatgtttggtatatattgttgattgactctattggtctgcctgagcgttttttatatactctgttttcttgtgataagaaaacacctacctttatgcacaatgattagcaaaccaaacaggcagtattttaagtcatattcctagaggtacaccaacttgatcttaatctgctgttaccttttttgttaagataaatttgattacacgataatcagatcattttgttgatttgacctaatccaaaaccataggatgtaatgtgcctgacttctaattgaggccagcatttcattgggattaaatttatatcagcttattgttaatcattttagctcagactaattaaccaatgctgcagctatgttatcctaggtctgatcaaatttgtttatctgagactgatttgagttttgaaccttttctaacaaccatggcagttcagatcaaagttaattatttgtacatatttattttagatttgagagaaagcatgtccttgtaatgattcttgtggtctatagtctactggcatttctgtcttatgctcatattcttcttccaagcaggtcagaactgttgatggaaatagtgaacttagaatacctccaggtacccaacctggtgatgtagtggttctagcaaagcaaggtgttccatcattgaataaaccatctgttcgtggtgatcatctattcactattaaggtcactatacccaaacgtataaggttatatgcttcctgacttgaacctactttcgaatacatactgttggtctaaatctacataatcactgagcccatatctctgtgaatttgtgttccttccagcggacgagaaaaggagctacttgaggaactggcttctttgagcaatggtggttttgctggtgcacctgtgaagccaaaatgtaagcaagcttagctatatcccccaccctcccctcttccctccctccctctccagcaaagaattcattctcatattctaacgttactatcgaagtttgatgaattttttatttttaggaactagccttggaaggtactaacgatttgcatttgcattgcagccatacgccaagagaatgaaactactgttgcccaagaaaattcggatcaacctgatgaaggggagggtgactggttgaagaaacttcaagattttgcagggtaaatattagctgtttcttattacaatgcaattgagttctgggagggtttacctcatacattcatgcatcatattgcaaattttgggaacttgatcatttgtaaaaaaaatgcaaggaagtataggttatagtgagaaagaaagagagctgtatattacacttaaaaaagttagtgttataaccaacctttatacattttcattgatcttctacatgtttttctaaagataagttactgagatagtgaatccacatcagcaaaatgtttttgttacactgaacatatagttaatacttttcctcttttgctgtttggggcagctgaagtttttgaaaatatgctctttcagtaatgatccataatgaggtaaaactgttgttacaggacctcctttacagcaggttgtagcctgtctaactctgttggttgcattcatttttacttctaatattgattagtgcaacccttgttccaaaaatgaatagaaggaaaaatgctaactgacggtctcaatatacatacttgcttctattgaagtttgaaaatacaaattgtggatttctttgtttctctatcctatgcaattctgcattcttttgttgatcatgttgcttactgaattctttcagatccattgctaatggtgctgccaagtggctaaaagacaacctttagcctgtaaatagttaccgcggaatgcatttatattaatcgctgttatggtgtagtccaatctgctattcttcaattcattggatcccacgagctgttgcatttgttttggagaggctcaaagttctcaggctgtgaagtggcaacgaagaggctgaatctgttaattaattccatcggcaacgttcttattttggtatgcttgtaaagtggcatgattttttatgtagttgcagttatcattccctagagcatgtgatggttttacgtcacttgctgctgatactgaattcagtaaagataatgcactgtaaatatatatttcatgcagtagagcatcttgaaatctcaggtatgtactctgtgggtaagcaaccgtgaggtgtgtcgttctgaactagagatatttaaatccagaacaagagcacccatat</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0804500, RefSeq:Os02g0804500