Os09g0525400

From RiceWiki
Revision as of 07:32, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os09g0525400| Description = Similar to RING finger protein 13 (C-RZF)| Version = NM_001070254.1 GI:115480250 GeneID:4347629| Length = 3575 bp| ...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os09g0525400

Description

Similar to RING finger protein 13 (C-RZF)

Version

NM_001070254.1 GI:115480250 GeneID:4347629

Length

3575 bp

Definition

Oryza sativa Japonica Group Os09g0525400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:21360290..21363864

Sequence Coding Region

21360834..21360869,21361146..21361254,21361381..21361505,21362462..21362506,21362656..21362720
,21362843..21362987

Expression

GEO Profiles:Os09g0525400

Genome Context

<gbrowseImage1> name=NC_008402:21360290..21363864 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:21360290..21363864 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcaactccaaatacctattcagtccatatctcctcagaaacccacaggattgaggcctggttggcatctgatgaagctttagctaggcagttgcaagaggaggagaatgcacatgatgctattgctacaagagaatttgctggtaacgcatccttggaaccatcgtcaccagctgttgagtacagacctcccaataatgcagctcaggttgcaacggaagacaatgttgaccctgataatatgtcttacgagcaactacaagcattaggggaagcagtaggaaatcaatccagaggattatctgatgacctgatatgctatttggtgccttttaagaacaaatgcagcttcttctccaggaagaagaatgatgaggaatgtgtgatctgtaaatcgacttataaaagccgacagaaattgataagattgccctgcagccactgttaccatgcagattgcataactcgctggcttaagatcaataaggcatgcccagtctgcaatgaggaggtatttgggtga</cdnaseq>

Protein Sequence

<aaseq>MATPNTYSVHISSETHRIEAWLASDEALARQLQEEENAHDAIAT REFAGNASLEPSSPAVEYRPPNNAAQVATEDNVDPDNMSYEQLQALGEAVGNQSRGLS DDLICYLVPFKNKCSFFSRKKNDEECVICKSTYKSRQKLIRLPCSHCYHADCITRWLK INKACPVCNEEVFG</aaseq>

Gene Sequence

<dnaseqindica>2996..3031#2611..2719#2360..2484#1359..1403#1145..1209#878..1022#gaagagagaggtgagagaggaggaggaggcggactcgccggagccggaggttgccggaggcggcggcggcggcggcatcgcgctcttctccttcgctgcttctccggggaaagaggcaaggtagtagttcgcatccatctgagttctctcctttcgtttgctctgggagagggagcgatctctccttccttggtttgttcttggtttgagtgcttcgtttcttgattggaaagtgggagagagaagaaagttcgcacctttgtggcgaaaaaaaaatctcactttttgtttgtgcaaagaaaaattctctctttttggttggtcgtgtgacatgtgggttcgtggcaattggaaaggcagaagaatctcgtgtgcctgcgagctgtatctctccgagtaatgtcaatcaaatgaatgttctgatggaggattgttcagttgtatttgggggaatgacgtccccttttcacacatttatgtcagtcctgttcaggtgaaactggatggtgctttactagtagctgtgtacatttgggagcatctaaatttggggaaactgtttataaatttgaacaatgttcgataaattttaaattgtagttactaatttaaagagtcaaatttatatgcatttacatggagccatggaggatgtggtattctaatagagcatcaggcacagtggtcagtggggacattgtagtatggaaattacaggaagtgtaggttgcacattcctgcttctggtggaagcatgaacatctaatctgagtttttttctgaattaagatggattcttagacaggttctgatttgtaatgtttgatttacttgatgtattgtcagtgttaattagcaaatcattgcaggttcatcaatggcaactccaaatacctattcagtccatatctcctcagaaacccacaggattgaggcctggttggcatctgatgaagctttagctaggcagttgcaagaggaggagaatgcacatgatgctattgctacaagagaatttgctggtatagtgctactcccacataccacatgttcaccattttttttgctttgtttgaggtgcattcattagctgtactcaactggcatctacacttaccacatgttcatgatgcattttttttaggtaacgcatccttggaaccatcgtcaccagctgttgagtacagacctcccaataatgcagctcaggtttgttgcttttgtactctaatgtttcctccattgtttcataggaatcatctacaccttccagtggaaagggattccacttccacatatatgaactttgtatggaaggggtcccagaatgtctgaattccacacgtttgtatttgcaggttgcaacggaagacaatgttgaccctgataatatgtcttacgaggtatgttgctatacttttaccaaacggacaatacaaattataaaattctcctttgctataggatttcgaaaagtgtacttcctcaaacaatactccatgatgaaaccaatcttacatacagaggagagaaaagaaaaattggtttggacaaaatgggaatgcatttattagatatcgtcgattgtcaattatttatgaaatgataaagctatcaagagttacaagtgtttgtaaacatatattggtggttttctaattttttgcagatatattaaaaatgtgctgcatatatacttttctcacacacaattcatgttttctgctacaatgaaccatctttagggattgtgtttactacctatttaaaggttcattggcaacaagttctctcattcttccttttgtgagttaatgtcaaaatcaatcagatatattccaattttctctttggaacaaaatgaaatgagtgccatgcagaagactgctgaatgtgctacttatattgaaacaactcatatgcaaagaggttatacagtttttatctagcactaagtaattgtcgagtcacctacatttgttgatatgaagagccaacacaaatgttgatattttccaaaaatcaactgaaacgtcgaatttgaaatcaagttgtagaaaagggtaagaaggatgtgctcatttcaaacaataggagaactgtaaactatagaaacttgaagtcttaaggacactacactaaccctgaagtcactcgccatcataagcaaagtgccaacattatctgtctggaatctggactcgtcatttaggggctctttggctaggcagcagctgtatgtttcagctttagagttgtccttagaatccatctcattgagaaagcgtacttcaattgaaatctataacttcctcgcattctgggaagttcgtttttttattgtctacaatttttgtagcaactacaagcattaggggaagcagtaggaaatcaatccagaggattatctgatgacctgatatgctatttggtgccttttaagaacaaatgcagcttcttctccaggaagaagaatgatgaggagtatgtgccagttaatttacttccaatcatcctttttttttaattttaaacgtggcataatcattagtgctaaggcatgttttaagttgtctgacaagcatacaactatatgatatctatgtgcagatgtgtgatctgtaaatcgacttataaaagccgacagaaattgataagattgccctgcagccactgttaccatgcagattgcataactcgctggcttaagatcaataaggtaaaatatactactttatacttgatgttgtacctccaaaatgcaaaagaagtttctgtattctgtgtatagatgctaaatgctaatatatgcgaacaagagtacctgtaacgtctgaatattactcaagaaattcgatacatagaatgtgatacattgtctgaactctgtctgatgggccgaatgttgattgctttgtatacaaacttgccttgtctagtataggaagattatcccatgtattctggatctgattttatgtctgttttcattcaggcatgcccagtctgcaatgaggaggtatttgggtgaatcacagcgcttgtggcaacgctggtgatgtttgcgttgtgttcagacacgttatgctcctacaccctatgctatacaccggtgctcaaggaaaatgcgttttggtatactcgtactactaactgaaccatgccatggcccatggctgtgatgtgtccatccaactgagttttatcacaaatagataaatctgtgtgtgtactagtactatggttgccatttttctggtaatgcaacctagcagaagcagctaaatagatactctatgtattgcgccatcttttacatgatctctgctgtggaaagaagcacaattgtgaatgttctacacccctactctgccatcttcagttaattcagcaatactgcatttgctctacagcttgtgtgtgtacagtgaacatggttctttcagccaaaacttttgttagcatatagtgatgttcttttcttttcctttcttattttgtaaggtagatgaagcagacatatcataaaccacagtcagaaactttccagcaaaaaggaaaaggcttatgttagt</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0525400, RefSeq:Os09g0525400